FFCP PHASE1:Hg19::chr3:156415226..156415230,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport= | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=not | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr3:156415226..156415230,+ | |||
|id=chr3:156415226..156415230,+ | |||
|ontology_enrichment_celltype=CL:0002057!6.48e-20!42;CL:0000860!2.09e-19!45;CL:0002087!1.66e-18!119;CL:0000738!1.56e-17!140;CL:0002031!1.69e-17!124;CL:0002009!2.18e-16!65;CL:0000557!9.82e-16!71;CL:0002194!2.15e-15!63;CL:0000576!2.15e-15!63;CL:0000040!2.15e-15!63;CL:0000559!2.15e-15!63;CL:0000839!3.50e-14!70;CL:0000766!1.96e-13!76;CL:0002032!1.86e-12!165;CL:0000837!1.86e-12!165;CL:0000037!3.74e-12!172;CL:0000566!3.74e-12!172;CL:0000988!4.74e-10!182;CL:0000763!5.47e-09!112;CL:0000049!5.47e-09!112 | |||
|ontology_enrichment_celltype_v019=CL:0000860;3.53e-39;33!CL:0002057;3.53e-39;33!CL:0000473;1.13e-28;39!CL:0000234;1.13e-28;39!CL:0000576;1.63e-21;48!CL:0000766;8.06e-14;69!CL:0002087;5.47e-09;104!CL:0000738;9.59e-07;136 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,6.73e-40,42;CL:0002057,6.73e-40,42;CL:0000473,1.35e-35,48;CL:0000234,1.35e-35,48;CL:0002009,1.43e-28,61;CL:0000557,2.89e-28,67;CL:0002194,3.00e-26,59;CL:0000576,3.00e-26,59;CL:0000040,3.00e-26,59;CL:0000559,3.00e-26,59;CL:0000839,1.89e-25,66;CL:0002031,5.88e-25,120;CL:0000738,1.21e-24,136;CL:0002087,3.78e-24,115;CL:0000766,6.24e-24,72;CL:0000037,5.85e-17,168;CL:0002032,1.45e-16,161;CL:0000837,1.45e-16,161;CL:0000988,2.50e-15,177;CL:0000763,3.32e-15,108;CL:0000049,3.32e-15,108;CL:0000134,1.09e-08,354;CL:0002320,3.53e-08,361;CL:0000219,1.17e-07,386 | |||
|ontology_enrichment_development_v019=CL:0002057;6.41e-30;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:1749;4.28e-08;14 | |||
|ontology_enrichment_disease_v019_2=DOID:1749,5.31e-08,14 | |||
|ontology_enrichment_uberon=UBERON:0002371!2.86e-12!80;UBERON:0001474!1.84e-11!86;UBERON:0002390!2.44e-10!102;UBERON:0003061!2.44e-10!102;UBERON:0004765!3.83e-09!101;UBERON:0001434!3.83e-09!101;UBERON:0002193!6.10e-08!112;UBERON:0002405!2.21e-07!115 | |||
|ontology_enrichment_uberon_v019=UBERON:0003343;3.32e-07;4!UBERON:0004785;3.32e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,4.33e-25,76;UBERON:0001474,9.51e-24,82;UBERON:0004765,1.39e-20,90;UBERON:0002390,3.23e-20,98;UBERON:0003061,3.23e-20,98;UBERON:0002405,1.73e-19,93;UBERON:0001434,2.02e-18,100;UBERON:0002193,3.17e-17,108;UBERON:0002384,5.85e-08,371;UBERON:0003081,1.74e-07,203;UBERON:0002204,3.10e-07,167;UBERON:0003343,3.86e-07,4;UBERON:0004785,3.86e-07,4 | |||
|phase1_expression=0.181678379270557,0.214100523890983,0.422863212287913,0,0.893922188854576,0.872338524100369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.286235987131057,0.273748850145768,0.125542639594803,0.152826811495903,0.0821005894499457,0.0787107813136792,0.786728553697808,0.383829398097213,1.70297735647684,0.919421224478927,0,0.369754010166788,0.232401601740905,0.142169232487422,0,3.32397245119126,3.40925560699241,2.38711957787437,0.223915474239924,0,0,2.90796477559129,1.13362783106643,4.60909716256851,3.0215774797739,6.98985409637104,5.57471467611186,4.31538588483226,7.42866048934392,3.31075121844019,5.5159308917859,3.22742341791913,4.06279459783025,4.51781614902251,3.0019676506363,1.79778787556068,4.59125838556354,2.24650318953266,1.91801137739712,3.62836430205388,9.57425556583833,5.11469700639233,2.32167390902867,0,2.4912889959823,10.3011952755265,21.9022825736485,3.04064382587163,2.42159801053347,1.47311054395026,2.21523671208619,0.422510572623884,0.637812899895131,0.209658645508376,0.112328631146495,0.300353785683013,0.16072558669708,0.285012743741249,0.59675003159727,0.182664153764634,0,1.63841583378639,0.889509253863555,0.426730222566507,0,0.574752439954483,0,0,0.569212969109448,0,0.764546456250458,0,1.12101712596307,0,1.7703879310245,5.50215067848831,2.67281948699362,0.501559486172034,0.651844533267181,0,0,0.668462741311041,0,0.664601683750863,0,2.0494611156108,1.43065282315866,1.64437904603676,2.76350017785848,1.44901542867526,0.296573126324121,0.535081656179426,0,1.13309342697566,1.14966148080576,0.34362744548263,0.506039384039006,0.318565414324097,0,0.950452044448374,0.150575119077773,0,0,0.473554504088034,0,1.81446068902259,5.08136371988664,2.89648807765598,0,0,0,0,0,0.144846518960824,0,0,0.189069634328136,0.221729397462564,0.087834785693126,0.130979075497713,0,0,0.324547393654683,0.174129737299267,0.398873881556595,0.715471872916026,0,0,0.198762407366705,0,0,0.56530794192401,0,0,0,0,0.35576626268671,0,0,0,0,0,0,0.0892997282840798,0,0,0,0,0.183201743930407,0,0,0,1.98788780678127,0.506522046658319,0.397227542439656,0.286836620748814,0,0,0,0,0,0.269421344139376,0.326923806226917,0,0,0,0,0,0,0.117434498643765,0.161872944368132,0.140450806702248,0.204154171254893,0.368502951935304,0.309977343527296,0,0,0,0,1.34668891163253,0.125118519871964,0.554128230968366,0.438977620880838,0.30648779579902,0,0.113432183160021,1.07633781413317,0,0.635795703478686,0,0.412210116953756,0.772921620136887,0.18611685633159,1.5189869901714,0.292311015483596,0.504867548488229,0.0920498986422993,0.484938170456436,0.710019185033229,0.201504196455281,0,0,0.545492241181669,0,0,0,0.232387885739037,0.10366105501537,0,0.36497735907583,0,0,0,0,0,0.118306800039844,0.168584690078102,0.241011029883482,0.441175890929576,0.217879444092406,0.237270619111097,0.539325232640658,0,0,0,0,0,0,0,0,1.77236972004421,0,0.245976877086227,0,0.109750285408626,0,0.301586917234893,0.370353780634118,0.325808305310325,0,0,0,0,0,0,0.380508304469197,0,0,0.246217006087397,0,0,0,0.16798212819886,0,0.447792613514241,0.290633938513962,0,0,0,0.829312462163088,1.58531948758658,1.38866676769018,0,0,0,0,0,0,0,0,0,0,0.258543431515556,0,0,0,0,0,0,0,0,0,0,0,0,0,0.301439377059586,0,0.099972991182057,1.2162378064119,0.502257091432126,0,0,0,0,0.289562613335158,0.61642896765115,0,0.896681151948218,2.36436912242313,3.88129634747131,2.69520376187472,0,0,0,0.167516265334349,0,0,0,0,0,0,0,0.207970861530807,0.356857977594324,0.157702415033935,0.117141414992713,0,0,0,0,0,0.173767228936166,0,0,1.24060815673732,2.15714200818617,0.853820462427555,0.303127571446259,0,0,0.248107807818777,0.460385919864187,0.561320188866147,0.128139149255701,1.02341449813341,0.160853921143607,0,0,0,0.0821271560138091,0,0.464841513839837,0.120859449591622,0.802025881213139,1.01289087829486,0,0.728364672026868,0.131124414959424,0,0.0770153371044148,0,0,0.211103257785751,0,0,0.215915916102139,0,0,0,0.254876273045038,0,0,0,0,0,0,0,0.206082023295445,0.183138929636687,0,0,0,1.6068392984416,0.290012154876366,0.616194468458578,0.307007349452259,0,0.537101224341368,0.435050081742686,0.0852266274161009,0.0890320356467374,0.991709492165869,0.192190067365106,2.67986696238627,0.10115778085555,0,0.31481234683064,0.6970372701606,0,0,0,0,0.143124886741991,0,0,0,0,0,0,0,0.179872457583315,0,0.353437207037059,0,0,0,0,0.243713489631284,0,0.272999822815972,1.1312434556297,0,0,0,0,0,0,0,0.30982349809975,0,0.143411352204052,0.0982490410131212,0,0.354761064070598,0.422215270595328,0,0,0,0.192444225451024,0,0,0.753150406214233,0,0,0,0.459446800413919,0,0,0,0.238231775457789,0,0,0,0.79312517629427,0.106824071127473,0,0.490080431962063,0.185803175125719,0.28853842595289,0.355709216742071,0,0,0,0.423347165447766,0.324621940274555,0,0.228234679033192,0.156679895773023,0,0,0.481764225311099,0.403599414382095,0.425846237690326,0,0.307240764308458,0.223676107892416,0.333698283423817,0,0,0,0,0,0,0.18714054040822,0,0,0.780103689942349,0,0.23874448473769,0.296964680832639,0.307160702099232,0,0.422008249231538,0.667852230137435,0.1648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| |||
|short_description=p@chr3:156415226..156415230,+ | |||
}} |
Revision as of 22:13, 21 January 2014
Short description: | p@chr3:156415226..156415230, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr3:156415226..156415230, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 6.73e-40 | 42 |
CD14-positive, CD16-negative classical monocyte | 6.73e-40 | 42 |
defensive cell | 1.35e-35 | 48 |
phagocyte | 1.35e-35 | 48 |
macrophage dendritic cell progenitor | 1.43e-28 | 61 |
granulocyte monocyte progenitor cell | 2.89e-28 | 67 |
monopoietic cell | 3.00e-26 | 59 |
monocyte | 3.00e-26 | 59 |
monoblast | 3.00e-26 | 59 |
promonocyte | 3.00e-26 | 59 |
myeloid lineage restricted progenitor cell | 1.89e-25 | 66 |
hematopoietic lineage restricted progenitor cell | 5.88e-25 | 120 |
leukocyte | 1.21e-24 | 136 |
nongranular leukocyte | 3.78e-24 | 115 |
myeloid leukocyte | 6.24e-24 | 72 |
hematopoietic stem cell | 5.85e-17 | 168 |
hematopoietic oligopotent progenitor cell | 1.45e-16 | 161 |
hematopoietic multipotent progenitor cell | 1.45e-16 | 161 |
hematopoietic cell | 2.50e-15 | 177 |
myeloid cell | 3.32e-15 | 108 |
common myeloid progenitor | 3.32e-15 | 108 |
mesenchymal cell | 1.09e-08 | 354 |
connective tissue cell | 3.53e-08 | 361 |
motile cell | 1.17e-07 | 386 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 4.33e-25 | 76 |
bone element | 9.51e-24 | 82 |
skeletal element | 1.39e-20 | 90 |
hematopoietic system | 3.23e-20 | 98 |
blood island | 3.23e-20 | 98 |
immune system | 1.73e-19 | 93 |
skeletal system | 2.02e-18 | 100 |
hemolymphoid system | 3.17e-17 | 108 |
connective tissue | 5.85e-08 | 371 |
lateral plate mesoderm | 1.74e-07 | 203 |
musculoskeletal system | 3.10e-07 | 167 |
mucosa of oral region | 3.86e-07 | 4 |
respiratory system mucosa | 3.86e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
squamous cell carcinoma | 5.31e-08 | 14 |