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FFCP PHASE1:Mm9::chr17:36117183..36117198,-: Difference between revisions

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{{FFCP|EntrezGene=75210|HGNC=|UniProt=Q811B5|association_with_transcript=-2bp_to_ENSMUST00000055454_5end|description=CAGE_peak_4_at_Prr3_5end|id=chr17:36117183..36117198,-|ontology_enrichment_celltype=CL:0000542!6.09e-07!13;CL:0000051!6.09e-07!13;CL:0000838!6.90e-07!12|ontology_enrichment_celltype_v019_2=CL:0000542,1.64e-07,13;CL:0000051,1.64e-07,13;CL:0000838,1.89e-07,12;CL:0000738,3.64e-07,17;CL:0002087,3.64e-07,17;CL:0000791,4.99e-07,9;CL:0000789,4.99e-07,9;CL:0002420,4.99e-07,9;CL:0002419,4.99e-07,9;CL:0000790,4.99e-07,9;CL:0000084,9.66e-07,11;CL:0000827,9.66e-07,11|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=|ontology_enrichment_uberon_v019_2=UBERON:0000926,2.02e-07,120;UBERON:0004120,2.02e-07,120;UBERON:0006603,2.02e-07,120;UBERON:0002370,5.61e-07,23;UBERON:0000974,5.61e-07,23;UBERON:0004807,5.61e-07,23;UBERON:0005058,5.61e-07,23;UBERON:0003351,5.61e-07,23;UBERON:0009113,5.61e-07,23;UBERON:0003295,5.61e-07,23;UBERON:0009722,5.61e-07,23;UBERON:0005562,5.61e-07,23;UBERON:0007690,5.61e-07,23;UBERON:0003408,6.17e-07,24|phase1_expression=0.960893082628764,0,0,0.30246421130683,1.00179145989269,0.16787927191189,0.467225281191051,4.26106967357202,5.91312633037,3.27690336850791,1.88339765048055,1.59544317990673,4.62241970814255,4.10875891369288,1.66554880907831,0.404950534779652,0,2.05050407482854,1.91960207048034,0.84877930359606,0.510259740906419,1.68794617041505,1.04479915655574,0.47997726838022,0,0.57423196411502,0,0.215471232685889,0.190023419456374,0.252030129759931,0.221730510655305,0.635030673459631,1.23012957516914,0,0,0.166234645358492,0,2.92972141515835,3.1253413780952,0.523523743973798,3.52938892818609,0.683045484958446,2.42755176515577,1.1330713617802,1.52065396829272,1.10128051297009,2.34717403304412,0,0.439372365468944,1.1665793944457,0.419959264876088,0,4.36234775750115,7.97898356212479,8.06625117941913,0.257259436035947,0.573066879877513,1.54701627683233,2.02316460859598,3.1739458756322,2.53532561402472,1.35537812827653,0.889294796111139,0.899899717281399,2.96659908770092,1.4209602298922,1.79760066311043,1.53687322128622,0.311068836925433,0.675029691658453,0.420649922702764,1.99955689082663,2.42955395046775,1.10241719293459,0.670918297127655,0.919218786610021,2.20231761998777,0.383062014255563,1.0752457327937,2.37395317914349,1.55528994124096,1.04182674111352,0,0.56276261003168,0.763991238884051,3.83017161115768,1.28134512719193,2.60959224155421,0.530083353332288,0.453429360640713,1.15945795480671,0,0,0,0,0.448026887097336,0.561777680527007,0.511290967734173,1.03914401841148,0.70667914902068,1.54927761754349,0,0,7.11066703153331,0.216491041011214,0.253359865475099,0,0.79928715803342,1.55362730188303,1.48442139064825,1.38788261412909,1.82679286987285,1.38369298353635,1.65794904607885,3.52766121407114,0.502666365318702,1.23597483867187,0.578397427679647,1.76922110389975,1.45590164952668,1.10420759230197,0.484875253135222,0,1.17112318804619,0.83778682725382,0,1.67741174308288,2.99951365496704,1.52484272487678,1.04853447583376,1.37250180845588,4.77486538028885,0.869121600961382,1.02286182932132,1.0389402227978,0.973447578406546,2.03678727700633,1.24406970610093,0.505445516867349,0.210441855886474,1.69156575851515,1.14951052216736,0.360124259610698,1.50704817835715,1.56483948048054,2.0498195245576,1.49922759295566,2.32833033665114,0.431135985865684,1.51284864134255,2.81521798662318,1.97276159184817,0.278047249225598,0.696504333044333,1.64625709126355,2.7864797354589,2.1066395619397,1.02939162845886,1.70498099637356,0.621377317606506,0.703578179943289,0.540186184383045,0.473489471170421,1.18058539048442,0.925602677324269,0.697601834251224,0,1.28441876603886,0.329119699826961,0.492502392237286,0.972825714550269,0.292399974850665,0.878200461164203,0.268412837520744,0.420579897128254,2.98423375899925,0.330418782983798,0,1.49301775374664,1.85789337488351,0.515469845288373,0.201683524623343,0.22237804384487,0.760902504450237,1.42358718463353,0.494096864172033,0.251335208800269,1.1937388322469,1.16978452271472,1.79763881730844,0.216138049874694,0.796565093017469,1.51734320762465,1.02823661348756,0,1.01825663922657,1.35766741017338,1.68325967736765,1.3279672796094,0.885660887877613,0.31399745568275,0.987177311374404,0,0.333690211432188,0.196558995113203,0.224862112384854,0,0.482354319504834,0,0.575392274901621,0.486405680325106,0,0,1.48856379067401,0.936113019343682,0.757736633841335,0.358794827043824,1.4473305640901,1.29327233116623,0.947457058852424,1.14075483509418,1.01847051465113,0.938760993154008,0.335012514883631,0.476087281772027,0.585400943573396,1.7339865851681,1.10732344824387,0.478364305972461,2.13022309130459,1.20879487306127,0.433947175744535,1.50791283939272,0,0.491764273019036,1.37968373152366,0.963303539926752,1.17211686592203,0.655739781506702,0.252470927204373,1.26203287766503,0.780877488593277,1.07711698866399,0.477937595905104,0.668396022247182,1.69845918473299,0.404810701674894,1.16902343164525,2.37172666767914,1.28528526568723,1.4194008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{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=entrezgene:75210
|HGNC=
|TSSclassifier=NA
|UniProt=uniprot:Q811B5
|association_with_transcript=-2bp_to_ENSMUST00000055454_5end
|cluster_id=chr17:36117183..36117198,-
|description=CAGE_peak_4_at_Prr3_5end
|id=chr17:36117183..36117198,-
|ontology_enrichment_celltype=CL:0000542!6.09e-07!13;CL:0000051!6.09e-07!13;CL:0000838!6.90e-07!12
|ontology_enrichment_celltype_v019_2=CL:0000542,1.64e-07,13;CL:0000051,1.64e-07,13;CL:0000838,1.89e-07,12;CL:0000738,3.64e-07,17;CL:0002087,3.64e-07,17;CL:0000791,4.99e-07,9;CL:0000789,4.99e-07,9;CL:0002420,4.99e-07,9;CL:0002419,4.99e-07,9;CL:0000790,4.99e-07,9;CL:0000084,9.66e-07,11;CL:0000827,9.66e-07,11
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=
|ontology_enrichment_uberon_v019_2=UBERON:0000926,2.02e-07,120;UBERON:0004120,2.02e-07,120;UBERON:0006603,2.02e-07,120;UBERON:0002370,5.61e-07,23;UBERON:0000974,5.61e-07,23;UBERON:0004807,5.61e-07,23;UBERON:0005058,5.61e-07,23;UBERON:0003351,5.61e-07,23;UBERON:0009113,5.61e-07,23;UBERON:0003295,5.61e-07,23;UBERON:0009722,5.61e-07,23;UBERON:0005562,5.61e-07,23;UBERON:0007690,5.61e-07,23;UBERON:0003408,6.17e-07,24
|phase1_expression=0.960893082628764,0,0,0.30246421130683,1.00179145989269,0.16787927191189,0.467225281191051,4.26106967357202,5.91312633037,3.27690336850791,1.88339765048055,1.59544317990673,4.62241970814255,4.10875891369288,1.66554880907831,0.404950534779652,0,2.05050407482854,1.91960207048034,0.84877930359606,0.510259740906419,1.68794617041505,1.04479915655574,0.47997726838022,0,0.57423196411502,0,0.215471232685889,0.190023419456374,0.252030129759931,0.221730510655305,0.635030673459631,1.23012957516914,0,0,0.166234645358492,0,2.92972141515835,3.1253413780952,0.523523743973798,3.52938892818609,0.683045484958446,2.42755176515577,1.1330713617802,1.52065396829272,1.10128051297009,2.34717403304412,0,0.439372365468944,1.1665793944457,0.419959264876088,0,4.36234775750115,7.97898356212479,8.06625117941913,0.257259436035947,0.573066879877513,1.54701627683233,2.02316460859598,3.1739458756322,2.53532561402472,1.35537812827653,0.889294796111139,0.899899717281399,2.96659908770092,1.4209602298922,1.79760066311043,1.53687322128622,0.311068836925433,0.675029691658453,0.420649922702764,1.99955689082663,2.42955395046775,1.10241719293459,0.670918297127655,0.919218786610021,2.20231761998777,0.383062014255563,1.0752457327937,2.37395317914349,1.55528994124096,1.04182674111352,0,0.56276261003168,0.763991238884051,3.83017161115768,1.28134512719193,2.60959224155421,0.530083353332288,0.453429360640713,1.15945795480671,0,0,0,0,0.448026887097336,0.561777680527007,0.511290967734173,1.03914401841148,0.70667914902068,1.54927761754349,0,0,7.11066703153331,0.216491041011214,0.253359865475099,0,0.79928715803342,1.55362730188303,1.48442139064825,1.38788261412909,1.82679286987285,1.38369298353635,1.65794904607885,3.52766121407114,0.502666365318702,1.23597483867187,0.578397427679647,1.76922110389975,1.45590164952668,1.10420759230197,0.484875253135222,0,1.17112318804619,0.83778682725382,0,1.67741174308288,2.99951365496704,1.52484272487678,1.04853447583376,1.37250180845588,4.77486538028885,0.869121600961382,1.02286182932132,1.0389402227978,0.973447578406546,2.03678727700633,1.24406970610093,0.505445516867349,0.210441855886474,1.69156575851515,1.14951052216736,0.360124259610698,1.50704817835715,1.56483948048054,2.0498195245576,1.49922759295566,2.32833033665114,0.431135985865684,1.51284864134255,2.81521798662318,1.97276159184817,0.278047249225598,0.696504333044333,1.64625709126355,2.7864797354589,2.1066395619397,1.02939162845886,1.70498099637356,0.621377317606506,0.703578179943289,0.540186184383045,0.473489471170421,1.18058539048442,0.925602677324269,0.697601834251224,0,1.28441876603886,0.329119699826961,0.492502392237286,0.972825714550269,0.292399974850665,0.878200461164203,0.268412837520744,0.420579897128254,2.98423375899925,0.330418782983798,0,1.49301775374664,1.85789337488351,0.515469845288373,0.201683524623343,0.22237804384487,0.760902504450237,1.42358718463353,0.494096864172033,0.251335208800269,1.1937388322469,1.16978452271472,1.79763881730844,0.216138049874694,0.796565093017469,1.51734320762465,1.02823661348756,0,1.01825663922657,1.35766741017338,1.68325967736765,1.3279672796094,0.885660887877613,0.31399745568275,0.987177311374404,0,0.333690211432188,0.196558995113203,0.224862112384854,0,0.482354319504834,0,0.575392274901621,0.486405680325106,0,0,1.48856379067401,0.936113019343682,0.757736633841335,0.358794827043824,1.4473305640901,1.29327233116623,0.947457058852424,1.14075483509418,1.01847051465113,0.938760993154008,0.335012514883631,0.476087281772027,0.585400943573396,1.7339865851681,1.10732344824387,0.478364305972461,2.13022309130459,1.20879487306127,0.433947175744535,1.50791283939272,0,0.491764273019036,1.37968373152366,0.963303539926752,1.17211686592203,0.655739781506702,0.252470927204373,1.26203287766503,0.780877488593277,1.07711698866399,0.477937595905104,0.668396022247182,1.69845918473299,0.404810701674894,1.16902343164525,2.37172666767914,1.28528526568723,1.41940085208269,2.49291845134157,2.60619134965722,1.15479086080775,1.32745138339963,1.45668381692989,0,0.943025398779491,0.590603785761546,0.614870295887855,1.03371317267288,0.727067458955011,0,0.316036757935816,1.05418608574999,1.03135543248187,2.38307724027652,1.44048875225048,2.8458910432206,2.35770738534752,1.06404140185364,1.42695054081656,1.97458824722545,4.26250928760439,1.40803024838226,2.75381692122966,1.10264199027481,1.48397627647332,1.29171541356724,0.784068024066026,1.07435109602823,0.984845398470368,0.874442509889552,1.29797711407357,1.02522528478712,0.82554747185289,2.40752885580625,0.753473828018764,0.820165366326151,1.37266903923914,1.69978429993855,1.6794174278839,2.3493995546752,1.90934123603023,2.05618395827738,1.21991680276109,0.756037385752609,1.04544148007234,0.436725127492355,0.944050424693745,0.991841468704031,1.30877970992015,0.90730481304255,1.24267862617385,1.69107881605257,1.49516546043979,1.82004339502807,2.72231663681667,1.29159823477731,2.19642963138012,2.11243029562357,1.3020438484395,1.99232754408851,2.17425708743405,1.44015003128933,1.896066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|short_description=p4@Prr3
}}

Revision as of 20:32, 4 August 2015

Short description:p4@Prr3
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_4_at_Prr3_5end
Coexpression cluster:NA
Association with transcript: -2bp_to_ENSMUST00000055454_5end
EntrezGene:75210
Link to Zenbu:ZENBU


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CAGE Expression

Sample

p4@Prr3

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.96
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.30
CD326+ enterocyte, pool2.CNhs13197.11849-124I41.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.17
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.47
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E94.26
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E75.91
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F23.28
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E61.88
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F11.60
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E44.62
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E84.11
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A11.67
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.40
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A22.05
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A41.92
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.85
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A30.51
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H21.69
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I91.04
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.48
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.57
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.22
Ileum epithelium, pool1.CNhs13199.10252-104B90.19
Ileum epithelium, pool2.CNhs13232.10253-104C10.25
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.22
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.64
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G61.23
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.17
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G82.93
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H13.13
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.52
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G93.53
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.68
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H42.43
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D81.13
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D91.52
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B31.10
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B72.35
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.00
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.44
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C31.17
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.42
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A24.36
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I97.98
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A18.07
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.26
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.57
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C51.55
Mouse Granule cells, donor1.CNhs12131.11713-123C32.02
Mouse Granule cells, donor2.CNhs12357.11731-123E33.17
Mouse Granule cells, donor3.CNhs12108.11636-122C72.54
Mouse Meningeal cells, donor1.CNhs12132.11716-123C61.36
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.89
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.90
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E72.97
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D21.42
Mouse Microglia, donor1.CNhs12629.11718-123C81.80
Mouse Microglia, donor2.CNhs12634.11736-123E81.54
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.31
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.68
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.42
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F12.00
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D52.43
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D21.10
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.67
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.92
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D32.20
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F30.38
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D71.08
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D42.37
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F41.56
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D81.04
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E40.00
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E50.56
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I60.76
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D63.83
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F61.28
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E12.61
Mouse Schwann, donor1.CNhs12507.11728-123D90.53
Mouse Schwann, donor2.CNhs12573.11746-123F90.45
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G31.16
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.45
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.56
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.51
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E31.04
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.71
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G61.55
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B67.11
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.22
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.25
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.80
accessory axillary lymph node, adult.CNhs10475.1063-29H91.55
adrenal gland, adult.CNhs10508.49-24D71.48
adrenal gland, embryo E14.CNhs11038.406-44C51.39
adrenal gland, embryo E16.CNhs11004.1254-43D61.83
adrenal gland, embryo E17.CNhs11043.1263-45I11.38
adrenal gland, embryo E18.CNhs11026.1262-18F51.66
adrenal gland, neonate N00.CNhs11191.1311-23C13.53
adrenal gland, neonate N25.CNhs11223.1377-27I30.50
amnion, adult pregnant day17.5.CNhs10488.583-22A81.24
aorta, adult.CNhs10498.46-23H10.58
bone (os femoris), adult.CNhs10483.56-12G21.77
bone (os femoris), neonate N02.CNhs11227.1985-43F51.46
bone (os femoris), neonate N16.CNhs11225.1525-43A61.10
bone (os femoris), neonate N20.CNhs11195.1350-25C30.48
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B21.17
cerebellum, neonate N30.CNhs11135.1395-42I20.84
colon, adult.CNhs10468.36-18H70.00
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C71.68
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D13.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D41.52
corpora quadrigemina, adult.CNhs10501.16-22A41.05
corpus striatum, adult.CNhs10487.19-21D81.37
corpus striatum, neonate N00.CNhs11226.630-43F14.77
cortex, adult.CNhs10473.12-14D50.87
cortex, neonate N30.CNhs11107.1392-42F21.02
diencephalon, adult.CNhs10482.20-12F21.04
diencephalon, neonate N30.CNhs11201.1388-42B20.97
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B12.04
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A21.24
epididymis, adult.CNhs10490.58-23B20.51
eyeball, adult.CNhs10484.31-12G40.21
eyeball, embryo E12.CNhs11016.345-16C61.69
eyeball, embryo E14.CNhs10521.399-16E21.15
eyeball, embryo E15.CNhs10593.426-16C90.36
eyeball, embryo E17.CNhs11023.1261-18D41.51
eyeball, neonate N00.CNhs11207.633-15C61.56
eyeball, neonate N01.CNhs11140.1532-43E72.05
eyeball, neonate N02.CNhs11205.1551-44G81.50
eyeball, neonate N16.CNhs11188.777-19A22.33
forelimb, embryo E11.CNhs10596.335-25E20.43
forelimb, embryo E12.CNhs10600.359-14H21.51
forelimb, embryo E13.CNhs10589.384-1E22.82
forelimb, embryo E14.CNhs10577.413-26A81.97
forelimb, embryo E15.CNhs11007.437-20E70.28
forelimb, embryo E17.CNhs10598.1517-43C40.70
forelimb, embryo E18.CNhs11008.1520-43B51.65
gonad, embryo E13.CNhs11044.1564-45I62.79
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C82.11
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D21.03
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D51.70
heart, embryo E11.CNhs10586.331-24E90.62
heart, embryo E12.CNhs11015.353-12F50.70
heart, embryo E13.CNhs11013.376-3I90.54
heart, embryo E14.CNhs10597.403-26D40.47
heart, embryo E15.CNhs11017.431-16C81.18
heart, embryo E16.CNhs11021.457-17C60.93
heart, embryo E17.CNhs11025.479-18E50.70
heart, embryo E18.CNhs11030.1283-20G30.00
heart, neonate N00.CNhs11213.639-21E31.28
heart, neonate N03.CNhs11221.1349-25I20.33
heart, neonate N10.CNhs11118.749-24G10.49
heart, neonate N16.CNhs11209.782-15G10.97
heart, neonate N20.CNhs11127.821-26I60.29
heart, neonate N25.CNhs11196.1351-25D30.88
heart, neonate N30.CNhs11202.1390-42D20.27
hippocampus, adult.CNhs10478.13-16E80.42
hippocampus, neonate N00.CNhs11228.627-43G12.98
intestinal mucosa, adult.CNhs10506.860-29I30.33
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I51.49
intestine, embryo E13.CNhs11010.381-16D51.86
intestine, embryo E15.CNhs10602.976-16D80.52
intestine, embryo E16.CNhs10585.463-22H40.20
intestine, embryo E17.CNhs10582.482-18D30.22
intestine, embryo E18.CNhs10526.1289-20F70.76
intestine, neonate N00.CNhs11126.644-26D11.42
intestine, neonate N01.CNhs11192.1322-23E90.49
intestine, neonate N06.CNhs11102.688-20B80.25
intestine, neonate N07.CNhs11095.720-20F21.19
intestine, neonate N10.CNhs11098.755-23A51.17
intestine, neonate N20.CNhs11187.827-18D11.80
intestine, neonate N25.CNhs11121.1352-25E30.22
intestine, neonate N30.CNhs11131.1384-42G10.80
kidney, embryo E14.CNhs10606.411-4I91.52
kidney, embryo E15.CNhs10997.434-16F81.03
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I21.02
kidney, embryo E18.CNhs11001.1288-20C71.36
kidney, neonate N00.CNhs11214.646-21G71.68
kidney, neonate N10.CNhs11206.758-6D51.33
kidney, neonate N20.CNhs11113.832-19I10.89
kidney, neonate N25.CNhs11122.1353-25F30.31
kidney, neonate N30.CNhs11203.1385-42H10.99
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.33
liver, embryo E13.CNhs10524.378-3H60.20
liver, embryo E14.CNhs10594.409-16E10.22
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.48
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.58
liver, neonate N00.CNhs11117.641-24F40.49
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H21.49
liver, neonate N10.CNhs11115.751-24B90.94
liver, neonate N20.CNhs11220.823-25A30.76
liver, neonate N25.CNhs11198.1368-26H10.36
liver, neonate N30.CNhs11106.1382-42D11.45
lung, adult.CNhs10474.28-22B11.29
lung, embryo E12.CNhs10522.354-16G20.95
lung, embryo E14.CNhs10604.404-26F81.14
lung, embryo E15.CNhs11020.432-17C51.02
lung, embryo E16.CNhs10998.458-17B60.94
lung, embryo E17.CNhs10605.480-44A60.34
lung, embryo E18.CNhs10583.1287-20I60.48
lung, neonate N00.CNhs11224.640-42C60.59
lung, neonate N06.CNhs11212.683-20E51.73
lung, neonate N07.CNhs11111.715-19A31.11
lung, neonate N10.CNhs11219.750-23E60.48
lung, neonate N20.CNhs11109.822-18A42.13
lung, neonate N25.CNhs11119.1359-25C71.21
lung, neonate N30.CNhs11133.1394-42H20.43
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A11.51
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.49
mammary gland, adult pregnant day19.CNhs10476.588-5H21.38
medulla oblongata, adult.CNhs10477.17-12C20.96
medulla oblongata, neonate N30.CNhs11200.1396-42A31.17
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.66
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.25
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E11.26
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.78
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E31.08
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.48
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.67
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D91.70
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.40
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D51.17
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D62.37
olfactory brain, adult.CNhs10489.18-22I91.29
ovary, adult.CNhs10507.91-2I71.42
ovary, embryo E18.CNhs11040.505-44H72.49
ovary, neonate N00.CNhs11217.1299-22I42.61
oviduct, adult pregnant day01.CNhs10500.988-6G61.15
pancreas, adult.CNhs10486.34-16E41.33
pancreas, embryo E14.CNhs11012.405-44F41.46
pancreas, embryo E15.CNhs11042.1556-45F20.00
pancreas, embryo E16.CNhs11003.460-26E50.94
pancreas, embryo E17.CNhs10599.1558-45G30.59
pancreas, embryo E18.CNhs10580.1535-43I70.61
pancreas, neonate N00.CNhs11105.645-26G91.03
pancreas, neonate N01.CNhs11138.1531-43D70.73
pancreas, neonate N02.CNhs11139.1539-43D80.00
pancreas, neonate N16.CNhs11136.787-43B60.32
pancreas, neonate N25.CNhs11094.1555-45E21.05
pancreas, neonate N30.CNhs11182.1548-44H51.03
pituitary gland, adult.CNhs10493.21-1G82.38
pituitary gland, embryo E12.CNhs11018.346-16E61.44
pituitary gland, embryo E13.CNhs11009.370-44C72.85
pituitary gland, embryo E14.CNhs11037.398-44A52.36
pituitary gland, embryo E15.CNhs10592.427-16B91.06
pituitary gland, embryo E16.CNhs11036.449-43F61.43
pituitary gland, embryo E17.CNhs11039.1265-44F51.97
pituitary gland, neonate N00.CNhs11190.1308-22E94.26
placenta, adult pregnant day10.CNhs10472.539-13I71.41
placenta, adult pregnant day17.CNhs10464.577-18G32.75
prostate, adult.CNhs10470.859-1F81.10
skin, adult.CNhs10492.30-1C31.48
skin, neonate N00.CNhs11124.650-25G41.29
skin, neonate N03.CNhs11215.662-22H30.78
skin, neonate N06.CNhs11097.693-20I51.07
skin, neonate N10.CNhs11108.762-6C40.98
small intestine, neonate N16.CNhs11114.790-21I10.87
spinal cord, adult.CNhs10505.24-13C91.30
spleen, adult.CNhs10465.25-2G21.03
spleen, embryo E16.CNhs11035.461-43C10.83
spleen, embryo E18.CNhs11011.1271-21F22.41
spleen, neonate N10.CNhs11116.752-24D10.75
spleen, neonate N20.CNhs11112.824-19H10.82
spleen, neonate N25.CNhs11099.1354-25G31.37
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C61.70
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C91.68
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D32.35
stomach, adult.CNhs10503.33-1H61.91
stomach, embryo E12.CNhs10588.356-43E32.06
stomach, embryo E15.CNhs10603.1252-16G81.22
stomach, embryo E16.CNhs11022.459-17D40.76
stomach, embryo E17.CNhs11006.1035-18D51.05
stomach, embryo E18.CNhs10999.1286-20C60.44
stomach, neonate N03.CNhs11193.1340-24B80.94
stomach, neonate N07.CNhs11210.718-18A90.99
stomach, neonate N25.CNhs11104.1355-25E41.31
stomach, neonate N30.CNhs11134.1386-42I10.91
submandibular gland, adult.CNhs10469.59-29C11.24
testis, adult.CNhs10504.57-7G51.69
testis, embryo E13.CNhs11031.389-23F51.50
testis, embryo E15.CNhs11034.443-27C51.82
testis, embryo E16.CNhs11033.470-26G52.72
testis, embryo E17.CNhs11029.486-18I51.29
testis, embryo E18.CNhs11027.503-18G52.20
testis, neonate N00.CNhs11189.1300-22B72.11
testis, neonate N07.CNhs11222.726-26I41.30
testis, neonate N10.CNhs11204.763-44D91.99
testis, neonate N20.CNhs11110.839-18H32.17
testis, neonate N30.CNhs11130.1391-42E21.44
thymus, adult.CNhs10471.38-12B51.90
thymus, embryo E14.CNhs11041.402-44I41.22
thymus, embryo E15.CNhs11005.430-45I22.47
thymus, embryo E16.CNhs11002.456-26C51.04
thymus, embryo E17.CNhs10581.478-18C11.25
thymus, embryo E18.CNhs10595.1273-19G41.99
thymus, neonate N02.CNhs11181.1541-43F81.92
thymus, neonate N03.CNhs11137.2104-43C71.62
thymus, neonate N06.CNhs11197.681-26C41.92
thymus, neonate N07.CNhs11211.713-19D31.68
thymus, neonate N10.CNhs11194.748-24E41.71
thymus, neonate N20.CNhs11186.820-7A22.05
thymus, neonate N25.CNhs11125.1362-25G71.44
thymus, neonate N30.CNhs11132.1393-42G22.10
tongue, adult.CNhs10499.32-1B40.45
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.44
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.72
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.34
urinary bladder, adult.CNhs10481.879-12E41.35
uterus, adult pregnant day19.CNhs10497.590-15F51.31
uterus, adult.CNhs10509.92-27E50.92
vagina, adult.CNhs10502.89-27D51.29
vesicular gland, adult.CNhs10491.51-27F81.50
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A11.13
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A20.00
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A30.57
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D70.52
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A40.00
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A51.51
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A60.68
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A70.90
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A80.45
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A90.00
whole body, embryo E11.CNhs11014.324-5I81.04
whole body, embryo E12.CNhs10587.857-27C90.40
whole body, embryo E13.CNhs10512.372-23H20.85
whole body, embryo E14.5.CNhs10578.420-27D21.22
whole body, embryo E14.CNhs10519.395-14B11.05
whole body, embryo E16.CNhs10514.453-14F21.10
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.89
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G51.44
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G51.28
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G51.01
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G51.52
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.38
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.94
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.77
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.80
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.95
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.93
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G51.54
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.74
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G50.69
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.71
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.72
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G50.73
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G51.04
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G51.27
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G51.10
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G51.05
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G51.36
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G51.12
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G51.54
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.39
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G52.01
whole body, embryo E17.5.CNhs10513.490-9F91.16
whole body, embryo E17.CNhs10517.475-3I52.50
whole body, embryo E18.CNhs10516.493-3B31.40
whole body, neonate N00.CNhs10525.657-19C23.22
whole body, neonate N01.CNhs10576.659-23C60.38
whole body, neonate N06.CNhs10515.692-21D11.76
whole body, neonate N10.CNhs10518.761-6B41.85





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
lymphocyte1.64e-0713
common lymphoid progenitor1.64e-0713
lymphoid lineage restricted progenitor cell1.89e-0712
leukocyte3.64e-0717
nongranular leukocyte3.64e-0717
mature alpha-beta T cell4.99e-079
alpha-beta T cell4.99e-079
immature T cell4.99e-079
mature T cell4.99e-079
immature alpha-beta T cell4.99e-079
T cell9.66e-0711
pro-T cell9.66e-0711

Uber anatomy
Ontology termp-valuen
mesoderm2.02e-07120
mesoderm-derived structure2.02e-07120
presumptive mesoderm2.02e-07120
thymus5.61e-0723
neck5.61e-0723
respiratory system epithelium5.61e-0723
hemolymphoid system gland5.61e-0723
pharyngeal epithelium5.61e-0723
thymic region5.61e-0723
pharyngeal gland5.61e-0723
entire pharyngeal arch endoderm5.61e-0723
thymus primordium5.61e-0723
early pharyngeal endoderm5.61e-0723
gland of gut6.17e-0724
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