FFCP PHASE1:Hg19::chr3:191047459..191047468,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=152137 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=18111 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=0bp_to_CU687992,HQ448050_5end | |||
|description=CAGE_peak_14_at_CCDC50_5end | |||
|id=chr3:191047459..191047468,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000784;6.43e-23;3!CL:0002593;1.38e-09;2!CL:0000451;6.16e-07;10!CL:0000307;8.38e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000784,5.15e-23,3;CL:0002593,1.86e-09,2;CL:0000451,5.81e-07,10;CL:0000068,9.64e-07,3;CL:0000069,9.64e-07,3;CL:0000307,9.64e-07,3;CL:0000377,9.64e-07,3 | |||
|ontology_enrichment_development_v019=CL:0000377;8.38e-07;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:3371;3.16e-18;1!DOID:4549;3.16e-18;1!DOID:5861;3.16e-18;1!DOID:6496;3.16e-18;1!DOID:154;1.38e-09;2!DOID:4236;1.38e-09;2 | |||
|ontology_enrichment_disease_v019_2=DOID:3371,3.16e-18,1;DOID:4549,3.16e-18,1;DOID:5861,3.16e-18,1;DOID:6496,3.16e-18,1;DOID:154,1.22e-09,2;DOID:4236,1.22e-09,2 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0002426;8.01e-18;1!UBERON:0003831;8.01e-18;1!UBERON:0003898;8.01e-18;1!UBERON:0004830;8.01e-18;1!UBERON:0003830;8.01e-18;1!UBERON:0005175;8.01e-18;1!UBERON:0001774;8.01e-18;1!UBERON:0001103;8.01e-18;1!UBERON:0005090;1.38e-09;2!UBERON:0001630;1.38e-09;2!UBERON:0002456;1.38e-09;2!UBERON:0002369;5.80e-07;3!UBERON:0001235;5.80e-07;3!UBERON:0006858;5.80e-07;3!UBERON:0002418;6.14e-07;3!UBERON:0004755;6.14e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002426,3.75e-18,1;UBERON:0003831,3.75e-18,1;UBERON:0003898,3.75e-18,1;UBERON:0004830,3.75e-18,1;UBERON:0003830,3.75e-18,1;UBERON:0005175,3.75e-18,1;UBERON:0001774,3.75e-18,1;UBERON:0001103,3.75e-18,1;UBERON:0010084,3.75e-18,1;UBERON:0005090,9.46e-10,2;UBERON:0001630,9.46e-10,2;UBERON:0002456,1.86e-09,2;UBERON:0002369,5.80e-07,3;UBERON:0001235,5.80e-07,3;UBERON:0006858,5.80e-07,3;UBERON:0002418,6.14e-07,3;UBERON:0004755,6.14e-07,3 | |||
|phase1_expression=0,0.214100523890983,0.140954404095971,0,0.446961094427288,0,0,0,0,0,0,0,0,0,0,0,0,0,0.487932798790507,0,0.204000691244253,0.313454721478088,0,0.136874425072884,0,0.229240217243854,0,0.157421562627358,0,0,0,0,0,0,0,0,0,0,0.200544447470142,0,0,0,0,0,0,0,0,0,0,0,0.256160706529101,0.236482229888585,0,0,0,0.188242339542605,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.209658645508376,0.112328631146495,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.32592226663359,0,0,0,0,0,0,0,0,0,0.276350017785848,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12786256184353,0,0,0,0,0,0,0.221729397462564,0,0,0,0.370784442784429,0,0.174129737299267,0,1.43094374583205,0,1.11437250398869,0.198762407366705,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.22452937262617,0.112611480483322,0,0,0.366403487860815,0,0,0,0,0.379891534993739,0,0,0,0,0,0,0,0.134710672069688,0.163461903113459,0,0,0.234321431833797,0,0,0.149448680551801,0.23486899728753,0,0,0,0.245668634623536,0,0,0,0,0,0,0.250237039743928,0,0,0,0,0,0,0.213557388818567,0.211931901159562,0,0.103052529238439,0,0,0.168776332241266,0,0,0.0920498986422993,0.161646056818812,0,0.10075209822764,0,0,0.272746120590835,0,0,0,0.116193942869518,0.10366105501537,0,0,0,0.643240938192885,0,0,0,0,0,0,0,0,0.237270619111097,0,0,0,0,0,0,0,1.26755034821831,0.982827216677626,0.590789906681404,0,0,0.171567810298526,0.109750285408626,0,0,0,0,0,0,0.115930404975077,0,0,0,0.190254152234598,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.381988425558278,0,0,0.308482478109971,0,0.285826432630578,0.112131084345361,0.43596006883328,0,0.129271715757778,0,0,0.26593811658487,0,0,0,0,0.428933980974443,0,0,0,0,0,0,0,0,0,0,0,0.239624855491583,0,0,0.144781306667579,0.205476322550383,0,0,0,0.215627574859517,0,0,0,0,0,1.27587750330633,0,0,0,0,0,0,0.415941723061614,0,0.157702415033935,0,0,0,1.03473071292505,0,0.553107505625109,0.173767228936166,0,0,0,0,0,0,0,0,0,0,0.280660094433074,0.128139149255701,0,0,0,0.154209693802656,0,0,0.519254429183621,0,0.120859449591622,0.200506470303285,0.0920809889358963,0.114814448164607,0.182091168006717,0.131124414959424,0,0,0,0,0.105551628892876,0,0.510281115829547,0.215915916102139,0,0,0.501689773854853,0,0.831076008928724,0,0,0,0.256450125116389,0,0,0,0.27470839445503,0,0,0,0,0,0,0,0.137836572484531,0.107420244868274,0.145016693914229,0,0,0.165284915360978,0,0,0,0,0,0.6970372701606,0,0,0,0,0.286249773483982,0,0,0,0,0,0,0,0.179872457583315,0,0,0,0,0,0,0,1.05650146756755,0,0,0,0,0,0.876901770507525,0,0,0,0,0.281695602532241,0.143411352204052,0,0,0,0,0,0,0,0.0962221127255121,0,1.08890984861323,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245040215981032,0.371606350251437,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.4612234787281,0.222886768554957,0,0,0,0,0,0,0,0,0,0,0.276283915531148,0,0,0.123084805461069,0,0,0,0,0,0,0,0,0.0927680981618513,0,0.260427761085233,0,0.724999575434793,0.1137934482855,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113942055847001,0,0,0,0.638002319463839,0,0,0,0,0,0,0.19606253431774,0,0,0,0.210998064528027,0.163232808159148,0,0.216388639742091,0,0,0,0.296521128680622,0,0,0,1.60515529459758,0.234264445725339,0.182454789215666,0,0,0,0,0.30607276163049,0.063186579628488,0.150323419414493,0,0,0,0.313932918407225,0,0,0.277349346026277,0,0,0,0.34945333648406,0.171986032471617,0,0.146178634172371,0.0821154570532092,0,3.00070830751101,0,0,0.19871461170299,0,0,0.0801588202515337,0.213452994739353,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.525774708558629,0.279282401272254,0.458320848023367,0,0,0.429226048136571,0.446342914883745,0.0671834724867263,0,0,0.0787831823072236,0,0.0674035438541849,0.0984274815147488,0,0,0,0,0.275078873194468,0,0,0,0.0607495566580247,0,0,0,0,0,0,0,0,0,0,0,0.326587360109409,0,0,0.170388021785422,0,0,0,0.129282956361551,0.13223260174269,0,0,0,0,0.414239055347196,0,0,0,0,0,0,0.306345576763462,0,0,0,0,0,0.573409195690071,0.221858103073705,0.0620964029413835,0.138348634936231,0,0,0.285465333544967,0,0.468334905806882,0.144921028610825,0,0.233713309847224,0,0,0,0,0.228840068396924,0,0.15543720058278,0.147855149989634,0.159296767163702,0,0,0,0.265841714557995,0,0,0,0.406870733204662,0,0.107410557042488,0,0,0,0,0,0,0,0,0.260994291965212,0,0,0.244736704506468,0.179088841081487,0.308801447160972,0,0,0,0,0,0,0,0,0.389720617678777,0,0.163565394255844,1.31043939538565,0,0,0,0,0.172214979660816,0,0,0.139879507719444,0,0,0,0.314531883711793,0,0,0.425149840203366,0.123935764259002,0,0,0,0,0,0.3062454773532,0,1.41696576325585,0,0,0,0,0.161475645631851,0,0,0,0.183428598521679,0,0,0.690359926060101,0,0.0752103283492573,0,0,0,0.163771917510097,0,0.135075169236789,0,0,0,0,0,0,0,0,0,0,0,0,0,0.115233987555779,0,0.0679697329768317,0,0,0.222462803784138,0,0,0,0,0,0.9555033757741,0.0714765441766563,0,0.116241425368125,0,0,0.207216164163037,0,0,0,0.118332000730565,0,0,0,0.31020638566432,0.955538938977433,0,0,0.121917924982269,0,0,0,0,0,0,0.237840181555137,0.11294608203896,0.329821550236287,0,0.0771741581079447,0,0.470317296361523,0,0,0,0,0.4226557275834,0.169927114687817,0.187967835959707,0.06445788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| |||
|short_description=p14@CCDC50 | |||
}} |
Revision as of 23:19, 21 January 2014
Short description: | p14@CCDC50 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_14_at_CCDC50_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_CU687992, HQ448050_5end |
EntrezGene: | CCDC50 |
HGNC: | 18111 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
plasmacytoid dendritic cell | 5.15e-23 | 3 |
smooth muscle cell of the internal thoracic artery | 1.86e-09 | 2 |
dendritic cell | 5.81e-07 | 10 |
duct epithelial cell | 9.64e-07 | 3 |
branched duct epithelial cell | 9.64e-07 | 3 |
tracheal epithelial cell | 9.64e-07 | 3 |
tracheoblast | 9.64e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
chest muscle | 3.75e-18 | 1 |
respiratory system muscle | 3.75e-18 | 1 |
skeletal muscle of trunk | 3.75e-18 | 1 |
respiratory system skeletal muscle | 3.75e-18 | 1 |
thoracic segment muscle | 3.75e-18 | 1 |
chest organ | 3.75e-18 | 1 |
muscle of trunk | 3.75e-18 | 1 |
diaphragm | 3.75e-18 | 1 |
future diaphragm | 3.75e-18 | 1 |
muscle structure | 9.46e-10 | 2 |
muscle organ | 9.46e-10 | 2 |
internal thoracic artery | 1.86e-09 | 2 |
adrenal gland | 5.80e-07 | 3 |
adrenal cortex | 5.80e-07 | 3 |
adrenal/interrenal gland | 5.80e-07 | 3 |
cartilage tissue | 6.14e-07 | 3 |
skeletal tissue | 6.14e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
chondrosarcoma | 3.16e-18 | 1 |
extraosseous chondrosarcoma | 3.16e-18 | 1 |
myxoid chondrosarcoma | 3.16e-18 | 1 |
extraskeletal myxoid chondrosarcoma | 3.16e-18 | 1 |
mixed cell type cancer | 1.22e-09 | 2 |
carcinosarcoma | 1.22e-09 | 2 |