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FFCP PHASE1:Mm9::chr2:79095500..79095556,+: Difference between revisions

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{{FFCP|EntrezGene=16401|HGNC=|MCL_coexpression_id=33|UniProt=E9QK91,Q00651,Q792F9,Q8BQ25|association_with_transcript=-26bp_to_ENSMUST00000028395,ENSMUST00000155105,NM_010576,uc008kgo.1,uc008kgp.1,uc008kgq.1,uc008kgr.1_5end|description=CAGE_peak_3_at_Itga4_5end|id=chr2:79095500..79095556,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0002031,6.12e-07,25|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002390!7.24e-09!45;UBERON:0003061!7.24e-09!45;UBERON:0004177!9.91e-09!29;UBERON:0002193!1.25e-08!48;UBERON:0002370!1.17e-07!23;UBERON:0000974!1.17e-07!23;UBERON:0004807!1.17e-07!23;UBERON:0005058!1.17e-07!23;UBERON:0003351!1.17e-07!23;UBERON:0009113!1.17e-07!23;UBERON:0003295!1.17e-07!23;UBERON:0009722!1.17e-07!23;UBERON:0005562!1.17e-07!23;UBERON:0007690!1.17e-07!23;UBERON:0006562!8.40e-07!24;UBERON:0003408!8.40e-07!24;UBERON:0001557!8.40e-07!24;UBERON:0001042!8.40e-07!24;UBERON:0008814!8.40e-07!24;UBERON:0009145!8.40e-07!24|ontology_enrichment_uberon_v019_2=UBERON:0002390,7.45e-12,45;UBERON:0003061,7.45e-12,45;UBERON:0004177,1.18e-11,29;UBERON:0005057,1.18e-11,29;UBERON:0002193,2.21e-11,48;UBERON:0002405,2.21e-11,48;UBERON:0002370,5.99e-10,23;UBERON:0000974,5.99e-10,23;UBERON:0004807,5.99e-10,23;UBERON:0005058,5.99e-10,23;UBERON:0003351,5.99e-10,23;UBERON:0009113,5.99e-10,23;UBERON:0003295,5.99e-10,23;UBERON:0009722,5.99e-10,23;UBERON:0005562,5.99e-10,23;UBERON:0007690,5.99e-10,23;UBERON:0006562,3.42e-09,24;UBERON:0003408,3.42e-09,24;UBERON:0001557,3.42e-09,24;UBERON:0001042,3.42e-09,24;UBERON:0008814,3.42e-09,24;UBERON:0009145,3.42e-09,24;UBERON:0000065,1.01e-08,41;UBERON:0001004,2.94e-08,42;UBERON:0000077,5.89e-08,35;UBERON:0000072,2.65e-07,27;UBERON:0000153,2.97e-07,43|phase1_expression=0.160148847104794,0,0,0,0,0,0,26.3411579820816,3.51971805379167,2.34064526321993,0.513653904676515,0.319088635981346,28.7617226284426,29.1984144079451,2.33176833270964,4.04950534779652,4.89693314689703,15.2999150198745,15.6310454310542,9.76096199135469,1.10556277196391,0.794327609607082,2.08959831311148,0.799962113967033,0,0,0,0,0.190023419456374,0,0.221730510655305,0.635030673459631,1.23012957516914,0,0,0,0,1.67412652294763,0.7813353445238,0.523523743973798,0.588231488031014,2.04913645487534,0.971020706062307,0,0,0,0,0,0,0,0,0,11.5769998179838,14.5072428402269,13.1076581665561,0.257259436035947,0,0,0.404632921719196,0,1.26766280701236,0,0,0.449949858640699,0,0,0,0,0.622137673850866,0,0.420649922702764,0,0,0.122490799214954,0,0,0,0.127687338085188,0.46081959976873,0,0.0914876436024097,0,0,0,0.61119299110724,0.294628585473668,0.569486723196412,0.931997229126503,0.151452386666368,0.68014404096107,0,0,0,0,0.649776417447669,0,1.26399978118577,0,0,0,2.53518155598025,0,0,0,0,0,0,0.68510327831436,9.58070169494535,0.445326417194474,0.867426633830679,0.608930956624282,0,0.301445281105245,0.823120949949934,0,0.247194967734374,0.289198713839823,4.42305275974937,1.45590164952668,1.32504911076236,0.969750506270444,0,0,0.41889341362691,1.53274233125155,2.39630249011841,0.599902730993408,1.01656181658452,0,0.457500602818626,0.125654352112864,1.04294592115366,2.30143911597297,0.20778804455956,1.62241263067758,1.83310854930569,0.870848794270651,0,0.210441855886474,0.650602214813519,1.14951052216736,1.62055916824814,1.05493372485001,0.748401490664606,0.640568601424249,0.749613796477831,0.517406741478031,0.646703978798527,1.89106080167819,2.11141348996739,3.94552318369635,1.66828349535359,2.78601733217733,1.23469281844766,1.19420560091096,0.702213187313235,1.02939162845886,0.852490498186778,1.65700618028402,1.17263029990548,0.720248245844059,1.18372367792605,0.196764231747404,0.771335564436891,0.465067889500816,0.268273401399619,0.116765342367169,0.16455984991348,0.32833492815819,0.243206428637567,0.438599962275997,0,0.134206418760372,4.41608891984667,1.44066457330998,0.330418782983798,0.528901133327089,0.853153002140936,1.16118335930219,0.515469845288373,0.403367049246685,0.444756087689741,0.570676878337677,0,0.494096864172033,0.754005626400808,1.79060824837036,0.974820435595601,0,0.216138049874694,0.199141273254367,0.379335801906163,0.114248512609729,0,0.610953983535943,0.193952487167626,1.26244475802573,0.632365371242573,0.147610147979602,0.156998727841375,0.246794327843601,0.592905254174298,2.8363667971736,1.96558995113203,2.02375901146368,0.811440485554012,2.41177159752417,1.2731292589071,1.72617682470486,0.810676133875177,0,0,0.372140947668503,0.624075346229121,0,0.179397413521912,0.482443521363367,1.10851914099963,1.13694847062291,0.488894929326078,1.52770577197669,0.469380496577004,1.67506257441816,2.38043640886014,1.56106918286239,1.57635144106191,1.55025282754142,1.59454768657487,1.3109065177259,1.89953480052485,1.3018415272336,3.01582567878545,2.71952841909355,0,0.551873492609465,0.963303539926752,0.703270119553219,0,0.757412781613119,1.57754109708128,2.34263246577983,0.861693590931196,1.67278158566786,2.67358408898873,1.98153571552183,2.02405350837447,1.753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{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=entrezgene:16401
|HGNC=
|MCL_coexpression_id=33
|TSSclassifier=NA
|UniProt=uniprot:E9QK91,uniprot:Q00651,uniprot:Q792F9,uniprot:Q8BQ25
|association_with_transcript=-26bp_to_ENSMUST00000028395,ENSMUST00000155105,NM_010576,uc008kgo.1,uc008kgp.1,uc008kgq.1,uc008kgr.1_5end
|cluster_id=chr2:79095500..79095556,+
|description=CAGE_peak_3_at_Itga4_5end
|id=chr2:79095500..79095556,+
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=CL:0002031,6.12e-07,25
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0002390!7.24e-09!45;UBERON:0003061!7.24e-09!45;UBERON:0004177!9.91e-09!29;UBERON:0002193!1.25e-08!48;UBERON:0002370!1.17e-07!23;UBERON:0000974!1.17e-07!23;UBERON:0004807!1.17e-07!23;UBERON:0005058!1.17e-07!23;UBERON:0003351!1.17e-07!23;UBERON:0009113!1.17e-07!23;UBERON:0003295!1.17e-07!23;UBERON:0009722!1.17e-07!23;UBERON:0005562!1.17e-07!23;UBERON:0007690!1.17e-07!23;UBERON:0006562!8.40e-07!24;UBERON:0003408!8.40e-07!24;UBERON:0001557!8.40e-07!24;UBERON:0001042!8.40e-07!24;UBERON:0008814!8.40e-07!24;UBERON:0009145!8.40e-07!24
|ontology_enrichment_uberon_v019_2=UBERON:0002390,7.45e-12,45;UBERON:0003061,7.45e-12,45;UBERON:0004177,1.18e-11,29;UBERON:0005057,1.18e-11,29;UBERON:0002193,2.21e-11,48;UBERON:0002405,2.21e-11,48;UBERON:0002370,5.99e-10,23;UBERON:0000974,5.99e-10,23;UBERON:0004807,5.99e-10,23;UBERON:0005058,5.99e-10,23;UBERON:0003351,5.99e-10,23;UBERON:0009113,5.99e-10,23;UBERON:0003295,5.99e-10,23;UBERON:0009722,5.99e-10,23;UBERON:0005562,5.99e-10,23;UBERON:0007690,5.99e-10,23;UBERON:0006562,3.42e-09,24;UBERON:0003408,3.42e-09,24;UBERON:0001557,3.42e-09,24;UBERON:0001042,3.42e-09,24;UBERON:0008814,3.42e-09,24;UBERON:0009145,3.42e-09,24;UBERON:0000065,1.01e-08,41;UBERON:0001004,2.94e-08,42;UBERON:0000077,5.89e-08,35;UBERON:0000072,2.65e-07,27;UBERON:0000153,2.97e-07,43
|phase1_expression=0.160148847104794,0,0,0,0,0,0,26.3411579820816,3.51971805379167,2.34064526321993,0.513653904676515,0.319088635981346,28.7617226284426,29.1984144079451,2.33176833270964,4.04950534779652,4.89693314689703,15.2999150198745,15.6310454310542,9.76096199135469,1.10556277196391,0.794327609607082,2.08959831311148,0.799962113967033,0,0,0,0,0.190023419456374,0,0.221730510655305,0.635030673459631,1.23012957516914,0,0,0,0,1.67412652294763,0.7813353445238,0.523523743973798,0.588231488031014,2.04913645487534,0.971020706062307,0,0,0,0,0,0,0,0,0,11.5769998179838,14.5072428402269,13.1076581665561,0.257259436035947,0,0,0.404632921719196,0,1.26766280701236,0,0,0.449949858640699,0,0,0,0,0.622137673850866,0,0.420649922702764,0,0,0.122490799214954,0,0,0,0.127687338085188,0.46081959976873,0,0.0914876436024097,0,0,0,0.61119299110724,0.294628585473668,0.569486723196412,0.931997229126503,0.151452386666368,0.68014404096107,0,0,0,0,0.649776417447669,0,1.26399978118577,0,0,0,2.53518155598025,0,0,0,0,0,0,0.68510327831436,9.58070169494535,0.445326417194474,0.867426633830679,0.608930956624282,0,0.301445281105245,0.823120949949934,0,0.247194967734374,0.289198713839823,4.42305275974937,1.45590164952668,1.32504911076236,0.969750506270444,0,0,0.41889341362691,1.53274233125155,2.39630249011841,0.599902730993408,1.01656181658452,0,0.457500602818626,0.125654352112864,1.04294592115366,2.30143911597297,0.20778804455956,1.62241263067758,1.83310854930569,0.870848794270651,0,0.210441855886474,0.650602214813519,1.14951052216736,1.62055916824814,1.05493372485001,0.748401490664606,0.640568601424249,0.749613796477831,0.517406741478031,0.646703978798527,1.89106080167819,2.11141348996739,3.94552318369635,1.66828349535359,2.78601733217733,1.23469281844766,1.19420560091096,0.702213187313235,1.02939162845886,0.852490498186778,1.65700618028402,1.17263029990548,0.720248245844059,1.18372367792605,0.196764231747404,0.771335564436891,0.465067889500816,0.268273401399619,0.116765342367169,0.16455984991348,0.32833492815819,0.243206428637567,0.438599962275997,0,0.134206418760372,4.41608891984667,1.44066457330998,0.330418782983798,0.528901133327089,0.853153002140936,1.16118335930219,0.515469845288373,0.403367049246685,0.444756087689741,0.570676878337677,0,0.494096864172033,0.754005626400808,1.79060824837036,0.974820435595601,0,0.216138049874694,0.199141273254367,0.379335801906163,0.114248512609729,0,0.610953983535943,0.193952487167626,1.26244475802573,0.632365371242573,0.147610147979602,0.156998727841375,0.246794327843601,0.592905254174298,2.8363667971736,1.96558995113203,2.02375901146368,0.811440485554012,2.41177159752417,1.2731292589071,1.72617682470486,0.810676133875177,0,0,0.372140947668503,0.624075346229121,0,0.179397413521912,0.482443521363367,1.10851914099963,1.13694847062291,0.488894929326078,1.52770577197669,0.469380496577004,1.67506257441816,2.38043640886014,1.56106918286239,1.57635144106191,1.55025282754142,1.59454768657487,1.3109065177259,1.89953480052485,1.3018415272336,3.01582567878545,2.71952841909355,0,0.551873492609465,0.963303539926752,0.703270119553219,0,0.757412781613119,1.57754109708128,2.34263246577983,0.861693590931196,1.67278158566786,2.67358408898873,1.98153571552183,2.02405350837447,1.75353514746787,0.790575555893047,1.28528526568723,0.141940085208269,0.35613120733451,0.651547837414304,0.329940245945071,0,0.242780636154981,0,0,0.295301892880773,0.307435147943927,0.775284879504663,0,1.06949213515416,0.632073515871632,0,0,0,1.44048875225048,0.388076051348264,1.28602221018955,0,0.178368817602071,0.658196082408484,0.304464949114599,0,0,0,0.32977250588296,2.9063596805263,0.72375509913787,0.477489376012546,0.164140899745061,0.291480836629851,0.18542530201051,3.93003025835061,0,1.11116716421827,3.57900068308913,4.92099219795691,4.80434163733698,5.60928818979723,4.3384950220334,3.04039942369732,0,0.632671987162271,1.01659733563424,0.216010681643603,0.418176592028937,0.436725127492355,1.07891477107857,0.909188012978695,0.523511883968059,0.518459893167171,0,0,1.19613236835183,2.48187735685646,1.55560950675238,3.48731523389874,3.21016638432478,1.5256441023948,1.5624526181274,0.209718688851422,0.241584120826006,0,24.0168451677415,3.04087822935246,4.62199307241723,9.48422007737904,15.7543492187384,14.9011016085949,15.6254084375959,12.1105412283153,16.0536655417555,17.83239275727,16.0313634367576,23.0000598545816,21.5514525274338,31.9073942955683,0,0,0,0,0.386379188064381,0.187682475451182,0.183151624267265,0.643105137237198,0,1.6942555278512,4.14292712856459,2.29158205375759,3.26521046453006,2.74033007908257,1.5107877947794,2.02506750069542,1.80128481289688,2.26571204492102,3.10656187051092,0.830298780673413,1.99512436700516,2.21953687480374,1.70174701947806,1.67690530102386,0.367687016900028,2.00022055021454,1.44224540067226,0.962757628775446,1.26348605881899,1.52087579934144,1.13175804831646,1.591905626988,1.02440243847791,1.32101578597911,0.952587382566147,2.0859178670074,0.578727661391115,2.47251540481984,1.17759136107518,0.68573850477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|short_description=p3@Itga4
}}

Revision as of 13:02, 5 August 2015

Short description:p3@Itga4
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_3_at_Itga4_5end
Coexpression cluster:MCL_coexpression_mm9:33
Association with transcript: -26bp_to_ENSMUST00000028395, ENSMUST00000155105, NM_010576, uc008kgo.1, uc008kgp.1, uc008kgq.1, uc008kgr.1_5end
EntrezGene:16401
Link to Zenbu:ZENBU


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CAGE Expression

Sample

p3@Itga4

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.16
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E926.34
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E73.52
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F22.34
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.51
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.32
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E428.76
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E829.20
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A12.33
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A34.05
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A54.90
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A215.30
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A415.63
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A69.76
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A31.11
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.79
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I92.09
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.80
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.19
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.22
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.64
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G61.23
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G81.67
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.78
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.52
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.59
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H22.05
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.97
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.00
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.00
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.00
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.00
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A211.58
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I914.51
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A113.11
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.26
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C30.40
Mouse Granule cells, donor2.CNhs12357.11731-123E30.00
Mouse Granule cells, donor3.CNhs12108.11636-122C71.27
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.45
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.00
Mouse Microglia, donor2.CNhs12634.11736-123E80.00
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.62
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.00
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.42
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F10.00
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D50.00
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.12
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.00
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.00
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D30.00
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F30.13
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D70.46
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.00
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F40.09
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D80.00
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E40.00
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E50.00
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I60.61
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D60.29
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F60.57
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E10.93
Mouse Schwann, donor1.CNhs12507.11728-123D90.15
Mouse Schwann, donor2.CNhs12573.11746-123F90.68
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.00
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.65
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A71.26
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G62.54
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.69
accessory axillary lymph node, adult.CNhs10475.1063-29H99.58
adrenal gland, adult.CNhs10508.49-24D70.45
adrenal gland, embryo E14.CNhs11038.406-44C50.87
adrenal gland, embryo E16.CNhs11004.1254-43D60.61
adrenal gland, embryo E17.CNhs11043.1263-45I10.00
adrenal gland, embryo E18.CNhs11026.1262-18F50.30
adrenal gland, neonate N00.CNhs11191.1311-23C10.82
adrenal gland, neonate N25.CNhs11223.1377-27I30.00
amnion, adult pregnant day17.5.CNhs10488.583-22A80.25
aorta, adult.CNhs10498.46-23H10.29
bone (os femoris), adult.CNhs10483.56-12G24.42
bone (os femoris), neonate N02.CNhs11227.1985-43F51.46
bone (os femoris), neonate N16.CNhs11225.1525-43A61.33
bone (os femoris), neonate N20.CNhs11195.1350-25C30.97
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B20.00
cerebellum, neonate N30.CNhs11135.1395-42I20.42
colon, adult.CNhs10468.36-18H71.53
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C72.40
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.60
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D41.02
corpora quadrigemina, adult.CNhs10501.16-22A40.00
corpus striatum, adult.CNhs10487.19-21D80.46
corpus striatum, neonate N00.CNhs11226.630-43F10.13
cortex, adult.CNhs10473.12-14D51.04
cortex, neonate N30.CNhs11107.1392-42F22.30
diencephalon, adult.CNhs10482.20-12F20.21
diencephalon, neonate N30.CNhs11201.1388-42B21.62
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B11.83
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.87
epididymis, adult.CNhs10490.58-23B20.00
eyeball, adult.CNhs10484.31-12G40.21
eyeball, embryo E12.CNhs11016.345-16C60.65
eyeball, embryo E14.CNhs10521.399-16E21.15
eyeball, embryo E15.CNhs10593.426-16C91.62
eyeball, embryo E17.CNhs11023.1261-18D41.05
eyeball, neonate N00.CNhs11207.633-15C60.75
eyeball, neonate N01.CNhs11140.1532-43E70.64
eyeball, neonate N02.CNhs11205.1551-44G80.75
eyeball, neonate N16.CNhs11188.777-19A20.52
forelimb, embryo E11.CNhs10596.335-25E20.65
forelimb, embryo E12.CNhs10600.359-14H21.89
forelimb, embryo E13.CNhs10589.384-1E22.11
forelimb, embryo E14.CNhs10577.413-26A83.95
forelimb, embryo E15.CNhs11007.437-20E71.67
forelimb, embryo E17.CNhs10598.1517-43C42.79
forelimb, embryo E18.CNhs11008.1520-43B51.23
gonad, embryo E13.CNhs11044.1564-45I61.19
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.70
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D21.03
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.85
heart, embryo E11.CNhs10586.331-24E91.66
heart, embryo E12.CNhs11015.353-12F51.17
heart, embryo E13.CNhs11013.376-3I90.72
heart, embryo E14.CNhs10597.403-26D41.18
heart, embryo E15.CNhs11017.431-16C80.20
heart, embryo E16.CNhs11021.457-17C60.77
heart, embryo E17.CNhs11025.479-18E50.47
heart, embryo E18.CNhs11030.1283-20G30.27
heart, neonate N00.CNhs11213.639-21E30.12
heart, neonate N03.CNhs11221.1349-25I20.16
heart, neonate N10.CNhs11118.749-24G10.33
heart, neonate N16.CNhs11209.782-15G10.24
heart, neonate N20.CNhs11127.821-26I60.44
heart, neonate N25.CNhs11196.1351-25D30.00
heart, neonate N30.CNhs11202.1390-42D20.13
hippocampus, adult.CNhs10478.13-16E84.42
hippocampus, neonate N00.CNhs11228.627-43G11.44
intestinal mucosa, adult.CNhs10506.860-29I30.33
intestine, adult.CNhs10496.178-9A30.53
intestine, embryo E12.CNhs11019.1251-16I50.85
intestine, embryo E13.CNhs11010.381-16D51.16
intestine, embryo E15.CNhs10602.976-16D80.52
intestine, embryo E16.CNhs10585.463-22H40.40
intestine, embryo E17.CNhs10582.482-18D30.44
intestine, embryo E18.CNhs10526.1289-20F70.57
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.49
intestine, neonate N06.CNhs11102.688-20B80.75
intestine, neonate N07.CNhs11095.720-20F21.79
intestine, neonate N10.CNhs11098.755-23A50.97
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.22
intestine, neonate N30.CNhs11131.1384-42G10.20
kidney, embryo E14.CNhs10606.411-4I90.38
kidney, embryo E15.CNhs10997.434-16F80.11
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.61
kidney, embryo E18.CNhs11001.1288-20C70.19
kidney, neonate N00.CNhs11214.646-21G71.26
kidney, neonate N10.CNhs11206.758-6D50.63
kidney, neonate N20.CNhs11113.832-19I10.15
kidney, neonate N25.CNhs11122.1353-25F30.16
kidney, neonate N30.CNhs11203.1385-42H10.25
liver, adult pregnant day01.CNhs10466.508-5B20.59
liver, embryo E12.CNhs10601.355-15F82.84
liver, embryo E13.CNhs10524.378-3H61.97
liver, embryo E14.CNhs10594.409-16E12.02
liver, embryo E15.CNhs10520.433-16D70.81
liver, embryo E16.CNhs10523.462-17F52.41
liver, embryo E17.CNhs10510.481-18A31.27
liver, embryo E18.CNhs10579.499-43G41.73
liver, neonate N00.CNhs11117.641-24F40.81
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.37
liver, neonate N10.CNhs11115.751-24B90.62
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.18
liver, neonate N30.CNhs11106.1382-42D10.48
lung, adult.CNhs10474.28-22B11.11
lung, embryo E12.CNhs10522.354-16G21.14
lung, embryo E14.CNhs10604.404-26F80.49
lung, embryo E15.CNhs11020.432-17C51.53
lung, embryo E16.CNhs10998.458-17B60.47
lung, embryo E17.CNhs10605.480-44A61.68
lung, embryo E18.CNhs10583.1287-20I62.38
lung, neonate N00.CNhs11224.640-42C61.56
lung, neonate N06.CNhs11212.683-20E51.58
lung, neonate N07.CNhs11111.715-19A31.55
lung, neonate N10.CNhs11219.750-23E61.59
lung, neonate N20.CNhs11109.822-18A41.31
lung, neonate N25.CNhs11119.1359-25C71.90
lung, neonate N30.CNhs11133.1394-42H21.30
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A13.02
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A12.72
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.55
medulla oblongata, adult.CNhs10477.17-12C20.96
medulla oblongata, neonate N30.CNhs11200.1396-42A30.70
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.76
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E11.58
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E22.34
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.86
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D71.67
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D82.67
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D91.98
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D42.02
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D51.75
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.79
olfactory brain, adult.CNhs10489.18-22I91.29
ovary, adult.CNhs10507.91-2I70.14
ovary, embryo E18.CNhs11040.505-44H70.36
ovary, neonate N00.CNhs11217.1299-22I40.65
oviduct, adult pregnant day01.CNhs10500.988-6G60.33
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.24
pancreas, embryo E15.CNhs11042.1556-45F20.00
pancreas, embryo E16.CNhs11003.460-26E50.00
pancreas, embryo E17.CNhs10599.1558-45G30.30
pancreas, embryo E18.CNhs10580.1535-43I70.31
pancreas, neonate N00.CNhs11105.645-26G90.78
pancreas, neonate N01.CNhs11138.1531-43D70.00
pancreas, neonate N02.CNhs11139.1539-43D81.07
pancreas, neonate N16.CNhs11136.787-43B60.63
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G80.00
pituitary gland, embryo E12.CNhs11018.346-16E61.44
pituitary gland, embryo E13.CNhs11009.370-44C70.39
pituitary gland, embryo E14.CNhs11037.398-44A51.29
pituitary gland, embryo E15.CNhs10592.427-16B90.00
pituitary gland, embryo E16.CNhs11036.449-43F60.18
pituitary gland, embryo E17.CNhs11039.1265-44F50.66
pituitary gland, neonate N00.CNhs11190.1308-22E90.30
placenta, adult pregnant day10.CNhs10472.539-13I70.00
placenta, adult pregnant day17.CNhs10464.577-18G30.00
prostate, adult.CNhs10470.859-1F80.00
skin, adult.CNhs10492.30-1C30.33
skin, neonate N00.CNhs11124.650-25G42.91
skin, neonate N03.CNhs11215.662-22H30.72
skin, neonate N06.CNhs11097.693-20I50.48
skin, neonate N10.CNhs11108.762-6C40.16
small intestine, neonate N16.CNhs11114.790-21I10.29
spinal cord, adult.CNhs10505.24-13C90.19
spleen, adult.CNhs10465.25-2G23.93
spleen, embryo E16.CNhs11035.461-43C10.00
spleen, embryo E18.CNhs11011.1271-21F21.11
spleen, neonate N10.CNhs11116.752-24D13.58
spleen, neonate N20.CNhs11112.824-19H14.92
spleen, neonate N25.CNhs11099.1354-25G34.80
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C65.61
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C94.34
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D33.04
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.63
stomach, embryo E15.CNhs10603.1252-16G81.02
stomach, embryo E16.CNhs11022.459-17D40.22
stomach, embryo E17.CNhs11006.1035-18D50.42
stomach, embryo E18.CNhs10999.1286-20C60.44
stomach, neonate N03.CNhs11193.1340-24B81.08
stomach, neonate N07.CNhs11210.718-18A90.91
stomach, neonate N25.CNhs11104.1355-25E40.52
stomach, neonate N30.CNhs11134.1386-42I10.52
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F51.20
testis, embryo E15.CNhs11034.443-27C52.48
testis, embryo E16.CNhs11033.470-26G51.56
testis, embryo E17.CNhs11029.486-18I53.49
testis, embryo E18.CNhs11027.503-18G53.21
testis, neonate N00.CNhs11189.1300-22B71.53
testis, neonate N07.CNhs11222.726-26I41.56
testis, neonate N10.CNhs11204.763-44D90.21
testis, neonate N20.CNhs11110.839-18H30.24
testis, neonate N30.CNhs11130.1391-42E20.00
thymus, adult.CNhs10471.38-12B524.02
thymus, embryo E14.CNhs11041.402-44I43.04
thymus, embryo E15.CNhs11005.430-45I24.62
thymus, embryo E16.CNhs11002.456-26C59.48
thymus, embryo E17.CNhs10581.478-18C115.75
thymus, embryo E18.CNhs10595.1273-19G414.90
thymus, neonate N02.CNhs11181.1541-43F815.63
thymus, neonate N03.CNhs11137.2104-43C712.11
thymus, neonate N06.CNhs11197.681-26C416.05
thymus, neonate N07.CNhs11211.713-19D317.83
thymus, neonate N10.CNhs11194.748-24E416.03
thymus, neonate N20.CNhs11186.820-7A223.00
thymus, neonate N25.CNhs11125.1362-25G721.55
thymus, neonate N30.CNhs11132.1393-42G231.91
tongue, adult.CNhs10499.32-1B40.00
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E40.39
uterus, adult pregnant day19.CNhs10497.590-15F50.19
uterus, adult.CNhs10509.92-27E50.18
vagina, adult.CNhs10502.89-27D50.64
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A11.69
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A24.14
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A32.29
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D73.27
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A42.74
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A51.51
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A62.03
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A71.80
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A82.27
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A93.11
whole body, embryo E11.CNhs11014.324-5I80.83
whole body, embryo E12.CNhs10587.857-27C92.00
whole body, embryo E13.CNhs10512.372-23H22.22
whole body, embryo E14.5.CNhs10578.420-27D21.70
whole body, embryo E14.CNhs10519.395-14B11.68
whole body, embryo E16.CNhs10514.453-14F20.37
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G52.00
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G51.44
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.96
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G51.26
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G51.52
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G51.13
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G51.59
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G51.02
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G51.32
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.95
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G52.09
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.58
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G52.47
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G51.18
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G50.69
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G51.77
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G51.67
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G51.31
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G51.41
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G51.10
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G52.20
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G51.58
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G51.36
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G51.68
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G52.37
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G51.67
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G53.27
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G51.39
whole body, embryo E17.5.CNhs10513.490-9F92.31
whole body, embryo E17.CNhs10517.475-3I51.25
whole body, embryo E18.CNhs10516.493-3B32.34
whole body, neonate N00.CNhs10525.657-19C21.72
whole body, neonate N01.CNhs10576.659-23C60.57
whole body, neonate N06.CNhs10515.692-21D10.44
whole body, neonate N10.CNhs10518.761-6B40.93





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Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
hematopoietic lineage restricted progenitor cell6.12e-0725

Uber anatomy
Ontology termp-valuen
hematopoietic system7.45e-1245
blood island7.45e-1245
hemopoietic organ1.18e-1129
immune organ1.18e-1129
hemolymphoid system2.21e-1148
immune system2.21e-1148
thymus5.99e-1023
neck5.99e-1023
respiratory system epithelium5.99e-1023
hemolymphoid system gland5.99e-1023
pharyngeal epithelium5.99e-1023
thymic region5.99e-1023
pharyngeal gland5.99e-1023
entire pharyngeal arch endoderm5.99e-1023
thymus primordium5.99e-1023
early pharyngeal endoderm5.99e-1023
pharynx3.42e-0924
gland of gut3.42e-0924
upper respiratory tract3.42e-0924
chordate pharynx3.42e-0924
pharyngeal arch system3.42e-0924
pharyngeal region of foregut3.42e-0924
respiratory tract1.01e-0841
respiratory system2.94e-0842
mixed endoderm/mesoderm-derived structure5.89e-0835
segment of respiratory tract2.65e-0727
anterior region of body2.97e-0743
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