FFCP PHASE1:Hg19::chr2:54785553..54785567,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=6711 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11275 | |||
|TSSclassifier=strong | |||
|UniProt=Q01082 | |||
|association_with_transcript=22bp_to_ENST00000333896,NM_178313,uc002rxx.2_5end | |||
|description=CAGE_peak_7_at_SPTBN1_5end | |||
|id=chr2:54785553..54785567,+ | |||
|ontology_enrichment_celltype=CL:0000066!6.51e-21!254;CL:0000003!4.67e-09!722;CL:0002076!4.30e-08!43;CL:0000063!5.99e-08!578;CL:0000223!6.13e-08!59;CL:0000791!3.18e-07!18;CL:0000789!3.18e-07!18;CL:0002420!3.18e-07!18;CL:0002419!3.18e-07!18;CL:0000790!3.18e-07!18;CL:0000084!6.99e-07!25;CL:0000827!6.99e-07!25;CL:0000076!8.82e-07!62 | |||
|ontology_enrichment_celltype_v019=CL:0000791;2.15e-07;18!CL:0000789;2.15e-07;18!CL:0002419;2.15e-07;18!CL:0002076;3.03e-07;42!CL:0000084;3.98e-07;25 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,1.02e-20,253;CL:0002076,1.20e-08,42;CL:0000223,2.00e-08,58;CL:0000791,1.90e-07,18;CL:0000789,1.90e-07,18;CL:0002420,1.90e-07,18;CL:0002419,1.90e-07,18;CL:0000790,1.90e-07,18;CL:0000084,3.29e-07,25;CL:0000827,3.29e-07,25;CL:0000542,8.59e-07,53;CL:0000051,8.59e-07,53 | |||
|ontology_enrichment_development_v019=CL:0000790;2.15e-07;18 | |||
|ontology_enrichment_disease=DOID:305!4.92e-12!106;DOID:162!1.04e-10!235;DOID:14566!4.18e-10!239;DOID:0050687!1.92e-08!143 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:305,3.94e-12,106;DOID:162,2.17e-11,235;DOID:14566,8.12e-11,239;DOID:0050687,1.90e-08,143 | |||
|ontology_enrichment_uberon=UBERON:0004119!3.11e-11!169;UBERON:0000925!3.11e-11!169;UBERON:0006595!3.11e-11!169;UBERON:0001007!8.41e-09!155;UBERON:0001555!8.41e-09!155;UBERON:0007026!8.41e-09!155;UBERON:0000077!1.74e-08!130;UBERON:0001004!1.50e-07!72;UBERON:0004921!1.62e-07!129;UBERON:0004185!1.62e-07!129;UBERON:0001041!5.46e-07!98 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004119,3.81e-10,160;UBERON:0000925,3.81e-10,160;UBERON:0006595,3.81e-10,160;UBERON:0001007,5.78e-08,145;UBERON:0001555,5.78e-08,145;UBERON:0007026,5.78e-08,145;UBERON:0001004,3.55e-07,74;UBERON:0004921,5.89e-07,118 | |||
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| |||
|short_description=p7@SPTBN1 | |||
}} |
Revision as of 03:10, 21 January 2014
Short description: | p7@SPTBN1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_7_at_SPTBN1_5end |
Coexpression cluster: | NA |
Association with transcript: | 22bp_to_ENST00000333896, NM_178313, uc002rxx.2_5end |
EntrezGene: | SPTBN1 |
HGNC: | 11275 |
UniProt: | Q01082 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 1.02e-20 | 253 |
endo-epithelial cell | 1.20e-08 | 42 |
endodermal cell | 2.00e-08 | 58 |
mature alpha-beta T cell | 1.90e-07 | 18 |
alpha-beta T cell | 1.90e-07 | 18 |
immature T cell | 1.90e-07 | 18 |
mature T cell | 1.90e-07 | 18 |
immature alpha-beta T cell | 1.90e-07 | 18 |
T cell | 3.29e-07 | 25 |
pro-T cell | 3.29e-07 | 25 |
lymphocyte | 8.59e-07 | 53 |
common lymphoid progenitor | 8.59e-07 | 53 |
Ontology term | p-value | n |
---|---|---|
endoderm-derived structure | 3.81e-10 | 160 |
endoderm | 3.81e-10 | 160 |
presumptive endoderm | 3.81e-10 | 160 |
digestive system | 5.78e-08 | 145 |
digestive tract | 5.78e-08 | 145 |
primitive gut | 5.78e-08 | 145 |
respiratory system | 3.55e-07 | 74 |
subdivision of digestive tract | 5.89e-07 | 118 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 3.94e-12 | 106 |
cancer | 2.17e-11 | 235 |
disease of cellular proliferation | 8.12e-11 | 239 |
cell type cancer | 1.90e-08 | 143 |