FFCP PHASE1:Mm9::chr15:79723547..79723567,-: Difference between revisions
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{{FFCP|EntrezGene=109361|HGNC=|UniProt=|association_with_transcript=0bp_to_NR_030675,uc007wuq.2_5end|description=CAGE_peak_1_at_D730005E14Rik_5end|id=chr15:79723547..79723567,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0000553,1.39e-09,6;CL:0000556,1.39e-09,6|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0003104!1.35e-10!131;UBERON:0009142!1.35e-10!131;UBERON:0000077!1.21e-08!97;UBERON:0004921!1.25e-08!126;UBERON:0004185!1.25e-08!126;UBERON:0001007!4.44e-08!128;UBERON:0001555!4.44e-08!128;UBERON:0007026!4.44e-08!128;UBERON:0001041!4.69e-08!92;UBERON:0000926!7.70e-08!193;UBERON:0004120!7.70e-08!193;UBERON:0006603!7.70e-08!193;UBERON:0004119!1.48e-07!130;UBERON:0000925!1.48e-07!130;UBERON:0006595!1.48e-07!130|ontology_enrichment_uberon_v019_2=UBERON:0002193,7.48e-12,48;UBERON:0002405,7.48e-12,48;UBERON:0002390,1.05e-11,45;UBERON:0003061,1.05e-11,45;UBERON:0000077,1.20e-11,35;UBERON:0004177,2.14e-09,29;UBERON:0005057,2.14e-09,29;UBERON:0004921,1.11e-08,114;UBERON:0003887,1.51e-08,10;UBERON:0001007,2.39e-08,116;UBERON:0001555,2.39e-08,116;UBERON:0007026,2.39e-08,116;UBERON:0003081,2.39e-08,87;UBERON:0001041,4.37e-08,80;UBERON:0004119,4.97e-08,118;UBERON:0000925,4.97e-08,118;UBERON:0006595,4.97e-08,118;UBERON:0000072,1.72e-07,27;UBERON:0001004,2.29e-07,42;UBERON:0000926,3.04e-07,120;UBERON:0004120,3.04e-07,120;UBERON:0006603,3.04e-07,120|phase1_expression=0.320297694209588,0,0,0,0,0,0,0,0.140788722151667,0,1.88339765048055,0,1.88320802924326,0,5.66286595086627,3.03712901084739,9.79386629379405,6.94016763788123,7.81552271552711,8.48779303596061,0,1.78723712161594,1.04479915655574,0,0,0,0,0,0,0,0,0,0,0,4.91047753577167,4.98703936075477,3.87921776898501,0.837063261473815,0,0.523523743973798,2.94115744015507,0.683045484958446,0.971020706062307,0,0.101376931219515,0,0,0,0,0,0,0,1.8456086666351,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.15945795480671,0,0,0,0.649776417447669,0,0,0,0,0,0.14084341977668,0,0,0,4.11332977921307,2.53359865475099,4.54972000513305,0,8.02707439306232,0.29688427812965,0.346970653532272,0,0.230615497256059,0.150722640552623,0.23517741427141,0.251333182659351,0,1.87979163995885,1.76922110389975,0.647067399789637,2.87093973998512,2.42437626567611,0,0,0,2.81002760729451,0.599075622529601,0,0.254140454146129,0,0,0,0,0.255715457330331,0,0.162241263067758,0.203678727700633,4.10543003013307,2.0217820674694,0.841767423545896,0,0,0.180062129805349,0.452114453507145,0.408218994907967,1.0249097622788,1.12442069471675,2.06962696591213,0.215567992932842,0,0,0,0,0,0,0,0,0,1.13665399758237,0,0,0,0,0,0,0.232533944750408,0.268273401399619,0,0,0.164167464079095,0.243206428637567,0.730999937126662,0.219550115291051,1.20785776884335,0,0,0.660837565967596,0.793351699990633,0,0,0.257734922644187,0,0,0.380451252225118,1.89811624617805,0.329397909448022,0.251335208800269,0,0.19496408711912,0.898819408654221,0.432276099749388,1.39398891278057,0,0.228497025219458,0,0,1.16371492300575,0.280543279561274,0.316182685621286,0.885660887877613,0.470996183524124,0.123397163921801,0.889357881261447,0.667380422864376,0.196558995113203,1.12431056192427,1.01430060694251,0.964708639009667,1.2731292589071,1.43848068725405,0.486405680325106,0.274561413188081,0,0.744281895337007,0,0.252578877947112,0,0,2.40179147216586,0,0,0.339490171550376,0,0.335012514883631,0.238043640886014,0.585400943573396,0.630540576424764,0.44292937929755,0,1.3109065177259,1.89953480052485,1.59113964439663,0,0,10.8188140064188,15.1765210467603,0,0,0,0.504941854408746,0,0,0,0,0,0,0,0,0,0,0.99358059645788,0.178065603667255,0.162886959353576,5.44401405809367,0,0,0,0.377210159511796,0.590603785761546,0.307435147943927,0.516856586336442,0,0.356497378384721,2.21225730555071,0,0,0.340439605753788,0,0,0,0.177340233642274,0,0,0,0,0,3.52845436887939,0.98931751764888,0,0.301564624640779,0,0,0.874442509889552,0.18542530201051,7.51831875510552,0.206386867963223,1.66675074632741,5.65105371014073,8.33834789098253,5.94823250336959,0.169978429993855,0.559805809294632,0.967399816630967,1.90934123603023,0,0,0,0.209088296014469,0.436725127492355,0.944050424693745,0.41326727862668,1.83229159388821,0.518459893167171,3.72803587852155,0,0,0,0.194451188344048,0,0,0,0,0,0.483168241652012,0,2.8441000856536,0.810900861160657,1.64337531463724,1.42912905275575,0.716106782669926,0.79472541912506,1.56254084375959,1.03382669022204,1.21159739937777,1.295515713135,1.41156659191577,1.65678397257579,1.15454209968395,1.16876902181569,0.906921534460845,0,0,0,1.54551675225752,3.56596703357246,4.57879060668163,7.93163002592544,4.51414893631827,0,0,0,0.171853182343688,0,0,0,0.45032120322422,0,0,0.103787347584177,0,0,0,0.209613162627982,0.551530525350042,0.44449345560323,0.412070114477788,0.64183841918363,0.252697211763798,0.50695859978048,0,0.37456602987953,0.448176066834085,0.229741875822453,0.476293691283074,0.115884325944855,0,0.412085900803307,0.441596760403192,1.71434626192708,0,0.476872379894642,0.145346416632329,0.752875043322645,0.338458431566706,0.365855945745545,0.263069711437843,0.271608227691724,0.561142271657738,0.237270036248348,0.394017929502254,0.409231043169689,0.619747364743864,0,0,0.233931608445408,0.644613162144895,0.191288332068843,0.441182838239031,0.231867835620421|short_description=p1@D730005E14Rik}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:109361 | |||
|HGNC= | |||
|TSSclassifier=NA | |||
|UniProt= | |||
|association_with_transcript=0bp_to_NR_030675,uc007wuq.2_5end | |||
|cluster_id=chr15:79723547..79723567,- | |||
|description=CAGE_peak_1_at_D730005E14Rik_5end | |||
|id=chr15:79723547..79723567,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0000553,1.39e-09,6;CL:0000556,1.39e-09,6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003104!1.35e-10!131;UBERON:0009142!1.35e-10!131;UBERON:0000077!1.21e-08!97;UBERON:0004921!1.25e-08!126;UBERON:0004185!1.25e-08!126;UBERON:0001007!4.44e-08!128;UBERON:0001555!4.44e-08!128;UBERON:0007026!4.44e-08!128;UBERON:0001041!4.69e-08!92;UBERON:0000926!7.70e-08!193;UBERON:0004120!7.70e-08!193;UBERON:0006603!7.70e-08!193;UBERON:0004119!1.48e-07!130;UBERON:0000925!1.48e-07!130;UBERON:0006595!1.48e-07!130 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002193,7.48e-12,48;UBERON:0002405,7.48e-12,48;UBERON:0002390,1.05e-11,45;UBERON:0003061,1.05e-11,45;UBERON:0000077,1.20e-11,35;UBERON:0004177,2.14e-09,29;UBERON:0005057,2.14e-09,29;UBERON:0004921,1.11e-08,114;UBERON:0003887,1.51e-08,10;UBERON:0001007,2.39e-08,116;UBERON:0001555,2.39e-08,116;UBERON:0007026,2.39e-08,116;UBERON:0003081,2.39e-08,87;UBERON:0001041,4.37e-08,80;UBERON:0004119,4.97e-08,118;UBERON:0000925,4.97e-08,118;UBERON:0006595,4.97e-08,118;UBERON:0000072,1.72e-07,27;UBERON:0001004,2.29e-07,42;UBERON:0000926,3.04e-07,120;UBERON:0004120,3.04e-07,120;UBERON:0006603,3.04e-07,120 | |||
|phase1_expression=0.320297694209588,0,0,0,0,0,0,0,0.140788722151667,0,1.88339765048055,0,1.88320802924326,0,5.66286595086627,3.03712901084739,9.79386629379405,6.94016763788123,7.81552271552711,8.48779303596061,0,1.78723712161594,1.04479915655574,0,0,0,0,0,0,0,0,0,0,0,4.91047753577167,4.98703936075477,3.87921776898501,0.837063261473815,0,0.523523743973798,2.94115744015507,0.683045484958446,0.971020706062307,0,0.101376931219515,0,0,0,0,0,0,0,1.8456086666351,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.15945795480671,0,0,0,0.649776417447669,0,0,0,0,0,0.14084341977668,0,0,0,4.11332977921307,2.53359865475099,4.54972000513305,0,8.02707439306232,0.29688427812965,0.346970653532272,0,0.230615497256059,0.150722640552623,0.23517741427141,0.251333182659351,0,1.87979163995885,1.76922110389975,0.647067399789637,2.87093973998512,2.42437626567611,0,0,0,2.81002760729451,0.599075622529601,0,0.254140454146129,0,0,0,0,0.255715457330331,0,0.162241263067758,0.203678727700633,4.10543003013307,2.0217820674694,0.841767423545896,0,0,0.180062129805349,0.452114453507145,0.408218994907967,1.0249097622788,1.12442069471675,2.06962696591213,0.215567992932842,0,0,0,0,0,0,0,0,0,1.13665399758237,0,0,0,0,0,0,0.232533944750408,0.268273401399619,0,0,0.164167464079095,0.243206428637567,0.730999937126662,0.219550115291051,1.20785776884335,0,0,0.660837565967596,0.793351699990633,0,0,0.257734922644187,0,0,0.380451252225118,1.89811624617805,0.329397909448022,0.251335208800269,0,0.19496408711912,0.898819408654221,0.432276099749388,1.39398891278057,0,0.228497025219458,0,0,1.16371492300575,0.280543279561274,0.316182685621286,0.885660887877613,0.470996183524124,0.123397163921801,0.889357881261447,0.667380422864376,0.196558995113203,1.12431056192427,1.01430060694251,0.964708639009667,1.2731292589071,1.43848068725405,0.486405680325106,0.274561413188081,0,0.744281895337007,0,0.252578877947112,0,0,2.40179147216586,0,0,0.339490171550376,0,0.335012514883631,0.238043640886014,0.585400943573396,0.630540576424764,0.44292937929755,0,1.3109065177259,1.89953480052485,1.59113964439663,0,0,10.8188140064188,15.1765210467603,0,0,0,0.504941854408746,0,0,0,0,0,0,0,0,0,0,0.99358059645788,0.178065603667255,0.162886959353576,5.44401405809367,0,0,0,0.377210159511796,0.590603785761546,0.307435147943927,0.516856586336442,0,0.356497378384721,2.21225730555071,0,0,0.340439605753788,0,0,0,0.177340233642274,0,0,0,0,0,3.52845436887939,0.98931751764888,0,0.301564624640779,0,0,0.874442509889552,0.18542530201051,7.51831875510552,0.206386867963223,1.66675074632741,5.65105371014073,8.33834789098253,5.94823250336959,0.169978429993855,0.559805809294632,0.967399816630967,1.90934123603023,0,0,0,0.209088296014469,0.436725127492355,0.944050424693745,0.41326727862668,1.83229159388821,0.518459893167171,3.72803587852155,0,0,0,0.194451188344048,0,0,0,0,0,0.483168241652012,0,2.8441000856536,0.810900861160657,1.64337531463724,1.42912905275575,0.716106782669926,0.79472541912506,1.56254084375959,1.03382669022204,1.21159739937777,1.295515713135,1.41156659191577,1.65678397257579,1.15454209968395,1.16876902181569,0.906921534460845,0,0,0,1.54551675225752,3.56596703357246,4.57879060668163,7.93163002592544,4.51414893631827,0,0,0,0.171853182343688,0,0,0,0.45032120322422,0,0,0.103787347584177,0,0,0,0.209613162627982,0.551530525350042,0.44449345560323,0.412070114477788,0.64183841918363,0.252697211763798,0.50695859978048,0,0.37456602987953,0.448176066834085,0.229741875822453,0.476293691283074,0.115884325944855,0,0.412085900803307,0.441596760403192,1.71434626192708,0,0.476872379894642,0.145346416632329,0.752875043322645,0.338458431566706,0.365855945745545,0.263069711437843,0.271608227691724,0.561142271657738,0.237270036248348,0.394017929502254,0.409231043169689,0.619747364743864,0,0,0.233931608445408,0.644613162144895,0.191288332068843,0.441182838239031,0.231867835620421 | |||
|short_description=p1@D730005E14Rik | |||
}} |
Revision as of 15:41, 5 August 2015
Short description: | p1@D730005E14Rik |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_D730005E14Rik_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_NR_030675, uc007wuq.2_5end |
EntrezGene: | 109361 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
megakaryocyte progenitor cell | 1.39e-09 | 6 |
megakaryocyte | 1.39e-09 | 6 |
Ontology term | p-value | n |
---|---|---|
hemolymphoid system | 7.48e-12 | 48 |
immune system | 7.48e-12 | 48 |
hematopoietic system | 1.05e-11 | 45 |
blood island | 1.05e-11 | 45 |
mixed endoderm/mesoderm-derived structure | 1.20e-11 | 35 |
hemopoietic organ | 2.14e-09 | 29 |
immune organ | 2.14e-09 | 29 |
subdivision of digestive tract | 1.11e-08 | 114 |
intraembryonic coelom | 1.51e-08 | 10 |
digestive system | 2.39e-08 | 116 |
digestive tract | 2.39e-08 | 116 |
primitive gut | 2.39e-08 | 116 |
lateral plate mesoderm | 2.39e-08 | 87 |
foregut | 4.37e-08 | 80 |
endoderm-derived structure | 4.97e-08 | 118 |
endoderm | 4.97e-08 | 118 |
presumptive endoderm | 4.97e-08 | 118 |
segment of respiratory tract | 1.72e-07 | 27 |
respiratory system | 2.29e-07 | 42 |
mesoderm | 3.04e-07 | 120 |
mesoderm-derived structure | 3.04e-07 | 120 |
presumptive mesoderm | 3.04e-07 | 120 |