FFCP PHASE1:Hg19::chr4:26076498..26076513,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=not | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C82 | |||
|description=CAGE_peak_at_chr4:26076498..26076513,+ | |||
|id=chr4:26076498..26076513,+ | |||
|ontology_enrichment_celltype=CL:0002057!1.24e-66!42;CL:0000860!1.18e-61!45;CL:0000766!2.00e-56!76;CL:0000738!4.49e-55!140;CL:0002009!1.15e-48!65;CL:0000557!6.86e-44!71;CL:0002194!7.41e-44!63;CL:0000576!7.41e-44!63;CL:0000040!7.41e-44!63;CL:0000559!7.41e-44!63;CL:0000037!9.54e-43!172;CL:0000566!9.54e-43!172;CL:0002087!3.78e-42!119;CL:0000763!6.40e-40!112;CL:0000049!6.40e-40!112;CL:0000988!8.90e-40!182;CL:0002032!6.80e-39!165;CL:0000837!6.80e-39!165;CL:0000839!9.97e-39!70;CL:0002031!7.32e-38!124;CL:0002393!6.29e-30!9;CL:0002397!6.29e-30!9;CL:0000094!3.63e-22!8;CL:0000081!8.27e-16!11;CL:0000134!1.47e-14!358;CL:0002320!4.66e-14!365;CL:0000219!2.73e-12!390;CL:0000767!4.44e-12!3;CL:0000842!3.33e-11!3;CL:0000034!5.55e-11!444;CL:0000048!6.08e-11!430;CL:0000723!1.25e-10!436;CL:0000875!1.34e-10!3;CL:0002396!1.34e-10!3;CL:0000771!1.59e-08!2;CL:0000224!1.67e-08!4;CL:0001014!4.16e-08!2;CL:0001016!4.16e-08!2 | |||
|ontology_enrichment_celltype_v019=CL:0000094;8.60e-56;8!CL:0000081;1.48e-40;11!CL:0000767;3.47e-38;3!CL:0000771;6.75e-26;2!CL:0002393;4.79e-19;6!CL:0002397;4.79e-19;6!CL:0000576;3.05e-15;48!CL:0000766;4.45e-15;69!CL:0000860;2.34e-09;33!CL:0002057;2.34e-09;33!CL:0000763;2.35e-08;100 | |||
|ontology_enrichment_celltype_v019_2=CL:0000094,7.85e-56,8;CL:0000081,1.38e-40,11;CL:0000767,2.70e-38,3;CL:0000766,1.41e-36,72;CL:0000771,7.67e-26,2;CL:0000763,5.66e-24,108;CL:0000049,5.66e-24,108;CL:0000860,6.98e-23,42;CL:0002057,6.98e-23,42;CL:0002393,4.66e-22,9;CL:0002397,4.66e-22,9;CL:0000738,1.69e-21,136;CL:0000473,6.59e-20,48;CL:0000234,6.59e-20,48;CL:0000037,4.19e-17,168;CL:0000988,3.76e-16,177;CL:0002194,9.80e-16,59;CL:0000576,9.80e-16,59;CL:0000040,9.80e-16,59;CL:0000559,9.80e-16,59;CL:0002032,1.41e-15,161;CL:0000837,1.41e-15,161;CL:0002009,3.39e-15,61;CL:0000839,5.47e-14,66;CL:0000557,9.08e-14,67;CL:0002087,1.78e-09,115;CL:0002031,2.80e-07,120;CL:0000134,3.77e-07,354;CL:0002320,5.67e-07,361 | |||
|ontology_enrichment_development_v019=CL:0002057;1.50e-17;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!1.86e-41!102;UBERON:0003061!1.86e-41!102;UBERON:0002371!4.68e-38!80;UBERON:0002193!6.39e-37!112;UBERON:0001474!7.71e-35!86;UBERON:0004765!1.84e-28!101;UBERON:0001434!1.84e-28!101;UBERON:0002405!5.27e-24!115;UBERON:0003081!1.27e-14!216;UBERON:0002204!5.10e-14!167;UBERON:0002384!2.25e-13!375;UBERON:0000178!1.11e-07!15;UBERON:0000179!1.11e-07!15;UBERON:0000463!1.11e-07!15 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,4.84e-12,76;UBERON:0002390,2.59e-11,98;UBERON:0003061,2.59e-11,98;UBERON:0001474,4.26e-11,82;UBERON:0002193,3.66e-10,108;UBERON:0004765,4.97e-10,90;UBERON:0002405,1.12e-09,93;UBERON:0001434,6.21e-09,100;UBERON:0002384,9.92e-07,371 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.93364276848904,1.53531759238885,4.64448369948228,0,0,0,0,0,0,1.66198622559563,0.200544447470142,0.868043482863407,0,0,0,0.290796477559129,0.377875943688809,0,0,0,0.309706370895104,1.43846196161075,1.2808035326455,6.3850202069918,0,0,0,0,0,0.449446968890169,0.306083892370903,0,0.639337125799041,0.329851300186716,0.398927315243264,0.852449501065388,0,0,0.622822248995575,1.7587406567972,0.521482918420201,6.5156653411535,0,0.368277635987565,0.316462387440884,1.05627643155971,0.850417199860174,1.67726916406701,0.336985893439485,0.300353785683013,0.32145117339416,0.285012743741249,0.19891667719909,1.0959849225878,0,0,0,0,0,0,0,0,0,0,0.382273228125229,0,0,0.526768169550154,0.196709770113833,0,0.205601498999509,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150575119077773,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.31780417436063,3.87780264148325,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.148631162288728,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.197030760201927,0.215627574859517,0,0,0,0.773288812777695,0,0,0.749007023947182,0,2.48649308061621,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.413536052245775,1.2942852049117,0.426910231213777,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.764637207142375,0,0.238231775457789,0.411362273086194,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.246169610922139,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0969890164884194,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.262887354279314,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.674921674654501,0.77380195455795,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.39997479170986,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.280272163313789,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr4:26076498..26076513,+ | |||
}} |
Revision as of 00:33, 22 January 2014
Short description: | p@chr4:26076498..26076513, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr4:26076498..26076513, + |
Coexpression cluster: | C82_Basophils_CD14_Eosinophils_Natural_Peripheral_immature_CD34 |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
granulocyte | 7.85e-56 | 8 |
blood cell | 1.38e-40 | 11 |
basophil | 2.70e-38 | 3 |
myeloid leukocyte | 1.41e-36 | 72 |
eosinophil | 7.67e-26 | 2 |
myeloid cell | 5.66e-24 | 108 |
common myeloid progenitor | 5.66e-24 | 108 |
classical monocyte | 6.98e-23 | 42 |
CD14-positive, CD16-negative classical monocyte | 6.98e-23 | 42 |
intermediate monocyte | 4.66e-22 | 9 |
CD14-positive, CD16-positive monocyte | 4.66e-22 | 9 |
leukocyte | 1.69e-21 | 136 |
defensive cell | 6.59e-20 | 48 |
phagocyte | 6.59e-20 | 48 |
hematopoietic stem cell | 4.19e-17 | 168 |
hematopoietic cell | 3.76e-16 | 177 |
monopoietic cell | 9.80e-16 | 59 |
monocyte | 9.80e-16 | 59 |
monoblast | 9.80e-16 | 59 |
promonocyte | 9.80e-16 | 59 |
hematopoietic oligopotent progenitor cell | 1.41e-15 | 161 |
hematopoietic multipotent progenitor cell | 1.41e-15 | 161 |
macrophage dendritic cell progenitor | 3.39e-15 | 61 |
myeloid lineage restricted progenitor cell | 5.47e-14 | 66 |
granulocyte monocyte progenitor cell | 9.08e-14 | 67 |
nongranular leukocyte | 1.78e-09 | 115 |
hematopoietic lineage restricted progenitor cell | 2.80e-07 | 120 |
mesenchymal cell | 3.77e-07 | 354 |
connective tissue cell | 5.67e-07 | 361 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 4.84e-12 | 76 |
hematopoietic system | 2.59e-11 | 98 |
blood island | 2.59e-11 | 98 |
bone element | 4.26e-11 | 82 |
hemolymphoid system | 3.66e-10 | 108 |
skeletal element | 4.97e-10 | 90 |
immune system | 1.12e-09 | 93 |
skeletal system | 6.21e-09 | 100 |
connective tissue | 9.92e-07 | 371 |