FFCP PHASE1:Hg19::chr3:12392991..12393030,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=5468 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9236 | |||
|TSSclassifier=strong | |||
|UniProt=P37231 | |||
|association_with_transcript=0bp_to_NM_015869,uc003bww.1,uc003bwx.2_5end | |||
|coexpression_cluster_id=C29 | |||
|description=CAGE_peak_7_at_PPARG_5end | |||
|id=chr3:12392991..12393030,+ | |||
|ontology_enrichment_celltype=CL:0000860!7.02e-36!45;CL:0002194!5.02e-35!63;CL:0000576!5.02e-35!63;CL:0000040!5.02e-35!63;CL:0000559!5.02e-35!63;CL:0002057!2.40e-34!42;CL:0002009!1.38e-33!65;CL:0000839!2.37e-30!70;CL:0000557!9.28e-30!71;CL:0000766!1.14e-28!76;CL:0002087!5.70e-16!119;CL:0000763!9.92e-16!112;CL:0000049!9.92e-16!112;CL:0000136!1.11e-15!15;CL:0002031!6.31e-14!124;CL:0000738!1.11e-12!140;CL:0002032!1.80e-08!165;CL:0000837!1.80e-08!165;CL:0000037!2.63e-08!172;CL:0000566!2.63e-08!172;CL:0002521!2.21e-07!3;CL:0000988!2.70e-07!182 | |||
|ontology_enrichment_celltype_v019=CL:0000860;5.57e-53;33!CL:0002057;5.57e-53;33!CL:0000473;6.68e-40;39!CL:0000234;6.68e-40;39!CL:0000136;2.69e-34;13!CL:0000576;5.78e-23;48!CL:0000766;2.72e-15;69!CL:0002521;1.69e-12;3!CL:0002617;2.29e-08;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,5.72e-44,42;CL:0002057,5.72e-44,42;CL:0000473,4.00e-41,48;CL:0000234,4.00e-41,48;CL:0002194,3.31e-37,59;CL:0000576,3.31e-37,59;CL:0000040,3.31e-37,59;CL:0000559,3.31e-37,59;CL:0002009,8.80e-36,61;CL:0000839,1.36e-32,66;CL:0000557,5.17e-32,67;CL:0000136,1.69e-29,15;CL:0000766,2.39e-29,72;CL:0000763,2.06e-17,108;CL:0000049,2.06e-17,108;CL:0002087,5.82e-16,115;CL:0002031,4.97e-15,120;CL:0002521,1.62e-12,3;CL:0000738,1.63e-12,136;CL:0002032,1.32e-09,161;CL:0000837,1.32e-09,161;CL:0000037,5.94e-09,168;CL:0002617,1.74e-08,2;CL:0000988,3.42e-08,177;CL:0000134,2.57e-07,354;CL:0002320,5.27e-07,361 | |||
|ontology_enrichment_development_v019=CL:0002057;5.19e-35;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!4.19e-25!80;UBERON:0001474!1.50e-22!86;UBERON:0002405!2.24e-21!115;UBERON:0002390!1.81e-19!102;UBERON:0003061!1.81e-19!102;UBERON:0004765!1.34e-18!101;UBERON:0001434!1.34e-18!101;UBERON:0002193!1.16e-17!112;UBERON:0002204!1.58e-11!167;UBERON:0003081!2.86e-09!216;UBERON:0000926!7.89e-09!448;UBERON:0004120!7.89e-09!448;UBERON:0006603!7.89e-09!448;UBERON:0002190!2.21e-07!3 | |||
|ontology_enrichment_uberon_v019=UBERON:0002190;1.69e-12;3!UBERON:0002072;1.20e-07;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,1.83e-27,76;UBERON:0001474,5.52e-25,82;UBERON:0004765,3.45e-22,90;UBERON:0002405,2.90e-21,93;UBERON:0002390,7.54e-20,98;UBERON:0003061,7.54e-20,98;UBERON:0001434,2.53e-19,100;UBERON:0002193,2.06e-17,108;UBERON:0002190,1.62e-12,3;UBERON:0002204,6.39e-10,167;UBERON:0003081,1.65e-09,203;UBERON:0002072,1.17e-07,5;UBERON:0002384,3.22e-07,371;UBERON:0000926,4.20e-07,315;UBERON:0004120,4.20e-07,315;UBERON:0006603,4.20e-07,315 | |||
|phase1_expression=1.99846217197612,12.417830385677,5.49722175974288,0,4.46961094427288,0,12.6649939084155,4.42203911398782,20.1112933713876,0,0,0,0,0,0,0.672325146451775,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.464448369948228,0,0,0,0,0,0,0,0.200544447470142,0,0,0,0,0.872389432677388,4.1566353805769,0.485168122375632,6.0431549595478,3.70051099219643,8.981484755958,2.01384674625505,2.0492856522328,3.07426898855161,6.55016793399575,7.10033151942209,2.70852973188684,4.32957380947991,1.91034305040492,4.04502272001152,7.03992952453076,4.8139354061414,3.83602275479425,0.329851300186716,1.39624560335142,0,1.16083695451434,1.13477044938228,0.622822248995575,4.01997864410789,3.12889751052121,4.56096573880745,0,2.20966581592539,1.89877432464531,0,0,0,0.112328631146495,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.589405839739707,0,0,1.29818957461873,0.696518949197069,1.86141144726411,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150238058906597,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.118306800039844,0,0,0,0.217879444092406,0,0.134831308160164,0,0,0,0,0,0,0,0.982827216677626,1.77236972004421,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.57404691653161,0.445893486866185,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.4214489204541,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.197030760201927,0,0.128343036279748,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.03473071292505,0,0,0,0,0,0,0.647142602455851,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116210378459959,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.309123034943167,0,0,0,0,0,0,0.308097234229289,0.307007349452259,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.42793898803392,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.282431402330337,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.307240764308458,0,0.333698283423817,0,0,0,0,0,0,0,11.4276379832077,0,0,0,0,0,0,0,0,0,0,0,0.398495976502139,1.10513566212459,0,0,0,0,0,0,0,0.394573622547734,0,0,0.969332746095218,0,0,0,0,7.97499532978273,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.995261931078505,1.06149077404007,0,0,0,0,0,0.802577647298789,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.365446585430928,0.246346371159628,0,0,0,0,0,0,0,0,0.213452994739353,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.837847203816763,3.66656678418694,0,0,0.429226048136571,0.223171457441873,0.0671834724867263,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0524545881349981,0,0,0,0.714695326373367,0.662091970365432,0,0,0,0,0,0,0,0,0.146552233678082,1.32506888912221,0,0,0.171086837884329,0,1.9221734262185,0,3.31391244277756,0,0,0,0,46.7855310897748,76.4604176769235,47.1772188215731,59.3449461584746,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138258436151731,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0691572524642179,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.96211178389294,0,0,0,0,0,0,0,0,0.171488009437418,0,0,0,0.111231401892069,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.430227358820278,0,0,0,0,0.31020638566432,0,0,0,0,0,0,1.1598144313382,5.82853191670967,0,0,0,0,0,0,0.0771741581079447,0,0,0.245148321753905,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.70587185520785,0.714193294391221,0,0.124149428591716,0,0,0.404234377916439,1.30630048738177,0,0.0673520530145875,0.430333232356058,0,0,0,0,0,2.34640942403454,0,0,0.665756774185513,4.22674966541155,0 | |||
|short_description=p7@PPARG | |||
}} |
Revision as of 17:26, 21 January 2014
Short description: | p7@PPARG |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_7_at_PPARG_5end |
Coexpression cluster: | C29_mature_adipose_Adipocyte_breast_Lymphatic_vein_heart |
Association with transcript: | 0bp_to_NM_015869, uc003bww.1, uc003bwx.2_5end |
EntrezGene: | PPARG |
HGNC: | 9236 |
UniProt: | P37231 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 5.72e-44 | 42 |
CD14-positive, CD16-negative classical monocyte | 5.72e-44 | 42 |
defensive cell | 4.00e-41 | 48 |
phagocyte | 4.00e-41 | 48 |
monopoietic cell | 3.31e-37 | 59 |
monocyte | 3.31e-37 | 59 |
monoblast | 3.31e-37 | 59 |
promonocyte | 3.31e-37 | 59 |
macrophage dendritic cell progenitor | 8.80e-36 | 61 |
myeloid lineage restricted progenitor cell | 1.36e-32 | 66 |
granulocyte monocyte progenitor cell | 5.17e-32 | 67 |
fat cell | 1.69e-29 | 15 |
myeloid leukocyte | 2.39e-29 | 72 |
myeloid cell | 2.06e-17 | 108 |
common myeloid progenitor | 2.06e-17 | 108 |
nongranular leukocyte | 5.82e-16 | 115 |
hematopoietic lineage restricted progenitor cell | 4.97e-15 | 120 |
subcutaneous fat cell | 1.62e-12 | 3 |
leukocyte | 1.63e-12 | 136 |
hematopoietic oligopotent progenitor cell | 1.32e-09 | 161 |
hematopoietic multipotent progenitor cell | 1.32e-09 | 161 |
hematopoietic stem cell | 5.94e-09 | 168 |
adipocyte of breast | 1.74e-08 | 2 |
hematopoietic cell | 3.42e-08 | 177 |
mesenchymal cell | 2.57e-07 | 354 |
connective tissue cell | 5.27e-07 | 361 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 1.83e-27 | 76 |
bone element | 5.52e-25 | 82 |
skeletal element | 3.45e-22 | 90 |
immune system | 2.90e-21 | 93 |
hematopoietic system | 7.54e-20 | 98 |
blood island | 7.54e-20 | 98 |
skeletal system | 2.53e-19 | 100 |
hemolymphoid system | 2.06e-17 | 108 |
subcutaneous adipose tissue | 1.62e-12 | 3 |
musculoskeletal system | 6.39e-10 | 167 |
lateral plate mesoderm | 1.65e-09 | 203 |
hypodermis | 1.17e-07 | 5 |
connective tissue | 3.22e-07 | 371 |
mesoderm | 4.20e-07 | 315 |
mesoderm-derived structure | 4.20e-07 | 315 |
presumptive mesoderm | 4.20e-07 | 315 |