FFCP PHASE1:Hg19::chr5:107007546..107007567,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=weak | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr5:107007546..107007567,- | |||
|id=chr5:107007546..107007567,- | |||
|ontology_enrichment_celltype=CL:0000066!7.79e-28!254;CL:1000507!7.53e-08!12;CL:1000494!7.53e-08!12 | |||
|ontology_enrichment_celltype_v019=CL:1000507;3.86e-19;10!CL:1000494;3.86e-19;10!CL:1000497;3.01e-12;17!CL:0002518;3.01e-12;17!CL:1000449;6.66e-12;15!CL:0000306;9.14e-08;4!CL:0002222;9.14e-08;4!CL:0002224;9.14e-08;4!CL:0000075;1.16e-07;27!CL:0002681;1.60e-07;12!CL:0002584;1.60e-07;12!CL:0002577;3.25e-07;3!CL:0000064;4.31e-07;3!CL:0000067;4.31e-07;3!CL:0005012;4.31e-07;3!CL:0002304;4.31e-07;3!CL:0000239;9.65e-07;3!CL:1000615;9.65e-07;3!CL:0002306;9.65e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,4.73e-27,253;CL:1000507,3.03e-19,10;CL:1000494,3.03e-19,10;CL:1000497,2.80e-12,17;CL:0002518,2.80e-12,17;CL:1000449,5.70e-12,15;CL:0000306,7.93e-08,4;CL:0002222,7.93e-08,4;CL:0002224,7.93e-08,4;CL:0002681,1.55e-07,12;CL:0002584,1.55e-07,12;CL:0000075,1.55e-07,27;CL:0000064,3.26e-07,3;CL:0000067,3.26e-07,3;CL:0005012,3.26e-07,3;CL:0002304,3.26e-07,3;CL:0002577,3.98e-07,3 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:305!2.83e-12!106;DOID:0050687!1.54e-11!143 | |||
|ontology_enrichment_disease_v019=DOID:4556;4.31e-07;3!DOID:3908;9.51e-07;5 | |||
|ontology_enrichment_disease_v019_2=DOID:4556,3.13e-07,3;DOID:305,3.77e-07,106 | |||
|ontology_enrichment_uberon=UBERON:0000481!1.36e-12!347;UBERON:0000064!1.11e-11!219;UBERON:0000119!2.28e-10!312;UBERON:0000922!6.23e-10!612;UBERON:0000483!8.02e-10!309;UBERON:0000475!5.07e-09!365;UBERON:0002050!7.38e-09!605;UBERON:0005423!7.38e-09!605;UBERON:0000468!7.79e-09!659;UBERON:0003104!1.01e-08!238;UBERON:0009142!1.01e-08!238;UBERON:0000923!1.15e-08!604;UBERON:0005291!1.15e-08!604;UBERON:0006598!1.15e-08!604;UBERON:0002532!1.15e-08!604;UBERON:0000020!2.19e-08!23;UBERON:0000467!2.93e-08!625;UBERON:0000480!3.97e-08!626;UBERON:0000970!4.66e-08!20;UBERON:0000019!4.89e-08!19;UBERON:0000047!4.89e-08!19;UBERON:0004088!4.89e-08!19;UBERON:0003072!4.89e-08!19;UBERON:0003071!4.89e-08!19;UBERON:0004128!4.89e-08!19;UBERON:0006554!5.69e-08!44;UBERON:0001456!6.29e-08!21;UBERON:0007625!7.47e-08!11;UBERON:0005177!7.48e-08!107;UBERON:0009773!7.53e-08!12;UBERON:0001231!7.53e-08!12;UBERON:0004810!7.53e-08!12;UBERON:0000062!7.74e-08!511;UBERON:0001032!1.03e-07!24;UBERON:0004456!1.03e-07!24;UBERON:0001008!1.51e-07!45;UBERON:0002113!1.90e-07!27;UBERON:0003918!1.90e-07!27;UBERON:0005095!1.90e-07!27;UBERON:0007687!1.90e-07!27;UBERON:0004119!2.30e-07!169;UBERON:0000925!2.30e-07!169;UBERON:0006595!2.30e-07!169;UBERON:0002104!2.42e-07!21;UBERON:0001801!3.02e-07!14;UBERON:0001444!6.04e-07!48;UBERON:0000058!7.97e-07!26;UBERON:0002200!9.87e-07!11;UBERON:0006876!9.87e-07!11 | |||
|ontology_enrichment_uberon_v019=UBERON:0004211;3.86e-19;10!UBERON:0009773;3.86e-19;10!UBERON:0001231;3.86e-19;10!UBERON:0004810;3.86e-19;10!UBERON:0002113;2.30e-13;24!UBERON:0011143;2.30e-13;24!UBERON:0006554;2.46e-13;30!UBERON:0001008;2.46e-13;30!UBERON:0000489;5.72e-12;29!UBERON:0006555;6.66e-12;15!UBERON:0004819;6.66e-12;15!UBERON:0001285;6.66e-12;15!UBERON:0007684;6.66e-12;15!UBERON:0007625;3.83e-10;11!UBERON:0001801;1.52e-09;14!UBERON:0002394;5.57e-09;4!UBERON:0003928;5.57e-09;4!UBERON:0000488;1.77e-08;4!UBERON:0010077;9.14e-08;4!UBERON:0005389;9.14e-08;4!UBERON:0000484;9.14e-08;4!UBERON:0000965;9.14e-08;4!UBERON:0001803;9.14e-08;4!UBERON:0002294;1.28e-07;7!UBERON:0001173;1.28e-07;7!UBERON:0000020;1.35e-07;23!UBERON:0000353;1.59e-07;15!UBERON:0001225;1.60e-07;12!UBERON:0008987;1.60e-07;12!UBERON:0001851;2.44e-07;15!UBERON:0001456;3.20e-07;21!UBERON:0001032;3.54e-07;24!UBERON:0004456;3.54e-07;24!UBERON:0001778;4.31e-07;3!UBERON:0001775;4.31e-07;3!UBERON:0006853;9.65e-07;3!UBERON:0007685;9.65e-07;3!UBERON:0004134;9.65e-07;3 | |||
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| |||
|short_description=p@chr5:107007546..107007567,- | |||
}} |
Revision as of 06:47, 22 January 2014
Short description: | p@chr5:107007546..107007567, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr5:107007546..107007567, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 4.73e-27 | 253 |
kidney tubule cell | 3.03e-19 | 10 |
nephron tubule epithelial cell | 3.03e-19 | 10 |
kidney cell | 2.80e-12 | 17 |
kidney epithelial cell | 2.80e-12 | 17 |
epithelial cell of nephron | 5.70e-12 | 15 |
crystallin accumulating cell | 7.93e-08 | 4 |
vertebrate lens cell | 7.93e-08 | 4 |
lens epithelial cell | 7.93e-08 | 4 |
kidney cortical cell | 1.55e-07 | 12 |
renal cortical epithelial cell | 1.55e-07 | 12 |
columnar/cuboidal epithelial cell | 1.55e-07 | 27 |
ciliated cell | 3.26e-07 | 3 |
ciliated epithelial cell | 3.26e-07 | 3 |
multi-ciliated epithelial cell | 3.26e-07 | 3 |
non-pigmented ciliary epithelial cell | 3.26e-07 | 3 |
placental epithelial cell | 3.98e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
lung large cell carcinoma | 3.13e-07 | 3 |
carcinoma | 3.77e-07 | 106 |