FFCP PHASE1:Hg19::chr4:88903841..88903876,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC= | |||
|TSSclassifier=not | |||
|UniProt= | |||
|association_with_transcript=170bp_to_CU675498_5end | |||
|coexpression_cluster_id=C455 | |||
|description=CAGE_peak_1_at_CU675498_5end | |||
|id=chr4:88903841..88903876,- | |||
|ontology_enrichment_celltype=CL:0000235!1.48e-07!10 | |||
|ontology_enrichment_celltype_v019=CL:0000235;2.32e-38;6!CL:0000319;8.00e-08;1!CL:0000342;1.79e-07;1!CL:0002565;1.79e-07;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000235,4.58e-38,6;CL:0000319,8.28e-08,1;CL:0000342,2.98e-07,1;CL:0002565,2.98e-07,1 | |||
|ontology_enrichment_development_v019=UBERON:0006241;3.84e-09;3!UBERON:0003057;3.84e-09;3!UBERON:0006222;1.79e-07;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:4468;5.68e-14;2!DOID:3030;8.00e-08;1!DOID:4960;1.79e-07;1!DOID:0070004;1.79e-07;1 | |||
|ontology_enrichment_disease_v019_2=DOID:4468,5.17e-14,2;DOID:3030,8.28e-08,1;DOID:4960,2.80e-07,1;DOID:0070004,2.80e-07,1 | |||
|ontology_enrichment_uberon=UBERON:0001049!6.31e-21!57;UBERON:0005068!6.31e-21!57;UBERON:0006241!6.31e-21!57;UBERON:0007135!6.31e-21!57;UBERON:0002616!4.12e-18!59;UBERON:0001017!1.42e-17!82;UBERON:0005743!1.89e-17!86;UBERON:0000073!4.09e-17!94;UBERON:0001016!4.09e-17!94;UBERON:0002780!1.60e-15!41;UBERON:0001890!1.60e-15!41;UBERON:0006240!1.60e-15!41;UBERON:0003075!2.09e-15!86;UBERON:0007284!2.09e-15!86;UBERON:0000955!2.54e-15!69;UBERON:0006238!2.54e-15!69;UBERON:0003080!5.12e-15!42;UBERON:0007023!1.09e-14!115;UBERON:0002346!2.58e-14!90;UBERON:0002020!4.97e-14!34;UBERON:0003528!4.97e-14!34;UBERON:0001893!5.78e-14!34;UBERON:0003056!4.64e-13!61;UBERON:0002791!7.47e-13!33;UBERON:0001869!1.72e-11!32;UBERON:0000200!1.85e-10!6;UBERON:0000153!3.81e-09!129;UBERON:0007811!3.81e-09!129;UBERON:0000956!1.16e-08!25;UBERON:0000203!1.16e-08!25;UBERON:0000033!1.19e-08!123;UBERON:0002298!1.37e-08!8;UBERON:0002619!1.58e-08!22;UBERON:0001950!7.35e-08!20;UBERON:0004121!8.67e-08!169;UBERON:0000924!2.17e-07!173;UBERON:0006601!2.17e-07!173;UBERON:0002308!2.17e-07!9;UBERON:0000125!2.17e-07!9;UBERON:0003076!3.42e-07!15;UBERON:0003057!3.42e-07!15;UBERON:0006331!6.43e-07!3;UBERON:0000025!9.70e-07!194 | |||
|ontology_enrichment_uberon_v019=UBERON:0002240;3.84e-09;3!UBERON:0005174;3.84e-09;3!UBERON:0001137;3.84e-09;3!UBERON:0002038;6.79e-08;1!UBERON:0009661;6.79e-08;1!UBERON:0002950;6.79e-08;1!UBERON:0001891;6.79e-08;1!UBERON:0002506;1.79e-07;1!UBERON:0001769;1.79e-07;1!UBERON:0000125;8.37e-07;9!UBERON:0002308;8.37e-07;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002240,3.54e-09,3;UBERON:0005174,3.54e-09,3;UBERON:0001137,3.54e-09,3;UBERON:0002038,7.26e-08,1;UBERON:0009661,7.26e-08,1;UBERON:0002950,7.26e-08,1;UBERON:0001891,7.26e-08,1;UBERON:0009616,7.26e-08,1;UBERON:0010286,7.26e-08,1;UBERON:0002506,2.98e-07,1;UBERON:0001769,2.98e-07,1;UBERON:0000125,8.21e-07,9;UBERON:0002308,8.21e-07,9;UBERON:0003076,8.85e-07,15;UBERON:0003057,8.85e-07,15 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.410623275218653,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.232429036905685,0,0,0,0,0,0,0,0,0,0,0.224723484445085,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.661743720148475,0,0,0.458426764241994,0,0,0,1.39303789839414,2.39324328933957,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179389635688862,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116193942869518,0.10366105501537,0.504641701751257,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.02940686179115,0,0,0,0,0,0,0,0.231860809950154,0,0,0,0,0,0,6.15542515218493,7.25413221931637,5.64798416697167,0,0,0,0,0,0,0,0,0,0,0,0.063497894292169,0.381988425558278,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.2162378064119,1.00451418286425,6.32501818449095,0,0,0,0,0,0,0,0,0,0,0.254094624222463,0,0,1.67516265334349,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.693138033939733,0,0,1.16106791782163,0,0,0,0,0,0,0,0.831076008928724,0,0,0,0,0,0,0.309123034943167,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.372158369359667,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.376575203107117,0,0,0,0,0,0,0,0,0,0,0,0,0.213648142254946,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0,0,0,0,0,0,0.281338832821026,0,0,0,0,0,0,0,0,0,0,0.358042349351218,0,0,0,0,0,0.556608588971108,0,0,0,0,0.568967241427498,0.254253650292766,0,0,0,0,0,0.482385754501632,0,0,0.295547618953547,0,0,0,0.0769502585037971,0,0,0,0,0.31900115973192,0.0915975934018623,0.533034776018635,0,0,0,0,0,0,0,0,4.85295548414462,2.93819054686466,0,0,0,0,0,0,0,0,0.606610196826093,0,1.63985112007737,0.182454789215666,0,0,0,0,0,0,0,0,0,0,0,0,4.83836228250648,3.88289084436788,0,0,0,0,0,0,0,0,0,0,0.677942222341597,0,0,0.0633107959558787,0,0.400794101257669,0.426905989478705,0,0,0,0,0,0,0,0,0,0,0,0,1.09524303113594,0,0,0,0,0,0,0,0,0,0.0671834724867263,0,0,0.157566364614447,0.164831716762333,0.337017719270924,0.295282444544246,0,0,0.817220436669454,0,0.137539436597234,0,0,0,0.0607495566580247,0,10.9539933145885,0.104909176269996,0,5.1993328406525,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258565912723101,1.85125642439766,0.342173675768659,0,0,0,0,0,0,0,0,0,0,0,0,0,0.886068179966986,0.122026264901963,0.500763722825999,0,1.22021956690538,0.248385611765534,0,0,1.21319294033318,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.414706207840855,0.53168342911599,0,0.300515217994437,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.79369063011563,0,0,0.138258436151731,0,0,0,0,3.68659363130579,0,0,0,1.03328987796489,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.128458450192919,0,0.638535436228605,0,0,0,0.484426936895553,0,0,0,0,0,0,0,0,0.150420656698515,0,1.56302802246618,0,0,0,0.337687923091973,0,0,0.126831620387814,0.546974809018219,0,0,0,0,0,0.336283722218824,0,0,0.975726071789027,0,0,0.543757863814654,0.328863867814245,0,0,0,0,0,0.913158720509496,0.863710364874486,1.43325506366115,0.142953088353313,0,0,0,0,0,0,0,0,0.354996002191696,0.255640214277473,0,0,0,0,0.223710863595585,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.17785080268967,1.78227840196252,0,0,0,0.0644578879735772,0,0,0,0,0,0,4.30018749454354,0,0,0,0,0,0,0,1.89249637252618,0.218531143927391,0,0,0,0,0,0.0757786982182394,0,0,1.65492793379032,0.213233981900981,0,0,0.0620747142958579,0,0,0,0,0,0,0,0.332660356546013,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p1@CU675498 | |||
}} |
Revision as of 02:11, 22 January 2014
Short description: | p1@CU675498 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_CU675498_5end |
Coexpression cluster: | C455_kidney_Macrophage_clear_endometrial_Monocytederived_large_spinal |
Association with transcript: | 170bp_to_CU675498_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
macrophage | 4.58e-38 | 6 |
mucus secreting cell | 8.28e-08 | 1 |
pigment cell (sensu Vertebrata) | 2.98e-07 | 1 |
iris pigment epithelial cell | 2.98e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
spinal cord | 3.54e-09 | 3 |
dorsal region element | 3.54e-09 | 3 |
dorsum | 3.54e-09 | 3 |
substantia nigra | 7.26e-08 | 1 |
midbrain nucleus | 7.26e-08 | 1 |
regional part of midbrain | 7.26e-08 | 1 |
midbrain | 7.26e-08 | 1 |
presumptive midbrain | 7.26e-08 | 1 |
midbrain neural tube | 7.26e-08 | 1 |
iris epithelium | 2.98e-07 | 1 |
iris | 2.98e-07 | 1 |
neural nucleus | 8.21e-07 | 9 |
nucleus of brain | 8.21e-07 | 9 |
posterior neural tube | 8.85e-07 | 15 |
chordal neural plate | 8.85e-07 | 15 |
Ontology term | p-value | n |
---|---|---|
clear cell adenocarcinoma | 5.17e-14 | 2 |
mucinous adenocarcinoma | 8.28e-08 | 1 |
bone marrow cancer | 2.80e-07 | 1 |
myeloma | 2.80e-07 | 1 |