FFCP PHASE1:Mm9::chr19:4214367..4214375,+: Difference between revisions
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{{FFCP|EntrezGene=56708|HGNC=|MCL_coexpression_id=1728|UniProt=Q9QZM3,Q3TM06|association_with_transcript=-16bp_to_NM_019952,uc008fzj.1,uc008fzk.1,uc008fzl.1_5end|description=CAGE_peak_5_at_Clcf1_5end|id=chr19:4214367..4214375,+|ontology_enrichment_celltype=CL:0000791!1.73e-10!9;CL:0000789!1.73e-10!9;CL:0002420!1.73e-10!9;CL:0002419!1.73e-10!9;CL:0000790!1.73e-10!9;CL:0000838!2.65e-10!12;CL:0000624!1.95e-09!8;CL:0000084!2.50e-09!11;CL:0000827!2.50e-09!11;CL:0000542!3.21e-09!13;CL:0000051!3.21e-09!13;CL:0000219!3.07e-08!54;CL:0000893!1.25e-07!6;CL:0002489!1.25e-07!6;CL:0000898!1.25e-07!6;CL:0000809!1.25e-07!6;CL:0000810!1.25e-07!6;CL:0000895!1.25e-07!6;CL:0000808!1.25e-07!6;CL:0000894!1.25e-07!6;CL:0000806!1.25e-07!6;CL:0000807!1.25e-07!6;CL:0000805!1.25e-07!6;CL:0002425!1.25e-07!6;CL:0002436!1.25e-07!6;CL:0002427!1.25e-07!6;CL:0002428!1.25e-07!6;CL:0002429!1.25e-07!6;CL:0002433!1.25e-07!6;CL:0002431!1.25e-07!6;CL:0002432!1.25e-07!6|ontology_enrichment_celltype_v019_2=CL:0000838,1.34e-18,12;CL:0000791,1.11e-17,9;CL:0000789,1.11e-17,9;CL:0002420,1.11e-17,9;CL:0002419,1.11e-17,9;CL:0000790,1.11e-17,9;CL:0000893,2.52e-17,6;CL:0002489,2.52e-17,6;CL:0000898,2.52e-17,6;CL:0000809,2.52e-17,6;CL:0000810,2.52e-17,6;CL:0000895,2.52e-17,6;CL:0000808,2.52e-17,6;CL:0000894,2.52e-17,6;CL:0000806,2.52e-17,6;CL:0000807,2.52e-17,6;CL:0000805,2.52e-17,6;CL:0002425,2.52e-17,6;CL:0002436,2.52e-17,6;CL:0002427,2.52e-17,6;CL:0002428,2.52e-17,6;CL:0002429,2.52e-17,6;CL:0002433,2.52e-17,6;CL:0002431,2.52e-17,6;CL:0002432,2.52e-17,6;CL:0000542,3.75e-17,13;CL:0000051,3.75e-17,13;CL:0000219,1.15e-15,54;CL:0000084,1.80e-14,11;CL:0000827,1.80e-14,11;CL:0000217,2.90e-14,2;CL:0000328,2.90e-14,2;CL:0002573,2.90e-14,2;CL:0002376,2.90e-14,2;CL:0000218,2.90e-14,2;CL:0000692,2.90e-14,2;CL:0002377,2.90e-14,2;CL:0002375,2.90e-14,2;CL:0000624,4.56e-13,8;CL:0000738,4.68e-13,17;CL:0002087,4.68e-13,17;CL:0002031,7.12e-12,25;CL:0002320,3.83e-10,46;CL:0000134,3.83e-10,46;CL:0000215,8.19e-10,3;CL:0000068,3.51e-09,3;CL:0002202,3.51e-09,3;CL:0000069,3.51e-09,3;CL:0002632,3.51e-09,3;CL:0002368,3.51e-09,3;CL:0000307,3.51e-09,3;CL:0000377,3.51e-09,3;CL:0000988,3.73e-09,32;CL:0002032,3.73e-09,32;CL:0000037,3.73e-09,32;CL:0000837,3.73e-09,32;CL:0000625,1.33e-07,1;CL:0000945,3.16e-07,1;CL:0000236,3.16e-07,1;CL:0000826,3.16e-07,1|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=|ontology_enrichment_uberon_v019_2=UBERON:0002384,3.83e-10,46;UBERON:0003126,3.51e-09,3;UBERON:0001005,3.51e-09,3;UBERON:0007196,3.51e-09,3;UBERON:0001558,3.51e-09,3;UBERON:0000072,3.96e-08,27|phase1_expression=0,0,0,0,0,0,0,0.645616617207881,3.66050677594334,3.97909694747389,0.68487187290202,0.717949430958028,1.02720437958723,1.31130603628496,0,0,0,0.473193248037357,0.959801035240171,1.69755860719212,0,0.0992909512008853,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202753862439029,0.367093504323363,0,0,1.5378032791413,0.777719596297134,0.139986421625363,0,1.00669563634642,0.725362142011344,1.34437519656986,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.2251073399897,2.34271836331035,0.579728977403356,0,0.679971333707751,0,0,0,0,0.511290967734173,1.03914401841148,1.06001872353102,0,0,0,0,0.432982082022428,1.52015919285059,1.01104889002957,0.11418387971906,0.258937883647172,0,0.173485326766136,0,0,0,0,0,0,0,0,0,0.441683036920787,0,0,0,0,0,0.718890747035522,0.599902730993408,0.254140454146129,0,0,0,0,0,0,0,0.101839363850316,0,0,0,0,0,0,0,0,0,0,0,0,0.189106080167819,0.175951124163949,0,0.278047249225598,0,0.205782136407943,0.59710280045548,0,0,0,0,0,0.180062061461015,0,0,0,0,0,0,0,0,0,0,0.219550115291051,0,0,0,0,0,0,0.464473343720877,0.128867461322093,0.201683524623343,0,0,0,0.329397909448022,0.251335208800269,0,0.19496408711912,0,0.216138049874694,0,0,0,0,0,0.193952487167626,0.0701358198903186,0,0,0,0.246794327843601,0,0,0,0,0,0,0,0.287696137450811,0,0,0,0,0,0,0,0,0.739012760666419,0,0,0.169745085775188,0.234690248288502,0,0.238043640886014,0,0.157635144106191,0,0,0,0.172684981865896,0.433947175744535,0,0,0,0,0,0,0.327869890753351,0,0,0,0,0,0,0,0,0,0,0,0,0,0.488660878060728,0.164970122972535,0,0,0,0.377210159511796,0,0.307435147943927,0.258428293168221,0.363533729477506,0,0,0,0,0,0,0.129358683782755,0,0.177340233642274,0,0,0,0,0,0,0,0,0,0,0,0,0.18542530201051,0,0,0.185194527369712,0,0.27338845544205,0.457556346413045,0.679913719975421,0.69975726161829,0.414599921413271,0,0,0.406638934253697,0.324016022465404,0,0.218362563746178,0.134864346384821,0.0826534557253359,0,0,0,0,0.149516546043979,0,0.583353565032143,0,0,0.117357238645754,0,0,0,0,0,0,0,0,0,0,0.120195449519969,0,0,0,0.100826185136841,0.194915761479505,0.0962118416403295,0,0,0,0,0,0,0.563047426353546,0,0,0,0,0,0,0,0,0,0,0.45032120322422,0.453142408984205,0,0,0,0,0.243106717068294,0,0,0,0.206035057238894,0,0,0,0.188626341386076,0.0936415074698824,0.0640251524048693,0.114870937911227,0,0,0,0,0,0,0,0,0,0,0.0846146078916765,0.182927972872773,0,0,0,0.118635018124174,0.0985044823755635,0,0,0,0.249810577937946,0,0,0.191288332068843,0,0|short_description=p5@Clcf1}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:56708 | |||
|HGNC= | |||
|MCL_coexpression_id=1728 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:Q9QZM3,uniprot:Q3TM06 | |||
|association_with_transcript=-16bp_to_NM_019952,uc008fzj.1,uc008fzk.1,uc008fzl.1_5end | |||
|cluster_id=chr19:4214367..4214375,+ | |||
|description=CAGE_peak_5_at_Clcf1_5end | |||
|id=chr19:4214367..4214375,+ | |||
|ontology_enrichment_celltype=CL:0000791!1.73e-10!9;CL:0000789!1.73e-10!9;CL:0002420!1.73e-10!9;CL:0002419!1.73e-10!9;CL:0000790!1.73e-10!9;CL:0000838!2.65e-10!12;CL:0000624!1.95e-09!8;CL:0000084!2.50e-09!11;CL:0000827!2.50e-09!11;CL:0000542!3.21e-09!13;CL:0000051!3.21e-09!13;CL:0000219!3.07e-08!54;CL:0000893!1.25e-07!6;CL:0002489!1.25e-07!6;CL:0000898!1.25e-07!6;CL:0000809!1.25e-07!6;CL:0000810!1.25e-07!6;CL:0000895!1.25e-07!6;CL:0000808!1.25e-07!6;CL:0000894!1.25e-07!6;CL:0000806!1.25e-07!6;CL:0000807!1.25e-07!6;CL:0000805!1.25e-07!6;CL:0002425!1.25e-07!6;CL:0002436!1.25e-07!6;CL:0002427!1.25e-07!6;CL:0002428!1.25e-07!6;CL:0002429!1.25e-07!6;CL:0002433!1.25e-07!6;CL:0002431!1.25e-07!6;CL:0002432!1.25e-07!6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000838,1.34e-18,12;CL:0000791,1.11e-17,9;CL:0000789,1.11e-17,9;CL:0002420,1.11e-17,9;CL:0002419,1.11e-17,9;CL:0000790,1.11e-17,9;CL:0000893,2.52e-17,6;CL:0002489,2.52e-17,6;CL:0000898,2.52e-17,6;CL:0000809,2.52e-17,6;CL:0000810,2.52e-17,6;CL:0000895,2.52e-17,6;CL:0000808,2.52e-17,6;CL:0000894,2.52e-17,6;CL:0000806,2.52e-17,6;CL:0000807,2.52e-17,6;CL:0000805,2.52e-17,6;CL:0002425,2.52e-17,6;CL:0002436,2.52e-17,6;CL:0002427,2.52e-17,6;CL:0002428,2.52e-17,6;CL:0002429,2.52e-17,6;CL:0002433,2.52e-17,6;CL:0002431,2.52e-17,6;CL:0002432,2.52e-17,6;CL:0000542,3.75e-17,13;CL:0000051,3.75e-17,13;CL:0000219,1.15e-15,54;CL:0000084,1.80e-14,11;CL:0000827,1.80e-14,11;CL:0000217,2.90e-14,2;CL:0000328,2.90e-14,2;CL:0002573,2.90e-14,2;CL:0002376,2.90e-14,2;CL:0000218,2.90e-14,2;CL:0000692,2.90e-14,2;CL:0002377,2.90e-14,2;CL:0002375,2.90e-14,2;CL:0000624,4.56e-13,8;CL:0000738,4.68e-13,17;CL:0002087,4.68e-13,17;CL:0002031,7.12e-12,25;CL:0002320,3.83e-10,46;CL:0000134,3.83e-10,46;CL:0000215,8.19e-10,3;CL:0000068,3.51e-09,3;CL:0002202,3.51e-09,3;CL:0000069,3.51e-09,3;CL:0002632,3.51e-09,3;CL:0002368,3.51e-09,3;CL:0000307,3.51e-09,3;CL:0000377,3.51e-09,3;CL:0000988,3.73e-09,32;CL:0002032,3.73e-09,32;CL:0000037,3.73e-09,32;CL:0000837,3.73e-09,32;CL:0000625,1.33e-07,1;CL:0000945,3.16e-07,1;CL:0000236,3.16e-07,1;CL:0000826,3.16e-07,1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002384,3.83e-10,46;UBERON:0003126,3.51e-09,3;UBERON:0001005,3.51e-09,3;UBERON:0007196,3.51e-09,3;UBERON:0001558,3.51e-09,3;UBERON:0000072,3.96e-08,27 | |||
|phase1_expression=0,0,0,0,0,0,0,0.645616617207881,3.66050677594334,3.97909694747389,0.68487187290202,0.717949430958028,1.02720437958723,1.31130603628496,0,0,0,0.473193248037357,0.959801035240171,1.69755860719212,0,0.0992909512008853,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202753862439029,0.367093504323363,0,0,1.5378032791413,0.777719596297134,0.139986421625363,0,1.00669563634642,0.725362142011344,1.34437519656986,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.2251073399897,2.34271836331035,0.579728977403356,0,0.679971333707751,0,0,0,0,0.511290967734173,1.03914401841148,1.06001872353102,0,0,0,0,0.432982082022428,1.52015919285059,1.01104889002957,0.11418387971906,0.258937883647172,0,0.173485326766136,0,0,0,0,0,0,0,0,0,0.441683036920787,0,0,0,0,0,0.718890747035522,0.599902730993408,0.254140454146129,0,0,0,0,0,0,0,0.101839363850316,0,0,0,0,0,0,0,0,0,0,0,0,0.189106080167819,0.175951124163949,0,0.278047249225598,0,0.205782136407943,0.59710280045548,0,0,0,0,0,0.180062061461015,0,0,0,0,0,0,0,0,0,0,0.219550115291051,0,0,0,0,0,0,0.464473343720877,0.128867461322093,0.201683524623343,0,0,0,0.329397909448022,0.251335208800269,0,0.19496408711912,0,0.216138049874694,0,0,0,0,0,0.193952487167626,0.0701358198903186,0,0,0,0.246794327843601,0,0,0,0,0,0,0,0.287696137450811,0,0,0,0,0,0,0,0,0.739012760666419,0,0,0.169745085775188,0.234690248288502,0,0.238043640886014,0,0.157635144106191,0,0,0,0.172684981865896,0.433947175744535,0,0,0,0,0,0,0.327869890753351,0,0,0,0,0,0,0,0,0,0,0,0,0,0.488660878060728,0.164970122972535,0,0,0,0.377210159511796,0,0.307435147943927,0.258428293168221,0.363533729477506,0,0,0,0,0,0,0.129358683782755,0,0.177340233642274,0,0,0,0,0,0,0,0,0,0,0,0,0.18542530201051,0,0,0.185194527369712,0,0.27338845544205,0.457556346413045,0.679913719975421,0.69975726161829,0.414599921413271,0,0,0.406638934253697,0.324016022465404,0,0.218362563746178,0.134864346384821,0.0826534557253359,0,0,0,0,0.149516546043979,0,0.583353565032143,0,0,0.117357238645754,0,0,0,0,0,0,0,0,0,0,0.120195449519969,0,0,0,0.100826185136841,0.194915761479505,0.0962118416403295,0,0,0,0,0,0,0.563047426353546,0,0,0,0,0,0,0,0,0,0,0.45032120322422,0.453142408984205,0,0,0,0,0.243106717068294,0,0,0,0.206035057238894,0,0,0,0.188626341386076,0.0936415074698824,0.0640251524048693,0.114870937911227,0,0,0,0,0,0,0,0,0,0,0.0846146078916765,0.182927972872773,0,0,0,0.118635018124174,0.0985044823755635,0,0,0,0.249810577937946,0,0,0.191288332068843,0,0 | |||
|short_description=p5@Clcf1 | |||
}} |
Revision as of 02:58, 4 August 2015
Short description: | p5@Clcf1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_5_at_Clcf1_5end |
Coexpression cluster: | MCL_coexpression_mm9:1728 |
Association with transcript: | -16bp_to_NM_019952, uc008fzj.1, uc008fzk.1, uc008fzl.1_5end |
EntrezGene: | 56708 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
connective tissue | 3.83e-10 | 46 |
trachea | 3.51e-09 | 3 |
respiratory airway | 3.51e-09 | 3 |
tracheobronchial tree | 3.51e-09 | 3 |
lower respiratory tract | 3.51e-09 | 3 |
segment of respiratory tract | 3.96e-08 | 27 |