FFCP PHASE1:Mm9::chr13:33096432..33096447,+: Difference between revisions
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{{FFCP|EntrezGene=20723|HGNC=|MCL_coexpression_id=2066|UniProt=O08797|association_with_transcript=22bp_to_ENSMUST00000006391,NM_009256,uc007pzz.1_5end|description=CAGE_peak_3_at_Serpinb9_5end|id=chr13:33096432..33096447,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000926!1.19e-15!193;UBERON:0004120!1.19e-15!193;UBERON:0006603!1.19e-15!193;UBERON:0003104!1.28e-11!131;UBERON:0009142!1.28e-11!131;UBERON:0000464!3.28e-11!57;UBERON:0009569!7.43e-11!66;UBERON:0005178!7.70e-11!17;UBERON:0005181!7.70e-11!17;UBERON:0002224!7.70e-11!17;UBERON:0000915!7.70e-11!17;UBERON:0008947!7.70e-11!17;UBERON:0003258!7.70e-11!17;UBERON:0000077!1.63e-10!97;UBERON:0001004!5.06e-10!42;UBERON:0000466!5.07e-10!79;UBERON:0004872!7.60e-10!33;UBERON:0000065!1.73e-09!41;UBERON:0002048!2.48e-09!14;UBERON:0000117!2.48e-09!14;UBERON:0000171!2.48e-09!14;UBERON:0000170!2.48e-09!14;UBERON:0005597!2.48e-09!14;UBERON:0000118!2.48e-09!14;UBERON:0001041!4.45e-09!92;UBERON:0001048!9.03e-09!147;UBERON:0005177!1.15e-08!85;UBERON:0002100!1.83e-08!98;UBERON:0005153!2.18e-08!17;UBERON:0000477!3.08e-08!154;UBERON:0004119!7.03e-08!130;UBERON:0000925!7.03e-08!130;UBERON:0006595!7.03e-08!130;UBERON:0001007!3.90e-07!128;UBERON:0001555!3.90e-07!128;UBERON:0007026!3.90e-07!128;UBERON:0004535!6.17e-07!23;UBERON:0001009!6.17e-07!23;UBERON:0000062!6.20e-07!269;UBERON:0005157!7.51e-07!27|ontology_enrichment_uberon_v019_2=UBERON:0005178,2.03e-11,17;UBERON:0005181,2.03e-11,17;UBERON:0002224,2.03e-11,17;UBERON:0000915,2.03e-11,17;UBERON:0008947,2.03e-11,17;UBERON:0003258,2.03e-11,17;UBERON:0009569,6.71e-11,66;UBERON:0001004,1.57e-10,42;UBERON:0004872,3.64e-10,33;UBERON:0002100,4.71e-10,90;UBERON:0000065,5.78e-10,41;UBERON:0001041,7.76e-10,80;UBERON:0002048,8.11e-10,14;UBERON:0000117,8.11e-10,14;UBERON:0000171,8.11e-10,14;UBERON:0000170,8.11e-10,14;UBERON:0005597,8.11e-10,14;UBERON:0000118,8.11e-10,14;UBERON:0005177,1.21e-09,79;UBERON:0005153,3.83e-09,17;UBERON:0001048,1.50e-08,134;UBERON:0004119,6.86e-08,118;UBERON:0000925,6.86e-08,118;UBERON:0006595,6.86e-08,118;UBERON:0001007,4.12e-07,116;UBERON:0001555,4.12e-07,116;UBERON:0007026,4.12e-07,116;UBERON:0004535,4.39e-07,23;UBERON:0001009,4.39e-07,23;UBERON:0005157,7.90e-07,20;UBERON:0000926,9.08e-07,120;UBERON:0004120,9.08e-07,120;UBERON:0006603,9.08e-07,120|phase1_expression=1.44133962394315,1.39590163055744,1.36499771816861,0.30246421130683,0,0.839396359559449,1.40167584357315,5.81054955487093,0.703943610758334,0.70219357896598,1.71217968225505,1.7549874978974,3.93761678841773,4.37102012094987,0.999329285446988,1.82227740650843,0.699561878128147,1.41957974411207,1.7824876368746,0.84877930359606,2.97651515528744,0.893618560807968,1.30599894569468,2.07990149631429,4.12936705920906,1.72269589234506,0.86152399231815,2.15471232685889,0.570070258369122,1.26015064879965,1.33038306393183,0,0,0,0.866554859253824,0.831173226792462,0.204169356262369,0,0,0,0.588231488031014,0,0,5.16176953699867,4.76471576731718,3.48738829107195,1.56478268869608,0,1.5378032791413,2.13872888981712,1.95980990275508,1.43752564364972,0.167782606057736,3.62681071005672,2.01656279485478,2.82985379639542,1.43266719969378,2.06268836910977,0,0,0,1.0165335962074,0,0,0,0,0.299600110518405,0,0,0.135005938331691,0,0.856952953211411,0.220868540951614,0.122490799214954,0.0958454710182364,0,1.10115880999389,1.91531007127782,1.38245879930619,0,0,0,1.3959149950069,2.25105044012672,1.5279824777681,1.17851434189467,0.996601765593721,0,0.227178579999552,0.68014404096107,4.63783181922684,5.16254326188832,2.719885334831,1.61910957491345,1.94932925234301,0.896053774194671,1.26399978118577,2.55645483867087,1.81850203222008,1.06001872353102,0.563373679106722,1.28326477414318,2.54805239706646,0,5.62876706629157,5.06719730950197,3.0331466700887,1.94112595522402,7.76813650941515,9.20341262201914,1.04091196059682,0.913396434936424,1.61430848079241,2.26083960828934,1.76383060703557,4.27266410520897,2.96633961281249,4.77177877835708,1.76922110389975,0.647067399789637,1.32504911076236,0.484875253135222,1.86391761218122,0.878342391034642,1.25668024088073,1.27728527604296,0.11981512450592,0,0.254140454146129,2.99581278809645,1.83000241127451,0.376963056338593,1.73824320192276,1.53429274398198,2.49345653471472,1.94689515681309,1.62942982160506,1.99051152976149,3.0326731012041,1.05220927943237,0.520481771850815,0.919608417733892,0.720248519221397,0.30140963567143,0.340182495756639,0.384341160854549,0.468508622798644,1.29351685369508,0.215567992932842,0.189106080167819,0.175951124163949,0.876782929710299,1.94633074457919,0.696504333044333,1.23469281844766,1.39323986772945,1.40442637462647,0,0,0.828503090142008,1.17263029990548,2.88099298337624,3.78791576936336,1.96764231747404,2.1597395804233,1.86027155800326,2.41446061259657,2.45207218971056,3.62031669809657,2.29834449710733,3.16168357228837,3.50879969820798,4.17145219052996,4.02619256281115,1.47202963994889,0.6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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:20723 | |||
|HGNC= | |||
|MCL_coexpression_id=2066 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:O08797 | |||
|association_with_transcript=22bp_to_ENSMUST00000006391,NM_009256,uc007pzz.1_5end | |||
|cluster_id=chr13:33096432..33096447,+ | |||
|description=CAGE_peak_3_at_Serpinb9_5end | |||
|id=chr13:33096432..33096447,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000926!1.19e-15!193;UBERON:0004120!1.19e-15!193;UBERON:0006603!1.19e-15!193;UBERON:0003104!1.28e-11!131;UBERON:0009142!1.28e-11!131;UBERON:0000464!3.28e-11!57;UBERON:0009569!7.43e-11!66;UBERON:0005178!7.70e-11!17;UBERON:0005181!7.70e-11!17;UBERON:0002224!7.70e-11!17;UBERON:0000915!7.70e-11!17;UBERON:0008947!7.70e-11!17;UBERON:0003258!7.70e-11!17;UBERON:0000077!1.63e-10!97;UBERON:0001004!5.06e-10!42;UBERON:0000466!5.07e-10!79;UBERON:0004872!7.60e-10!33;UBERON:0000065!1.73e-09!41;UBERON:0002048!2.48e-09!14;UBERON:0000117!2.48e-09!14;UBERON:0000171!2.48e-09!14;UBERON:0000170!2.48e-09!14;UBERON:0005597!2.48e-09!14;UBERON:0000118!2.48e-09!14;UBERON:0001041!4.45e-09!92;UBERON:0001048!9.03e-09!147;UBERON:0005177!1.15e-08!85;UBERON:0002100!1.83e-08!98;UBERON:0005153!2.18e-08!17;UBERON:0000477!3.08e-08!154;UBERON:0004119!7.03e-08!130;UBERON:0000925!7.03e-08!130;UBERON:0006595!7.03e-08!130;UBERON:0001007!3.90e-07!128;UBERON:0001555!3.90e-07!128;UBERON:0007026!3.90e-07!128;UBERON:0004535!6.17e-07!23;UBERON:0001009!6.17e-07!23;UBERON:0000062!6.20e-07!269;UBERON:0005157!7.51e-07!27 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005178,2.03e-11,17;UBERON:0005181,2.03e-11,17;UBERON:0002224,2.03e-11,17;UBERON:0000915,2.03e-11,17;UBERON:0008947,2.03e-11,17;UBERON:0003258,2.03e-11,17;UBERON:0009569,6.71e-11,66;UBERON:0001004,1.57e-10,42;UBERON:0004872,3.64e-10,33;UBERON:0002100,4.71e-10,90;UBERON:0000065,5.78e-10,41;UBERON:0001041,7.76e-10,80;UBERON:0002048,8.11e-10,14;UBERON:0000117,8.11e-10,14;UBERON:0000171,8.11e-10,14;UBERON:0000170,8.11e-10,14;UBERON:0005597,8.11e-10,14;UBERON:0000118,8.11e-10,14;UBERON:0005177,1.21e-09,79;UBERON:0005153,3.83e-09,17;UBERON:0001048,1.50e-08,134;UBERON:0004119,6.86e-08,118;UBERON:0000925,6.86e-08,118;UBERON:0006595,6.86e-08,118;UBERON:0001007,4.12e-07,116;UBERON:0001555,4.12e-07,116;UBERON:0007026,4.12e-07,116;UBERON:0004535,4.39e-07,23;UBERON:0001009,4.39e-07,23;UBERON:0005157,7.90e-07,20;UBERON:0000926,9.08e-07,120;UBERON:0004120,9.08e-07,120;UBERON:0006603,9.08e-07,120 | |||
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| |||
|short_description=p3@Serpinb9 | |||
}} |
Revision as of 21:53, 5 August 2015
Short description: | p3@Serpinb9 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Serpinb9_5end |
Coexpression cluster: | MCL_coexpression_mm9:2066 |
Association with transcript: | 22bp_to_ENSMUST00000006391, NM_009256, uc007pzz.1_5end |
EntrezGene: | 20723 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
thoracic cavity element | 2.03e-11 | 17 |
thoracic segment organ | 2.03e-11 | 17 |
thoracic cavity | 2.03e-11 | 17 |
thoracic segment of trunk | 2.03e-11 | 17 |
respiratory primordium | 2.03e-11 | 17 |
endoderm of foregut | 2.03e-11 | 17 |
subdivision of trunk | 6.71e-11 | 66 |
respiratory system | 1.57e-10 | 42 |
splanchnic layer of lateral plate mesoderm | 3.64e-10 | 33 |
trunk | 4.71e-10 | 90 |
respiratory tract | 5.78e-10 | 41 |
foregut | 7.76e-10 | 80 |
lung | 8.11e-10 | 14 |
respiratory tube | 8.11e-10 | 14 |
respiration organ | 8.11e-10 | 14 |
pair of lungs | 8.11e-10 | 14 |
lung primordium | 8.11e-10 | 14 |
lung bud | 8.11e-10 | 14 |
trunk region element | 1.21e-09 | 79 |
epithelial bud | 3.83e-09 | 17 |
primordium | 1.50e-08 | 134 |
endoderm-derived structure | 6.86e-08 | 118 |
endoderm | 6.86e-08 | 118 |
presumptive endoderm | 6.86e-08 | 118 |
digestive system | 4.12e-07 | 116 |
digestive tract | 4.12e-07 | 116 |
primitive gut | 4.12e-07 | 116 |
cardiovascular system | 4.39e-07 | 23 |
circulatory system | 4.39e-07 | 23 |
epithelial fold | 7.90e-07 | 20 |
mesoderm | 9.08e-07 | 120 |
mesoderm-derived structure | 9.08e-07 | 120 |
presumptive mesoderm | 9.08e-07 | 120 |