FFCP PHASE1:Mm9::chr16:46010325..46010336,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|EntrezGene=433022|HGNC=|MCL_coexpression_id=7|UniProt=B2RXA1|association_with_transcript=0bp_to_ENSMUST00000130481_5end|description=CAGE_peak_4_at_Plcxd2_5end|id=chr16:46010325..46010336,-|ontology_enrichment_celltype=CL:0000791!6.68e-10!9;CL:0000789!6.68e-10!9;CL:0002420!6.68e-10!9;CL:0002419!6.68e-10!9;CL:0000790!6.68e-10!9;CL:0000624!5.93e-09!8;CL:0000838!5.70e-08!12;CL:0000084!1.85e-07!11;CL:0000827!1.85e-07!11;CL:0000893!4.33e-07!6;CL:0002489!4.33e-07!6;CL:0000898!4.33e-07!6;CL:0000809!4.33e-07!6;CL:0000810!4.33e-07!6;CL:0000895!4.33e-07!6;CL:0000808!4.33e-07!6;CL:0000894!4.33e-07!6;CL:0000806!4.33e-07!6;CL:0000807!4.33e-07!6;CL:0000805!4.33e-07!6;CL:0002425!4.33e-07!6;CL:0002436!4.33e-07!6;CL:0002427!4.33e-07!6;CL:0002428!4.33e-07!6;CL:0002429!4.33e-07!6;CL:0002433!4.33e-07!6;CL:0002431!4.33e-07!6;CL:0002432!4.33e-07!6;CL:0000542!4.54e-07!13;CL:0000051!4.54e-07!13|ontology_enrichment_celltype_v019_2=CL:0000791,6.65e-29,9;CL:0000789,6.65e-29,9;CL:0002420,6.65e-29,9;CL:0002419,6.65e-29,9;CL:0000790,6.65e-29,9;CL:0000624,8.69e-26,8;CL:0000084,2.33e-23,11;CL:0000827,2.33e-23,11;CL:0000838,2.80e-21,12;CL:0000893,1.10e-19,6;CL:0002489,1.10e-19,6;CL:0000898,1.10e-19,6;CL:0000809,1.10e-19,6;CL:0000810,1.10e-19,6;CL:0000895,1.10e-19,6;CL:0000808,1.10e-19,6;CL:0000894,1.10e-19,6;CL:0000806,1.10e-19,6;CL:0000807,1.10e-19,6;CL:0000805,1.10e-19,6;CL:0002425,1.10e-19,6;CL:0002436,1.10e-19,6;CL:0002427,1.10e-19,6;CL:0002428,1.10e-19,6;CL:0002429,1.10e-19,6;CL:0002433,1.10e-19,6;CL:0002431,1.10e-19,6;CL:0002432,1.10e-19,6;CL:0000542,1.61e-19,13;CL:0000051,1.61e-19,13;CL:0000738,7.99e-18,17;CL:0002087,7.99e-18,17;CL:0002031,1.63e-11,25;CL:0002320,2.37e-11,46;CL:0000134,2.37e-11,46;CL:0000182,5.51e-11,5;CL:0000219,3.09e-09,54;CL:0000988,1.39e-08,32;CL:0002032,1.39e-08,32;CL:0000037,1.39e-08,32;CL:0000837,1.39e-08,32|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0007811!2.41e-12!86;UBERON:0000153!3.46e-11!94;UBERON:0005057!5.87e-09!51;UBERON:0000477!2.85e-08!154;UBERON:0002405!7.47e-08!70;UBERON:0000475!8.61e-08!200;UBERON:0001049!1.54e-07!52;UBERON:0005068!1.54e-07!52;UBERON:0006241!1.54e-07!52;UBERON:0007135!1.54e-07!52;UBERON:0002020!3.43e-07!34;UBERON:0000955!5.68e-07!50;UBERON:0006238!5.68e-07!50;UBERON:0000033!6.20e-07!63;UBERON:0002530!6.42e-07!65;UBERON:0003408!6.80e-07!24;UBERON:0003929!7.33e-07!55|ontology_enrichment_uberon_v019_2=UBERON:0003929,9.94e-12,55;UBERON:0002384,2.37e-11,46;UBERON:0002368,1.79e-10,60;UBERON:0002107,3.01e-10,22;UBERON:0007499,3.01e-10,22;UBERON:0006925,3.01e-10,22;UBERON:0009497,3.01e-10,22;UBERON:0000015,3.01e-10,22;UBERON:0002423,3.01e-10,22;UBERON:0006235,3.01e-10,22;UBERON:0008835,3.01e-10,22;UBERON:0003894,3.01e-10,22;UBERON:0004161,3.01e-10,22;UBERON:0008836,3.01e-10,22;UBERON:0009854,9.79e-10,23;UBERON:0009856,9.79e-10,23;UBERON:0002530,2.06e-09,65;UBERON:0000949,2.37e-09,72;UBERON:0000490,3.22e-09,66;UBERON:0002365,7.80e-09,25;UBERON:0002330,7.80e-09,25;UBERON:0005911,1.13e-08,69;UBERON:0001041,4.95e-07,80|phase1_expression=0.320297694209588,0,0,0,0,0,0,3.48632973292256,25.3419699873,19.1932911584035,3.4243593645101,3.90883579077148,2.05440875917447,1.66098764596095,0,0.202475267389826,0,0.473193248037357,0.274228867211478,0.42438965179803,0.17008658030214,0,0,0,0,0,0,0,0.380046838912748,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125896817975577,0,0.183546752161682,0,0,0,0,0,0,0.503347818173209,3.62681071005672,3.6970317905671,0,0.286533439938757,0,0,0,0,0,0,0,0,0,0,0,0,0.135005938331691,0,0.571301968807607,0.662605622854841,0.122490799214954,0.0958454710182364,0,2.20231761998777,0.383062014255563,0.921639199537461,0,0.182975287204819,0.52091337055676,0.558365998002762,0,0.30559649555362,0.294628585473668,0.569486723196412,0.559198337475902,0.075726193333184,0,0,0.860423876981386,2.719885334831,3.77792234146472,2.59910566979068,4.03224198387602,0.561777680527007,0,0,0,0,0,0,0,0,0,0,1.02765491747154,0.517875767294343,0,0,0,0,0,0.117588707135705,0,0,0,0,0,0,0,0,0.292780797011547,0.628340120440365,0.255457055208591,0.239630249011841,0,0.254140454146129,1.3481157546434,0.457500602818626,0.879580464790051,1.04294592115366,0.511430914660661,0.62336413367868,0.324482526135515,0,0,0,0,0,0,0,0,0.204109497453984,0.2562274405697,0.187403449119458,1.03481348295606,0,0,0,0,0,0,0.205782136407943,0,0,0,0.568326998791185,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102904612379284,0,0,0,0,0,0,0.22237804384487,0,0,0,0,0,0.19496408711912,0,0,0,0,0,0,0,0,0,0,0,0,0.246794327843601,1.48226313543574,0,0,0,0.202860121388503,0,0,0.287696137450811,0.162135226775035,0,0,1.11642284300551,1.24815069245824,0.757736633841335,2.15276896226295,3.37710464954357,0.184753190166605,0,0.162964976442026,0,0,0,0,0,0,0,0,0,0,0,1.50791283939272,0,0.491764273019036,0.275936746304732,0.642202359951168,0.703270119553219,0,0.252470927204373,0,0,0,0,0,0,0,0.292255857911312,0,0.321321316421807,0,0,0,0,0,0,0.302323556964751,0,0,0,0.775284879504663,0,0,0,1.05418608574999,0,0,0,0,0,0,0,0.164549020602121,0,0,0,0,0,0,0,0,0,0,0.18542530201051,0.512612642393558,0,0,0,0,0,0.339956859987711,0.419854356970974,0.414599921413271,0,0,0,0,0,0,0.134864346384821,0,0,0,0.621339313086926,0,0,0,0,0,0,0,0,0,0,0.288030006257865,0.948033361884535,0,0,0,0.358053391334963,0,0.480781798079875,0.147689527174577,0.706765149637033,0.228620419965,0.201652370273681,0.487289403698762,0.673482891482306,1.16876902181569,0,0,0.0897138566094757,0,0,0,0,0,0,0.564751842617067,0.920650473014354,1.14579102687879,0.515559547031063,2.05524755931193,1.5107877947794,0.675022500231806,0.45032120322422,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188626341386076,0,0.0640251524048693,0,0,0.231768651889711,0,0.412085900803307,0.147198920134397,0,0,0,0,0.0941093804153306,0,0.182927972872773,0,0.135804113845862,0,0,0.197008964751127,0,0,0,0,0,0,0.191288332068843,0,0|short_description=p4@Plcxd2}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:433022 | |||
|HGNC= | |||
|MCL_coexpression_id=7 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:B2RXA1 | |||
|association_with_transcript=0bp_to_ENSMUST00000130481_5end | |||
|cluster_id=chr16:46010325..46010336,- | |||
|description=CAGE_peak_4_at_Plcxd2_5end | |||
|id=chr16:46010325..46010336,- | |||
|ontology_enrichment_celltype=CL:0000791!6.68e-10!9;CL:0000789!6.68e-10!9;CL:0002420!6.68e-10!9;CL:0002419!6.68e-10!9;CL:0000790!6.68e-10!9;CL:0000624!5.93e-09!8;CL:0000838!5.70e-08!12;CL:0000084!1.85e-07!11;CL:0000827!1.85e-07!11;CL:0000893!4.33e-07!6;CL:0002489!4.33e-07!6;CL:0000898!4.33e-07!6;CL:0000809!4.33e-07!6;CL:0000810!4.33e-07!6;CL:0000895!4.33e-07!6;CL:0000808!4.33e-07!6;CL:0000894!4.33e-07!6;CL:0000806!4.33e-07!6;CL:0000807!4.33e-07!6;CL:0000805!4.33e-07!6;CL:0002425!4.33e-07!6;CL:0002436!4.33e-07!6;CL:0002427!4.33e-07!6;CL:0002428!4.33e-07!6;CL:0002429!4.33e-07!6;CL:0002433!4.33e-07!6;CL:0002431!4.33e-07!6;CL:0002432!4.33e-07!6;CL:0000542!4.54e-07!13;CL:0000051!4.54e-07!13 | |||
|ontology_enrichment_celltype_v019_2=CL:0000791,6.65e-29,9;CL:0000789,6.65e-29,9;CL:0002420,6.65e-29,9;CL:0002419,6.65e-29,9;CL:0000790,6.65e-29,9;CL:0000624,8.69e-26,8;CL:0000084,2.33e-23,11;CL:0000827,2.33e-23,11;CL:0000838,2.80e-21,12;CL:0000893,1.10e-19,6;CL:0002489,1.10e-19,6;CL:0000898,1.10e-19,6;CL:0000809,1.10e-19,6;CL:0000810,1.10e-19,6;CL:0000895,1.10e-19,6;CL:0000808,1.10e-19,6;CL:0000894,1.10e-19,6;CL:0000806,1.10e-19,6;CL:0000807,1.10e-19,6;CL:0000805,1.10e-19,6;CL:0002425,1.10e-19,6;CL:0002436,1.10e-19,6;CL:0002427,1.10e-19,6;CL:0002428,1.10e-19,6;CL:0002429,1.10e-19,6;CL:0002433,1.10e-19,6;CL:0002431,1.10e-19,6;CL:0002432,1.10e-19,6;CL:0000542,1.61e-19,13;CL:0000051,1.61e-19,13;CL:0000738,7.99e-18,17;CL:0002087,7.99e-18,17;CL:0002031,1.63e-11,25;CL:0002320,2.37e-11,46;CL:0000134,2.37e-11,46;CL:0000182,5.51e-11,5;CL:0000219,3.09e-09,54;CL:0000988,1.39e-08,32;CL:0002032,1.39e-08,32;CL:0000037,1.39e-08,32;CL:0000837,1.39e-08,32 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007811!2.41e-12!86;UBERON:0000153!3.46e-11!94;UBERON:0005057!5.87e-09!51;UBERON:0000477!2.85e-08!154;UBERON:0002405!7.47e-08!70;UBERON:0000475!8.61e-08!200;UBERON:0001049!1.54e-07!52;UBERON:0005068!1.54e-07!52;UBERON:0006241!1.54e-07!52;UBERON:0007135!1.54e-07!52;UBERON:0002020!3.43e-07!34;UBERON:0000955!5.68e-07!50;UBERON:0006238!5.68e-07!50;UBERON:0000033!6.20e-07!63;UBERON:0002530!6.42e-07!65;UBERON:0003408!6.80e-07!24;UBERON:0003929!7.33e-07!55 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003929,9.94e-12,55;UBERON:0002384,2.37e-11,46;UBERON:0002368,1.79e-10,60;UBERON:0002107,3.01e-10,22;UBERON:0007499,3.01e-10,22;UBERON:0006925,3.01e-10,22;UBERON:0009497,3.01e-10,22;UBERON:0000015,3.01e-10,22;UBERON:0002423,3.01e-10,22;UBERON:0006235,3.01e-10,22;UBERON:0008835,3.01e-10,22;UBERON:0003894,3.01e-10,22;UBERON:0004161,3.01e-10,22;UBERON:0008836,3.01e-10,22;UBERON:0009854,9.79e-10,23;UBERON:0009856,9.79e-10,23;UBERON:0002530,2.06e-09,65;UBERON:0000949,2.37e-09,72;UBERON:0000490,3.22e-09,66;UBERON:0002365,7.80e-09,25;UBERON:0002330,7.80e-09,25;UBERON:0005911,1.13e-08,69;UBERON:0001041,4.95e-07,80 | |||
|phase1_expression=0.320297694209588,0,0,0,0,0,0,3.48632973292256,25.3419699873,19.1932911584035,3.4243593645101,3.90883579077148,2.05440875917447,1.66098764596095,0,0.202475267389826,0,0.473193248037357,0.274228867211478,0.42438965179803,0.17008658030214,0,0,0,0,0,0,0,0.380046838912748,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125896817975577,0,0.183546752161682,0,0,0,0,0,0,0.503347818173209,3.62681071005672,3.6970317905671,0,0.286533439938757,0,0,0,0,0,0,0,0,0,0,0,0,0.135005938331691,0,0.571301968807607,0.662605622854841,0.122490799214954,0.0958454710182364,0,2.20231761998777,0.383062014255563,0.921639199537461,0,0.182975287204819,0.52091337055676,0.558365998002762,0,0.30559649555362,0.294628585473668,0.569486723196412,0.559198337475902,0.075726193333184,0,0,0.860423876981386,2.719885334831,3.77792234146472,2.59910566979068,4.03224198387602,0.561777680527007,0,0,0,0,0,0,0,0,0,0,1.02765491747154,0.517875767294343,0,0,0,0,0,0.117588707135705,0,0,0,0,0,0,0,0,0.292780797011547,0.628340120440365,0.255457055208591,0.239630249011841,0,0.254140454146129,1.3481157546434,0.457500602818626,0.879580464790051,1.04294592115366,0.511430914660661,0.62336413367868,0.324482526135515,0,0,0,0,0,0,0,0,0.204109497453984,0.2562274405697,0.187403449119458,1.03481348295606,0,0,0,0,0,0,0.205782136407943,0,0,0,0.568326998791185,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102904612379284,0,0,0,0,0,0,0.22237804384487,0,0,0,0,0,0.19496408711912,0,0,0,0,0,0,0,0,0,0,0,0,0.246794327843601,1.48226313543574,0,0,0,0.202860121388503,0,0,0.287696137450811,0.162135226775035,0,0,1.11642284300551,1.24815069245824,0.757736633841335,2.15276896226295,3.37710464954357,0.184753190166605,0,0.162964976442026,0,0,0,0,0,0,0,0,0,0,0,1.50791283939272,0,0.491764273019036,0.275936746304732,0.642202359951168,0.703270119553219,0,0.252470927204373,0,0,0,0,0,0,0,0.292255857911312,0,0.321321316421807,0,0,0,0,0,0,0.302323556964751,0,0,0,0.775284879504663,0,0,0,1.05418608574999,0,0,0,0,0,0,0,0.164549020602121,0,0,0,0,0,0,0,0,0,0,0.18542530201051,0.512612642393558,0,0,0,0,0,0.339956859987711,0.419854356970974,0.414599921413271,0,0,0,0,0,0,0.134864346384821,0,0,0,0.621339313086926,0,0,0,0,0,0,0,0,0,0,0.288030006257865,0.948033361884535,0,0,0,0.358053391334963,0,0.480781798079875,0.147689527174577,0.706765149637033,0.228620419965,0.201652370273681,0.487289403698762,0.673482891482306,1.16876902181569,0,0,0.0897138566094757,0,0,0,0,0,0,0.564751842617067,0.920650473014354,1.14579102687879,0.515559547031063,2.05524755931193,1.5107877947794,0.675022500231806,0.45032120322422,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188626341386076,0,0.0640251524048693,0,0,0.231768651889711,0,0.412085900803307,0.147198920134397,0,0,0,0,0.0941093804153306,0,0.182927972872773,0,0.135804113845862,0,0,0.197008964751127,0,0,0,0,0,0,0.191288332068843,0,0 | |||
|short_description=p4@Plcxd2 | |||
}} |
Revision as of 21:10, 3 August 2015
Short description: | p4@Plcxd2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_Plcxd2_5end |
Coexpression cluster: | MCL_coexpression_mm9:7 |
Association with transcript: | 0bp_to_ENSMUST00000130481_5end |
EntrezGene: | 433022 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
gut epithelium | 9.94e-12 | 55 |
connective tissue | 2.37e-11 | 46 |
endocrine gland | 1.79e-10 | 60 |
liver | 3.01e-10 | 22 |
epithelial sac | 3.01e-10 | 22 |
digestive gland | 3.01e-10 | 22 |
epithelium of foregut-midgut junction | 3.01e-10 | 22 |
anatomical boundary | 3.01e-10 | 22 |
hepatobiliary system | 3.01e-10 | 22 |
foregut-midgut junction | 3.01e-10 | 22 |
hepatic diverticulum | 3.01e-10 | 22 |
liver primordium | 3.01e-10 | 22 |
septum transversum | 3.01e-10 | 22 |
liver bud | 3.01e-10 | 22 |
digestive tract diverticulum | 9.79e-10 | 23 |
sac | 9.79e-10 | 23 |
gland | 2.06e-09 | 65 |
endocrine system | 2.37e-09 | 72 |
unilaminar epithelium | 3.22e-09 | 66 |
exocrine gland | 7.80e-09 | 25 |
exocrine system | 7.80e-09 | 25 |
endo-epithelium | 1.13e-08 | 69 |
foregut | 4.95e-07 | 80 |