FFCP PHASE1:Mm9::chr17:80113045..80113065,-: Difference between revisions
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{{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=3117|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr17:80113045..80113065,-|id=chr17:80113045..80113065,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0000222,9.02e-13,7;CL:0000680,1.65e-10,6;CL:0000187,1.65e-10,6;CL:0000056,1.65e-10,6;CL:0000192,5.27e-09,3;CL:0000359,5.27e-09,3;CL:0002539,5.27e-09,3;CL:0000514,5.27e-09,3;CL:0000355,7.39e-07,9|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=|ontology_enrichment_uberon_v019_2=UBERON:0000055,4.95e-13,5;UBERON:0007500,4.95e-13,5;UBERON:0001981,4.95e-13,5;UBERON:0002049,4.95e-13,5;UBERON:0007798,4.95e-13,5;UBERON:0004537,4.95e-13,5;UBERON:0006965,4.95e-13,5;UBERON:0000947,1.07e-10,4;UBERON:0001637,1.07e-10,4;UBERON:0004573,1.07e-10,4;UBERON:0003509,1.07e-10,4;UBERON:0004571,1.07e-10,4;UBERON:0010191,1.07e-10,4;UBERON:0004572,1.07e-10,4;UBERON:0001135,5.27e-09,3;UBERON:0004237,5.27e-09,3;UBERON:0004695,5.27e-09,3;UBERON:0002111,5.27e-09,3;UBERON:0004178,5.27e-09,3;UBERON:0007524,9.23e-08,11;UBERON:0003077,9.23e-08,11;UBERON:0007285,9.23e-08,11;UBERON:0001134,7.39e-07,9;UBERON:0002036,7.39e-07,9;UBERON:0002385,7.39e-07,9;UBERON:0000486,7.39e-07,9;UBERON:0007503,7.39e-07,9;UBERON:0001015,7.39e-07,9;UBERON:0002329,7.39e-07,9;UBERON:0003082,7.39e-07,9;UBERON:0003059,7.39e-07,9;UBERON:0007282,7.39e-07,9;UBERON:0004290,7.39e-07,9;UBERON:0009618,7.39e-07,9|phase1_expression=2.24208385946712,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0.0992909512008853,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.68688044031483,7.50189291024408,7.15832333430558,1.56478268869608,2.8343270329458,0.878744730937887,0.58328969722285,0.979904951377538,1.43752564364972,0,0,0,1.80081605225163,0.286533439938757,1.03134418455488,0,0,0,1.0165335962074,0,0.899899717281399,1.97773272513395,0,0.898800331555214,1.53687322128622,0,0.135005938331691,0.210324961351382,0,0,0,0,0,0,0,0.153606533256243,0.527545150920775,0.182975287204819,0.52091337055676,0.279182999001381,0,0.61119299110724,0.589257170947335,0.427115042397309,0.186399445825301,0.075726193333184,0.302286240427142,3.18850937571846,0,0,0,0,0,0.140444420131752,4.26075806445144,2.85764605063156,3.88673531961374,0,5.13305909657271,2.54805239706646,0,1.73192832808971,0.760079596425296,0.505524445014783,0.11418387971906,2.33044095282455,0.445326417194474,0.346970653532272,0.304465478312141,0.691846491768175,0.301445281105245,0.352766121407114,0,0,1.15679485535929,0.884610551949874,0,0.220841518460394,0,0,0.585561594023094,0,0.510914110417183,0,0,0,0.149790639404823,0,0,0,0.255715457330331,0.20778804455956,0,1.42575109390443,0.746441823660558,0,0.841767423545896,1.56144531555244,0.689706313300419,0.360124259610698,0.60281927134286,1.49680298132921,0.640568601424249,1.3118241438362,0.258703370739016,0,0.189106080167819,0.175951124163949,0,0,0,0,0.59710280045548,0,0,0,0,0.469052119962192,0.36012412292203,0.23674473558521,0,0,0,0.268273401399619,0,0.329119699826961,0.164167464079095,0.324275238183423,0,0.658650345873152,0.402619256281115,0,0.617427674275707,0,0,0,0.464473343720877,0.128867461322093,0,0.444756087689741,0.190225626112559,0,0,0,0.198956472041151,0.19496408711912,0.898819408654221,0.216138049874694,0.199141273254367,0.379335801906163,0.114248512609729,1.1270773567308,0.814605311381257,0.387904974335251,1.1221731182451,0.569128834118316,0.738050739898011,0.784993639206874,0.740382983530803,0,0,0,0,0,0,0,0,0,0,1.43768206527355,0,0,0,0,0,0,0.189491411770485,0.162964976442026,0.169745085775188,0,0.167506257441816,0,0.195133647857799,0,0,0.318909537314974,0,0,0,0,0,0.491764273019036,0,0.481651769963376,0,1.96721934452011,0,2.83957397474631,0.780877488593277,0.861693590931196,0,0,0.283076530788832,1.21443210502468,1.46127928955656,0,0.963963949265421,1.13552068166615,0.534196811001766,0.651547837414304,0.494910368917606,0,0,0,0.188605079755898,0,0,0.258428293168221,0,0,0.316036757935816,0,0,0.340439605753788,0.900305470156551,0.129358683782755,0.428674070063185,0.886701168211368,0.178368817602071,0.164549020602121,0.304464949114599,0,0,0.441056796109924,0.65954501176592,0.322928853391811,0.361877549568935,0.238744688006273,0.492422699235184,0,0.370850604021019,0.170870880797853,0,0,0,0.136694227721025,0.457556346413045,0,0,0,0,0.158167996790568,0,0.216010681643603,0,0,0.269728692769641,0.0826534557253359,0.26175594198403,0,0,0.56369293868419,0.448549638131936,1.15820943319968,0.583353565032143,1.16243841129958,1.18269287843545,1.29092962510329,0.13020438484395,0,0.241584120826006,0.288030006257865,0.632022241256357,0.405450430580328,0.308132871494482,0,0.358053391334963,0.39736270956253,0.120195449519969,0.147689527174577,0,0.0762068066549998,0,0,0,0.116876902181569,0,0,0,0,1.9318959403219,0.375364950902364,0,0.214368379079066,1.00314420807073,0,0,0,0.171853182343688,0.685082519770642,0,0,0,0,0,0,0.399024873401031,0.341467211508268,0,0,0.183843508450014,0,0,0,0.505394423527595,0.25347929989024,0.3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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=3117 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr17:80113045..80113065,- | |||
|description=CAGE_peak_at_chr17:80113045..80113065,- | |||
|id=chr17:80113045..80113065,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0000222,9.02e-13,7;CL:0000680,1.65e-10,6;CL:0000187,1.65e-10,6;CL:0000056,1.65e-10,6;CL:0000192,5.27e-09,3;CL:0000359,5.27e-09,3;CL:0002539,5.27e-09,3;CL:0000514,5.27e-09,3;CL:0000355,7.39e-07,9 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000055,4.95e-13,5;UBERON:0007500,4.95e-13,5;UBERON:0001981,4.95e-13,5;UBERON:0002049,4.95e-13,5;UBERON:0007798,4.95e-13,5;UBERON:0004537,4.95e-13,5;UBERON:0006965,4.95e-13,5;UBERON:0000947,1.07e-10,4;UBERON:0001637,1.07e-10,4;UBERON:0004573,1.07e-10,4;UBERON:0003509,1.07e-10,4;UBERON:0004571,1.07e-10,4;UBERON:0010191,1.07e-10,4;UBERON:0004572,1.07e-10,4;UBERON:0001135,5.27e-09,3;UBERON:0004237,5.27e-09,3;UBERON:0004695,5.27e-09,3;UBERON:0002111,5.27e-09,3;UBERON:0004178,5.27e-09,3;UBERON:0007524,9.23e-08,11;UBERON:0003077,9.23e-08,11;UBERON:0007285,9.23e-08,11;UBERON:0001134,7.39e-07,9;UBERON:0002036,7.39e-07,9;UBERON:0002385,7.39e-07,9;UBERON:0000486,7.39e-07,9;UBERON:0007503,7.39e-07,9;UBERON:0001015,7.39e-07,9;UBERON:0002329,7.39e-07,9;UBERON:0003082,7.39e-07,9;UBERON:0003059,7.39e-07,9;UBERON:0007282,7.39e-07,9;UBERON:0004290,7.39e-07,9;UBERON:0009618,7.39e-07,9 | |||
|phase1_expression=2.24208385946712,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0.0992909512008853,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.68688044031483,7.50189291024408,7.15832333430558,1.56478268869608,2.8343270329458,0.878744730937887,0.58328969722285,0.979904951377538,1.43752564364972,0,0,0,1.80081605225163,0.286533439938757,1.03134418455488,0,0,0,1.0165335962074,0,0.899899717281399,1.97773272513395,0,0.898800331555214,1.53687322128622,0,0.135005938331691,0.210324961351382,0,0,0,0,0,0,0,0.153606533256243,0.527545150920775,0.182975287204819,0.52091337055676,0.279182999001381,0,0.61119299110724,0.589257170947335,0.427115042397309,0.186399445825301,0.075726193333184,0.302286240427142,3.18850937571846,0,0,0,0,0,0.140444420131752,4.26075806445144,2.85764605063156,3.88673531961374,0,5.13305909657271,2.54805239706646,0,1.73192832808971,0.760079596425296,0.505524445014783,0.11418387971906,2.33044095282455,0.445326417194474,0.346970653532272,0.304465478312141,0.691846491768175,0.301445281105245,0.352766121407114,0,0,1.15679485535929,0.884610551949874,0,0.220841518460394,0,0,0.585561594023094,0,0.510914110417183,0,0,0,0.149790639404823,0,0,0,0.255715457330331,0.20778804455956,0,1.42575109390443,0.746441823660558,0,0.841767423545896,1.56144531555244,0.689706313300419,0.360124259610698,0.60281927134286,1.49680298132921,0.640568601424249,1.3118241438362,0.258703370739016,0,0.189106080167819,0.175951124163949,0,0,0,0,0.59710280045548,0,0,0,0,0.469052119962192,0.36012412292203,0.23674473558521,0,0,0,0.268273401399619,0,0.329119699826961,0.164167464079095,0.324275238183423,0,0.658650345873152,0.402619256281115,0,0.617427674275707,0,0,0,0.464473343720877,0.128867461322093,0,0.444756087689741,0.190225626112559,0,0,0,0.198956472041151,0.19496408711912,0.898819408654221,0.216138049874694,0.199141273254367,0.379335801906163,0.114248512609729,1.1270773567308,0.814605311381257,0.387904974335251,1.1221731182451,0.569128834118316,0.738050739898011,0.784993639206874,0.740382983530803,0,0,0,0,0,0,0,0,0,0,1.43768206527355,0,0,0,0,0,0,0.189491411770485,0.162964976442026,0.169745085775188,0,0.167506257441816,0,0.195133647857799,0,0,0.318909537314974,0,0,0,0,0,0.491764273019036,0,0.481651769963376,0,1.96721934452011,0,2.83957397474631,0.780877488593277,0.861693590931196,0,0,0.283076530788832,1.21443210502468,1.46127928955656,0,0.963963949265421,1.13552068166615,0.534196811001766,0.651547837414304,0.494910368917606,0,0,0,0.188605079755898,0,0,0.258428293168221,0,0,0.316036757935816,0,0,0.340439605753788,0.900305470156551,0.129358683782755,0.428674070063185,0.886701168211368,0.178368817602071,0.164549020602121,0.304464949114599,0,0,0.441056796109924,0.65954501176592,0.322928853391811,0.361877549568935,0.238744688006273,0.492422699235184,0,0.370850604021019,0.170870880797853,0,0,0,0.136694227721025,0.457556346413045,0,0,0,0,0.158167996790568,0,0.216010681643603,0,0,0.269728692769641,0.0826534557253359,0.26175594198403,0,0,0.56369293868419,0.448549638131936,1.15820943319968,0.583353565032143,1.16243841129958,1.18269287843545,1.29092962510329,0.13020438484395,0,0.241584120826006,0.288030006257865,0.632022241256357,0.405450430580328,0.308132871494482,0,0.358053391334963,0.39736270956253,0.120195449519969,0.147689527174577,0,0.0762068066549998,0,0,0,0.116876902181569,0,0,0,0,1.9318959403219,0.375364950902364,0,0.214368379079066,1.00314420807073,0,0,0,0.171853182343688,0.685082519770642,0,0,0,0,0,0,0.399024873401031,0.341467211508268,0,0,0.183843508450014,0,0,0,0.505394423527595,0.25347929989024,0.377252682772152,0,0.128050304809739,0,0,0,0,0,0.441596760403192,0,0.177475806159338,0.476872379894642,0,0,0,0.365855945745545,0,0,0,0.118635018124174,0.394017929502254,0.409231043169689,0,0,0.749431733813838,0,0,0,0.220591419119515,0 | |||
|short_description=p@chr17:80113045..80113065,- | |||
}} |
Latest revision as of 08:59, 5 August 2015
Short description: | p@chr17:80113045..80113065, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr17:80113045..80113065, - |
Coexpression cluster: | MCL_coexpression_mm9:3117 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesodermal cell | 9.02e-13 | 7 |
muscle precursor cell | 1.65e-10 | 6 |
muscle cell | 1.65e-10 | 6 |
myoblast | 1.65e-10 | 6 |
smooth muscle cell | 5.27e-09 | 3 |
vascular associated smooth muscle cell | 5.27e-09 | 3 |
aortic smooth muscle cell | 5.27e-09 | 3 |
smooth muscle myoblast | 5.27e-09 | 3 |
multi-potent skeletal muscle stem cell | 7.39e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
vessel | 4.95e-13 | 5 |
epithelial tube open at both ends | 4.95e-13 | 5 |
blood vessel | 4.95e-13 | 5 |
vasculature | 4.95e-13 | 5 |
vascular system | 4.95e-13 | 5 |
blood vasculature | 4.95e-13 | 5 |
vascular cord | 4.95e-13 | 5 |
aorta | 1.07e-10 | 4 |
artery | 1.07e-10 | 4 |
systemic artery | 1.07e-10 | 4 |
arterial blood vessel | 1.07e-10 | 4 |
systemic arterial system | 1.07e-10 | 4 |
aortic system | 1.07e-10 | 4 |
arterial system | 1.07e-10 | 4 |
smooth muscle tissue | 5.27e-09 | 3 |
blood vessel smooth muscle | 5.27e-09 | 3 |
arterial system smooth muscle | 5.27e-09 | 3 |
artery smooth muscle tissue | 5.27e-09 | 3 |
aorta smooth muscle tissue | 5.27e-09 | 3 |
dense mesenchyme tissue | 9.23e-08 | 11 |
paraxial mesoderm | 9.23e-08 | 11 |
presumptive paraxial mesoderm | 9.23e-08 | 11 |
skeletal muscle tissue | 7.39e-07 | 9 |
striated muscle tissue | 7.39e-07 | 9 |
muscle tissue | 7.39e-07 | 9 |
multilaminar epithelium | 7.39e-07 | 9 |
epithelial vesicle | 7.39e-07 | 9 |
musculature | 7.39e-07 | 9 |
somite | 7.39e-07 | 9 |
myotome | 7.39e-07 | 9 |
presomitic mesoderm | 7.39e-07 | 9 |
presumptive segmental plate | 7.39e-07 | 9 |
dermomyotome | 7.39e-07 | 9 |
trunk paraxial mesoderm | 7.39e-07 | 9 |