FFCP PHASE1:Hg19::chr4:11370223..11370243,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport= | |||
|DPIdataset=robust | |||
|EntrezGene=693157 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=32828 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=-207bp_to_NR_030298_5end | |||
|coexpression_cluster_id=C248 | |||
|description=CAGE_peak_1_at_MIR572_5end | |||
|id=chr4:11370223..11370243,+ | |||
|ontology_enrichment_celltype=CL:0002057!1.63e-15!42;CL:0000860!1.61e-14!45;CL:0000988!1.77e-13!182;CL:0000738!1.14e-12!140;CL:0002031!2.53e-12!124;CL:0000037!2.98e-12!172;CL:0000566!2.98e-12!172;CL:0002032!1.12e-11!165;CL:0000837!1.12e-11!165;CL:0000557!5.65e-10!71;CL:0000839!7.99e-10!70;CL:0002087!1.32e-09!119;CL:0000763!3.06e-09!112;CL:0000049!3.06e-09!112;CL:0002009!7.52e-09!65;CL:0000766!1.22e-08!76;CL:0002194!4.72e-08!63;CL:0000576!4.72e-08!63;CL:0000040!4.72e-08!63;CL:0000559!4.72e-08!63;CL:0000003!1.48e-07!722 | |||
|ontology_enrichment_celltype_v019=CL:0000860;2.60e-19;33!CL:0002057;2.60e-19;33!CL:0000473;4.37e-15;39!CL:0000234;4.37e-15;39!CL:0000576;2.24e-11;48!CL:0000766;8.86e-09;69 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,3.08e-22,42;CL:0002057,3.08e-22,42;CL:0000473,3.20e-21,48;CL:0000234,3.20e-21,48;CL:0000557,3.30e-17,67;CL:0000839,5.45e-17,66;CL:0000763,1.13e-16,108;CL:0000049,1.13e-16,108;CL:0000766,3.67e-16,72;CL:0000738,5.76e-16,136;CL:0000988,6.27e-16,177;CL:0002032,8.28e-16,161;CL:0000837,8.28e-16,161;CL:0000037,8.88e-16,168;CL:0002031,1.07e-15,120;CL:0002009,4.72e-15,61;CL:0002194,8.81e-14,59;CL:0000576,8.81e-14,59;CL:0000040,8.81e-14,59;CL:0000559,8.81e-14,59;CL:0002087,6.85e-11,115 | |||
|ontology_enrichment_development_v019=CL:0002057;3.18e-16;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!9.42e-11!80;UBERON:0001474!3.70e-09!86;UBERON:0002390!8.30e-08!102;UBERON:0003061!8.30e-08!102;UBERON:0002193!1.39e-07!112;UBERON:0002405!2.69e-07!115;UBERON:0004765!3.03e-07!101;UBERON:0001434!3.03e-07!101;UBERON:0001737!8.80e-07!9 | |||
|ontology_enrichment_uberon_v019=UBERON:0001737;4.70e-09;9!UBERON:0001557;4.70e-09;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,1.65e-17,76;UBERON:0001474,1.66e-15,82;UBERON:0004765,6.65e-15,90;UBERON:0002405,1.58e-14,93;UBERON:0002390,3.77e-12,98;UBERON:0003061,3.77e-12,98;UBERON:0002193,9.65e-12,108;UBERON:0001434,1.55e-11,100;UBERON:0001737,5.27e-09,9 | |||
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| |||
|short_description=p1@MIR572 | |||
}} |
Revision as of 00:13, 22 January 2014
Short description: | p1@MIR572 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_MIR572_5end |
Coexpression cluster: | C248_iPS_Aortic_Hep2_amygdala_acute_medial_Myoblast |
Association with transcript: | -207bp_to_NR_030298_5end |
EntrezGene: | MIR572 |
HGNC: | 32828 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 3.08e-22 | 42 |
CD14-positive, CD16-negative classical monocyte | 3.08e-22 | 42 |
defensive cell | 3.20e-21 | 48 |
phagocyte | 3.20e-21 | 48 |
granulocyte monocyte progenitor cell | 3.30e-17 | 67 |
myeloid lineage restricted progenitor cell | 5.45e-17 | 66 |
myeloid cell | 1.13e-16 | 108 |
common myeloid progenitor | 1.13e-16 | 108 |
myeloid leukocyte | 3.67e-16 | 72 |
leukocyte | 5.76e-16 | 136 |
hematopoietic cell | 6.27e-16 | 177 |
hematopoietic oligopotent progenitor cell | 8.28e-16 | 161 |
hematopoietic multipotent progenitor cell | 8.28e-16 | 161 |
hematopoietic stem cell | 8.88e-16 | 168 |
hematopoietic lineage restricted progenitor cell | 1.07e-15 | 120 |
macrophage dendritic cell progenitor | 4.72e-15 | 61 |
monopoietic cell | 8.81e-14 | 59 |
monocyte | 8.81e-14 | 59 |
monoblast | 8.81e-14 | 59 |
promonocyte | 8.81e-14 | 59 |
nongranular leukocyte | 6.85e-11 | 115 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 1.65e-17 | 76 |
bone element | 1.66e-15 | 82 |
skeletal element | 6.65e-15 | 90 |
immune system | 1.58e-14 | 93 |
hematopoietic system | 3.77e-12 | 98 |
blood island | 3.77e-12 | 98 |
hemolymphoid system | 9.65e-12 | 108 |
skeletal system | 1.55e-11 | 100 |
larynx | 5.27e-09 | 9 |