FFCP PHASE1:Hg19::chr7:3476655..3476670,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=not | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr7:3476655..3476670,+ | |||
|id=chr7:3476655..3476670,+ | |||
|ontology_enrichment_celltype=CL:0000220!9.38e-20!246;CL:0002321!2.51e-19!248;CL:0000548!2.76e-15!679;CL:0000004!2.76e-15!679;CL:0000255!2.76e-15!679;CL:0000144!5.18e-15!625;CL:0000012!6.02e-15!682;CL:0000222!7.65e-14!119;CL:0002371!5.45e-12!591;CL:0000066!1.99e-11!254;CL:0000055!2.23e-11!180;CL:0000003!1.02e-10!722;CL:0000076!1.66e-09!62;CL:0000128!3.45e-08!7;CL:0000126!3.45e-08!7;CL:0000127!3.45e-08!7;CL:0002453!3.45e-08!7;CL:0000680!5.18e-08!57;CL:0000056!5.18e-08!57;CL:0000355!5.18e-08!57;CL:0000183!9.30e-08!59;CL:0000213!1.76e-07!57;CL:0000215!1.76e-07!57 | |||
|ontology_enrichment_celltype_v019=CL:0000128;9.21e-12;7!CL:0000126;9.21e-12;7!CL:0000127;9.21e-12;7!CL:0000243;5.81e-10;15!CL:0000125;5.81e-10;15!CL:0000095;1.27e-08;17!CL:0000680;2.79e-08;7!CL:0000306;7.86e-07;4!CL:0002222;7.86e-07;4!CL:0002224;7.86e-07;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0002321,3.95e-14,250;CL:0000128,8.81e-12,7;CL:0000126,8.81e-12,7;CL:0000127,8.81e-12,7;CL:0002453,8.81e-12,7;CL:0000222,7.54e-11,121;CL:0000243,6.95e-10,15;CL:0000125,6.95e-10,15;CL:0000030,6.95e-10,15;CL:0000339,6.95e-10,15;CL:0000095,1.48e-08,17;CL:0000123,1.48e-08,17;CL:0000076,1.88e-07,63;CL:0000306,5.07e-07,4;CL:0002222,5.07e-07,4;CL:0002224,5.07e-07,4 | |||
|ontology_enrichment_development_v019=CL:0000339;5.81e-10;15 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001444!3.80e-12!48;UBERON:0000481!4.32e-12!347;UBERON:0002200!8.18e-12!11;UBERON:0006876!8.18e-12!11;UBERON:0007625!4.62e-10!11;UBERON:0000475!8.64e-10!365;UBERON:0000914!9.91e-10!83;UBERON:0002329!9.91e-10!83;UBERON:0003077!9.91e-10!83;UBERON:0003059!9.91e-10!83;UBERON:0007282!9.91e-10!83;UBERON:0009618!9.91e-10!83;UBERON:0007285!9.91e-10!83;UBERON:0000119!1.10e-09!312;UBERON:0005085!2.46e-09!29;UBERON:0005256!2.52e-09!143;UBERON:0000483!1.09e-08!309;UBERON:0001801!1.51e-08!14;UBERON:0001456!2.01e-08!21;UBERON:0000490!2.20e-08!138;UBERON:0000019!2.26e-08!19;UBERON:0000047!2.26e-08!19;UBERON:0004088!2.26e-08!19;UBERON:0003072!2.26e-08!19;UBERON:0003071!2.26e-08!19;UBERON:0004128!2.26e-08!19;UBERON:0000970!9.81e-08!20;UBERON:0000033!2.01e-07!123;UBERON:0002203!2.65e-07!6;UBERON:0001768!2.65e-07!6;UBERON:0002104!3.67e-07!21;UBERON:0003104!5.16e-07!238;UBERON:0009142!5.16e-07!238;UBERON:0000486!5.58e-07!82;UBERON:0000020!5.99e-07!23;UBERON:0001134!6.25e-07!61;UBERON:0002036!6.25e-07!61;UBERON:0003082!6.25e-07!61;UBERON:0002090!7.63e-07!6 | |||
|ontology_enrichment_uberon_v019=UBERON:0006876;2.82e-17;11!UBERON:0001801;6.82e-13;14!UBERON:0002203;2.51e-10;6!UBERON:0001768;2.51e-10;6!UBERON:0002200;2.51e-10;6!UBERON:0000075;4.08e-10;16!UBERON:0010371;9.03e-10;31!UBERON:0001456;3.52e-09;21!UBERON:0000019;9.46e-09;19!UBERON:0000047;9.46e-09;19!UBERON:0004088;9.46e-09;19!UBERON:0010230;9.46e-09;19!UBERON:0007625;1.00e-08;11!UBERON:0005284;1.30e-08;5!UBERON:0001444;1.47e-08;48!UBERON:0000970;3.55e-08;20!UBERON:0011135;4.50e-08;5!UBERON:0002216;4.50e-08;5!UBERON:0011134;4.50e-08;5!UBERON:0002209;4.50e-08;5!UBERON:0002213;4.50e-08;5!UBERON:0007844;4.50e-08;5!UBERON:0011138;4.50e-08;5!UBERON:0001130;4.50e-08;5!UBERON:0001066;4.50e-08;5!UBERON:0001468;4.50e-08;5!UBERON:0002104;1.17e-07;21!UBERON:0003104;1.29e-07;7!UBERON:0009142;1.29e-07;7!UBERON:0004765;1.33e-07;26!UBERON:0000488;1.81e-07;4!UBERON:0001828;2.31e-07;8!UBERON:0003729;5.22e-07;13!UBERON:0007811;5.92e-07;52!UBERON:0000033;7.19e-07;50!UBERON:0010077;7.86e-07;4!UBERON:0005389;7.86e-07;4!UBERON:0000484;7.86e-07;4!UBERON:0000965;7.86e-07;4!UBERON:0001803;7.86e-07;4!UBERON:0000020;9.15e-07;23 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0006876,2.30e-17,11;UBERON:0001801,4.12e-13,14;UBERON:0000033,4.23e-13,56;UBERON:0001444,7.72e-12,49;UBERON:0000153,4.12e-11,62;UBERON:0007811,4.12e-11,62;UBERON:0002203,2.02e-10,6;UBERON:0001768,2.02e-10,6;UBERON:0002200,2.02e-10,6;UBERON:0000075,4.21e-10,16;UBERON:0007625,6.96e-09,11;UBERON:0001456,1.01e-08,22;UBERON:0005284,1.31e-08,5;UBERON:0000019,2.56e-08,20;UBERON:0000047,2.56e-08,20;UBERON:0010312,2.56e-08,20;UBERON:0004088,2.56e-08,20;UBERON:0010230,2.56e-08,20;UBERON:0003072,2.56e-08,20;UBERON:0004128,2.56e-08,20;UBERON:0003071,2.56e-08,20;UBERON:0011135,5.92e-08,5;UBERON:0002216,5.92e-08,5;UBERON:0011134,5.92e-08,5;UBERON:0002209,5.92e-08,5;UBERON:0002213,5.92e-08,5;UBERON:0005856,5.92e-08,5;UBERON:0005866,5.92e-08,5;UBERON:0005863,5.92e-08,5;UBERON:0007844,5.92e-08,5;UBERON:0011138,5.92e-08,5;UBERON:0001130,5.92e-08,5;UBERON:0001066,5.92e-08,5;UBERON:0001468,5.92e-08,5;UBERON:0000970,8.59e-08,21;UBERON:0002104,8.59e-08,21;UBERON:0011137,1.14e-07,14;UBERON:0000488,1.66e-07,4;UBERON:0005085,2.02e-07,31;UBERON:0001828,2.65e-07,8;UBERON:0010077,5.07e-07,4;UBERON:0005389,5.07e-07,4;UBERON:0000484,5.07e-07,4;UBERON:0002546,5.07e-07,4;UBERON:0000965,5.07e-07,4;UBERON:0001803,5.07e-07,4;UBERON:0003073,5.07e-07,4;UBERON:0005426,5.07e-07,4;UBERON:0003729,5.75e-07,13 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0.245733936501509,1.39560233594486,0,0.263766978228454,3.21792517696121,3.97676850873499,0,0,0.730310090387373,0,2.83178433576612,4.28401451612931,1.25381888591235,2.28988789704845,5.61185142798825,5.77496142136093,0,0,0,0,0,0,0,0.30120591877825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.43806866313962,0,0.12786256184353,0,0,0,0,0,11.0605736081959,3.99112915432615,5.62142628436007,0,0,0,0,0,0,0,0,0,0.39752481473341,0,1.04142150482278,0,1.25849830862972,2.75118041940067,1.04497483268405,0,0.35576626268671,0,1.20848795132744,0,0.24406205754817,0,0,2.05389375053383,0.898117490504679,0.675668882899933,0,0,0,0,0,1.3082821564276,0,0.12663051166458,0,0,0,2.24271040056923,0,0,0.622422070799533,0.808264032418128,1.79808093424805,1.66493170409425,1.15235184896,5.62371436401112,0,0,0.149448680551801,0,0.485618833104395,0.280901613404497,7.55370433643105,2.7023549808589,2.37649296704261,0,0.247266929278557,1.82032272387605,1.43723628363248,1.34668891163253,2.75260743718321,2.77064115484183,0,0,0,2.26864366320042,0.179389635688862,0,0,0,0,0,0,0,0,0,0,0.484938170456436,0,0.10075209822764,0,3.09217365061275,2.18196896472668,3.72845974005705,0,0,0,0,0,0,0,0,0,0.928735856063958,1.44375896333917,0,0,0,0,0,0,0,0,0,0,0,2.057870056657,0,0,0,0,0,0,1.3725424823882,7.57276969319516,0,0,1.75918045801206,11.4032906858614,0,5.77325368101093,1.62302566965108,1.52631302506568,2.7429625074604,0.925971025153221,1.52203321787679,0,0,0,0,0,3.74935335947108,4.87148171776693,0.992425680696705,0.626909658919938,0.581267877027924,0.383382679165211,0,0,0,0,0,0,0.381988425558278,0,0,0.102827492703324,0,0,2.80327710863402,2.1798003441664,1.83345714552375,2.84397774667111,3.57656445851882,0,0,0,1.54324424557285,5.67396528093113,2.93064396917709,1.42977993658148,2.71310802695722,3.29296134712308,0.65147236858747,0.355391948742546,1.58390374586686,0,0,0,0,0,0,0.958499421966331,1.14861935834114,0,4.05387658669222,2.67119219315498,1.25342674267927,0,0,0,0,0,0,0,0,0,0,0,0,1.47229790062968,1.00034104211935,3.52644530809656,0,0.535286966391485,0.157702415033935,0,1.20378439891088,0,1.03473071292505,0,1.10621501125022,0,1.17480694477644,0,0,0,0,0.303127571446259,1.66435439510497,0.604780586659361,0,0,0,0,0,0,0,0,0,0,0,0.116210378459959,0,3.80962293576241,0,0,0,0.262248829918848,0,0,0.784349769176855,0,0.105551628892876,0,0.170093705276516,1.51141141271498,0,0.812839312631559,1.50506932156456,0,0,0.223874754722178,0,0,0.256450125116389,0.984043937099117,0.325378394664303,0,0,0,2.29706215198469,2.60024098414608,0,1.06337790121334,0.770243085573222,1.07452572308291,0.689182862422653,14.5017330572169,4.35050081742686,1.87498580315422,0.267096106940212,0.330569830721956,0.384380134730212,2.04180339991335,0,0,0,0,0,0,0,0,0.429374660225974,4.46590043231601,8.22586504268687,7.24394736910534,2.55897791311334,0.855877976067841,0,0,7.01502584574927,1.92175920815238,2.23843564456804,0,0,0,5.36397112998549,0,0,0.136499911407986,0.141405431953713,0,0,0,0,1.73632660280006,0,0,0.30982349809975,0.563391205064483,1.43411352204052,3.7334635584986,0.35667105148125,0,0,0,2.65631221636001,4.89908608342976,0.0962221127255121,0,1.08890984861323,0,0.86101074534246,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.71623345421307,0,0,0,0,0,0,0,0,0,0,11.9654358527521,0,0,0.269605053441981,0,0,0,0,2.22273980289274,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113942055847001,0,0,0,0.957003479195758,0.0915975934018623,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.782658475728359,0,0,0,0,0,0,0,0,2.64793564700399,2.5114633472578,3.58417289318877,0,0,0,0.293977192243133,13.0588809870604,0,0,0,0,0,0,0,0,3.97421581475578,0,0,0,0,0,0,0,0,0,0,0.372757606696298,0,3.66941356398758,3.03348254305766,2.24396078799908,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0984274815147488,0,0,0,0,0,0,0,0,0,0,0,0,0.211200673038813,0.35857467866569,4.03021914370835,0,0,0,0,0,0,4.7892076624995,0,0.340776043570843,1.24643300672138,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.24980407962107,0.151649117541648,0,0.235265819698172,0,0,0,0,0,0,0,0,0,0,0,0,0.159296767163702,0,0.310525913752519,0,0.265841714557995,0,0,0.380805212168795,0,0.181848659202559,0.429642228169954,0,0,8.80061082258938,0,0,0,0,0.214441591374926,1.30497145982606,2.94717703165954,6.94567422971502,7.83157454420696,6.62628712001503,0.926404341482917,0.657852148736121,1.94358060540469,3.27953865060555,0,0,3.10887307558079,7.59649890443455,0,0,0,0,0,0,0,0,0,0,6.2426754892352,0,0,0,0,0,0,0.109209638192014,0,0,0,0,0,0,0,2.1160556621441,0,0,0,0,0,0,0,0,0,0.392590874004102,0.11796972334774,2.01771458373847,0.115525666150338,0.381382095467167,1.3807198521202,0,0,0,0,0,4.74938560779281,0.147856086217045,0,0,0,0,0,0,0,0,2.29972369751271,0,0,0,0,0.0887023701626388,0,0.342976018874837,0,0,0.236387681767936,1.22354542081276,0,0,0,0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| |||
|short_description=p@chr7:3476655..3476670,+ | |||
}} |
Revision as of 15:30, 22 January 2014
Short description: | p@chr7:3476655..3476670, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr7:3476655..3476670, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic cell | 3.95e-14 | 250 |
oligodendrocyte | 8.81e-12 | 7 |
macroglial cell | 8.81e-12 | 7 |
astrocyte | 8.81e-12 | 7 |
oligodendrocyte precursor cell | 8.81e-12 | 7 |
mesodermal cell | 7.54e-11 | 121 |
glial cell (sensu Vertebrata) | 6.95e-10 | 15 |
glial cell | 6.95e-10 | 15 |
glioblast | 6.95e-10 | 15 |
glioblast (sensu Vertebrata) | 6.95e-10 | 15 |
neuron associated cell | 1.48e-08 | 17 |
neuron associated cell (sensu Vertebrata) | 1.48e-08 | 17 |
squamous epithelial cell | 1.88e-07 | 63 |
crystallin accumulating cell | 5.07e-07 | 4 |
vertebrate lens cell | 5.07e-07 | 4 |
lens epithelial cell | 5.07e-07 | 4 |