FFCP PHASE1:Mm9::chr3:135100948..135100970,-: Difference between revisions
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{{FFCP|EntrezGene=|HGNC=|MCL_coexpression_id=880|UniProt=|association_with_transcript=-225bp_to_ENSMUST00000169027_5end|description=CAGE_peak_1_at_ENSMUST00000169027_5end|id=chr3:135100948..135100970,-|ontology_enrichment_celltype=CL:0000144!3.62e-07!121;CL:0000012!3.62e-07!121;CL:0000542!8.37e-07!13;CL:0000051!8.37e-07!13|ontology_enrichment_celltype_v019_2=CL:0000988,6.03e-15,32;CL:0002032,6.03e-15,32;CL:0000037,6.03e-15,32;CL:0000837,6.03e-15,32;CL:0000791,8.15e-13,9;CL:0000789,8.15e-13,9;CL:0002420,8.15e-13,9;CL:0002419,8.15e-13,9;CL:0000790,8.15e-13,9;CL:0000838,6.01e-12,12;CL:0002563,3.20e-11,9;CL:0002251,3.20e-11,9;CL:0000624,6.31e-11,8;CL:0000542,6.60e-11,13;CL:0000051,6.60e-11,13;CL:0002320,1.02e-10,46;CL:0000134,1.02e-10,46;CL:0000084,2.94e-10,11;CL:0000827,2.94e-10,11;CL:0000034,1.13e-09,97;CL:0000239,3.10e-09,6;CL:0000677,3.10e-09,6;CL:0000584,3.10e-09,6;CL:0000219,1.59e-08,54;CL:0000738,5.65e-08,17;CL:0002087,5.65e-08,17;CL:0000075,7.41e-08,7;CL:0000723,8.61e-08,91;CL:0000048,8.61e-08,91;CL:0002031,1.22e-07,25;CL:0000066,7.37e-07,25;CL:0000893,8.53e-07,6;CL:0002489,8.53e-07,6;CL:0000898,8.53e-07,6;CL:0000809,8.53e-07,6;CL:0000810,8.53e-07,6;CL:0000895,8.53e-07,6;CL:0000808,8.53e-07,6;CL:0000894,8.53e-07,6;CL:0000806,8.53e-07,6;CL:0000807,8.53e-07,6;CL:0000805,8.53e-07,6;CL:0002425,8.53e-07,6;CL:0002436,8.53e-07,6;CL:0002427,8.53e-07,6;CL:0002428,8.53e-07,6;CL:0002429,8.53e-07,6;CL:0002433,8.53e-07,6;CL:0002431,8.53e-07,6;CL:0002432,8.53e-07,6|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=DOID:0050686,1.25e-08,6;DOID:0060100,9.21e-07,3;DOID:4045,9.21e-07,3|ontology_enrichment_uberon=|ontology_enrichment_uberon_v019_2=UBERON:0003350,3.20e-11,9;UBERON:0004808,3.20e-11,9;UBERON:0001277,3.20e-11,9;UBERON:0002384,1.02e-10,46;UBERON:0000485,5.52e-09,11;UBERON:0001242,1.94e-07,13;UBERON:0001262,1.94e-07,13;UBERON:0004786,1.94e-07,13|phase1_expression=0.160148847104794,3.48975407639361,1.81999695755814,2.11724947914781,3.50627010962443,1.17515490338323,0.467225281191051,7.87652272993615,3.09735188733667,3.27690336850791,0.171217968225505,0.159544317990673,4.96482116800497,4.98296293788285,0,0,0,0,0.411343300817216,0,0.17008658030214,0.198581902401771,0.522399578277871,0.319984845586813,0.45881856213434,1.14846392823004,1.29228598847722,0.646413698057667,0,0,0.443461021310609,3.17515336729816,1.23012957516914,0,2.3108129580102,0.166234645358492,1.42918549383658,1.67412652294763,2.3440060335714,1.0470474879476,5.88231488031014,3.41522742479223,0.485510353031154,0.755380907853464,0.202753862439029,0.367093504323363,0,0.218025156380447,0,0.194429899074283,0.279972843250725,0,2.18117387875057,7.25362142011344,2.35265659399725,0.257259436035947,0,0,0.202316460859598,0,0,0,0,0,0,0,0,0,0,0.135005938331691,0,0,0.220868540951614,0.122490799214954,0.191690942036473,0,0,0.127687338085188,0,0.395658863190582,0.274462930807229,0.52091337055676,0.279182999001381,0.56276261003168,0.45839474333043,0,0.142371680799103,0.559198337475902,0,0,7.53647670624362,0,0,0,0,0.448026887097336,0.421333260395256,0,0,0,0.14084341977668,0,0,0,0,0.506719730950197,0.505524445014783,0,0.258937883647172,0,0,0,0,0,0,0,0,0.144599356919912,0,0.161766849947409,0,0,0,0.292780797011547,0.209446706813455,0.255457055208591,2.27648736561249,2.39961092397363,1.77898317902291,0,0.457500602818626,0.376963056338593,0,0,0,0,0,0.124406970610093,0.252722758433675,0.210441855886474,0.130120442962704,0,0.540186389416048,0.452114453507145,0.136072998302656,0.12811372028485,0,0,0.431135985865684,0.756424320671277,0.175951124163949,0,0,0,1.64625709126355,0,2.80885274925294,2.57347907114715,1.13665399758237,0,0,0,0.23674473558521,0,0,0,0,0.233530684734339,0.16455984991348,0,0,0,0,0,0,0.205809224758569,0,0,0.426576501070468,0.232236671860439,0,0.201683524623343,0.22237804384487,0.190225626112559,0,0.329397909448022,0,0,0,0,0.216138049874694,0,0.189667900953082,0,0,0.407302655690628,0,0,0.0632365371242573,0.295220295959204,0.31399745568275,0.123397163921801,0.592905254174298,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.964887042726734,0,0.37898282354097,0,0,0,0.167506257441816,0,0.195133647857799,0,0,0,0,0,0,0,0,0.491764273019036,0,0.481651769963376,0.234423373184406,0.163934945376675,0.252470927204373,0.631016438832513,1.95219372148319,0.215423397732799,0,0.891194696329576,0.283076530788832,0.404810701674894,0.876767573733936,0.395287777946524,0,0,0,0,0.329940245945071,0,0,0,0.188605079755898,0,0.307435147943927,0,0,0,0,0,0,0.340439605753788,0.18006109403131,0.905510786479282,0.214337035031592,0.177340233642274,0.178368817602071,0.329098041204242,0.608929898229199,0,0.42366414172764,0,0.98931751764888,1.61464426695906,0.904693873922338,0.716234064018819,1.31312719796049,0,0,0,0,0,0,0,0,1.35982743995084,3.07893195112048,1.52019971184866,0,0.158167996790568,0.203319467126849,0.108005340821801,0.627264888043406,1.09181281873089,0.134864346384821,0.165306911450672,0,0.259229946583586,0,1.69107881605257,0.299033092087958,0,0.388902376688095,0.129159823477731,0.337912250981556,0,0.2604087696879,0.104859344425711,0.483168241652012,0,0.948033361884535,0,0.102710957164827,0,0,0.596044064343795,0,0.147689527174577,0.201932899896295,0.228620419965,0.100826185136841,0.292373642219257,0.481059208201647,0.233753804363138,0.453460767230423,0.887943813496259,0.269141569828427,0,0,0,0.183151624267265,1.50057865355346,0,0,0,0,0.171853182343688,0.685082519770642,0,0,0,0,0.51776031175182,0.518936737920883,0,0.682934423016537,0,0,0,0.222246727801615,0.206035057238894,0.320919209591815,1.01078884705519,0.760437899670719,0,0.468207537349412,0,0.17230640686684,0,0.115884325944855,0,0,0.147198920134397,0.342869252385415,0,0.715308569841963,0.145346416632329,0.0941093804153306,0,0,0.263069711437843,0,0,0.237270036248348,0,0,0.154936841185966,0.771626443924566,0,0.233931608445408,0.214871054048298,0.191288332068843,0.220591419119515,0|short_description=p1@ENSMUST00000169027}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene= | |||
|HGNC= | |||
|MCL_coexpression_id=880 | |||
|TSSclassifier=NA | |||
|UniProt= | |||
|association_with_transcript=-225bp_to_ENSMUST00000169027_5end | |||
|cluster_id=chr3:135100948..135100970,- | |||
|description=CAGE_peak_1_at_ENSMUST00000169027_5end | |||
|id=chr3:135100948..135100970,- | |||
|ontology_enrichment_celltype=CL:0000144!3.62e-07!121;CL:0000012!3.62e-07!121;CL:0000542!8.37e-07!13;CL:0000051!8.37e-07!13 | |||
|ontology_enrichment_celltype_v019_2=CL:0000988,6.03e-15,32;CL:0002032,6.03e-15,32;CL:0000037,6.03e-15,32;CL:0000837,6.03e-15,32;CL:0000791,8.15e-13,9;CL:0000789,8.15e-13,9;CL:0002420,8.15e-13,9;CL:0002419,8.15e-13,9;CL:0000790,8.15e-13,9;CL:0000838,6.01e-12,12;CL:0002563,3.20e-11,9;CL:0002251,3.20e-11,9;CL:0000624,6.31e-11,8;CL:0000542,6.60e-11,13;CL:0000051,6.60e-11,13;CL:0002320,1.02e-10,46;CL:0000134,1.02e-10,46;CL:0000084,2.94e-10,11;CL:0000827,2.94e-10,11;CL:0000034,1.13e-09,97;CL:0000239,3.10e-09,6;CL:0000677,3.10e-09,6;CL:0000584,3.10e-09,6;CL:0000219,1.59e-08,54;CL:0000738,5.65e-08,17;CL:0002087,5.65e-08,17;CL:0000075,7.41e-08,7;CL:0000723,8.61e-08,91;CL:0000048,8.61e-08,91;CL:0002031,1.22e-07,25;CL:0000066,7.37e-07,25;CL:0000893,8.53e-07,6;CL:0002489,8.53e-07,6;CL:0000898,8.53e-07,6;CL:0000809,8.53e-07,6;CL:0000810,8.53e-07,6;CL:0000895,8.53e-07,6;CL:0000808,8.53e-07,6;CL:0000894,8.53e-07,6;CL:0000806,8.53e-07,6;CL:0000807,8.53e-07,6;CL:0000805,8.53e-07,6;CL:0002425,8.53e-07,6;CL:0002436,8.53e-07,6;CL:0002427,8.53e-07,6;CL:0002428,8.53e-07,6;CL:0002429,8.53e-07,6;CL:0002433,8.53e-07,6;CL:0002431,8.53e-07,6;CL:0002432,8.53e-07,6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2=DOID:0050686,1.25e-08,6;DOID:0060100,9.21e-07,3;DOID:4045,9.21e-07,3 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003350,3.20e-11,9;UBERON:0004808,3.20e-11,9;UBERON:0001277,3.20e-11,9;UBERON:0002384,1.02e-10,46;UBERON:0000485,5.52e-09,11;UBERON:0001242,1.94e-07,13;UBERON:0001262,1.94e-07,13;UBERON:0004786,1.94e-07,13 | |||
|phase1_expression=0.160148847104794,3.48975407639361,1.81999695755814,2.11724947914781,3.50627010962443,1.17515490338323,0.467225281191051,7.87652272993615,3.09735188733667,3.27690336850791,0.171217968225505,0.159544317990673,4.96482116800497,4.98296293788285,0,0,0,0,0.411343300817216,0,0.17008658030214,0.198581902401771,0.522399578277871,0.319984845586813,0.45881856213434,1.14846392823004,1.29228598847722,0.646413698057667,0,0,0.443461021310609,3.17515336729816,1.23012957516914,0,2.3108129580102,0.166234645358492,1.42918549383658,1.67412652294763,2.3440060335714,1.0470474879476,5.88231488031014,3.41522742479223,0.485510353031154,0.755380907853464,0.202753862439029,0.367093504323363,0,0.218025156380447,0,0.194429899074283,0.279972843250725,0,2.18117387875057,7.25362142011344,2.35265659399725,0.257259436035947,0,0,0.202316460859598,0,0,0,0,0,0,0,0,0,0,0.135005938331691,0,0,0.220868540951614,0.122490799214954,0.191690942036473,0,0,0.127687338085188,0,0.395658863190582,0.274462930807229,0.52091337055676,0.279182999001381,0.56276261003168,0.45839474333043,0,0.142371680799103,0.559198337475902,0,0,7.53647670624362,0,0,0,0,0.448026887097336,0.421333260395256,0,0,0,0.14084341977668,0,0,0,0,0.506719730950197,0.505524445014783,0,0.258937883647172,0,0,0,0,0,0,0,0,0.144599356919912,0,0.161766849947409,0,0,0,0.292780797011547,0.209446706813455,0.255457055208591,2.27648736561249,2.39961092397363,1.77898317902291,0,0.457500602818626,0.376963056338593,0,0,0,0,0,0.124406970610093,0.252722758433675,0.210441855886474,0.130120442962704,0,0.540186389416048,0.452114453507145,0.136072998302656,0.12811372028485,0,0,0.431135985865684,0.756424320671277,0.175951124163949,0,0,0,1.64625709126355,0,2.80885274925294,2.57347907114715,1.13665399758237,0,0,0,0.23674473558521,0,0,0,0,0.233530684734339,0.16455984991348,0,0,0,0,0,0,0.205809224758569,0,0,0.426576501070468,0.232236671860439,0,0.201683524623343,0.22237804384487,0.190225626112559,0,0.329397909448022,0,0,0,0,0.216138049874694,0,0.189667900953082,0,0,0.407302655690628,0,0,0.0632365371242573,0.295220295959204,0.31399745568275,0.123397163921801,0.592905254174298,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.964887042726734,0,0.37898282354097,0,0,0,0.167506257441816,0,0.195133647857799,0,0,0,0,0,0,0,0,0.491764273019036,0,0.481651769963376,0.234423373184406,0.163934945376675,0.252470927204373,0.631016438832513,1.95219372148319,0.215423397732799,0,0.891194696329576,0.283076530788832,0.404810701674894,0.876767573733936,0.395287777946524,0,0,0,0,0.329940245945071,0,0,0,0.188605079755898,0,0.307435147943927,0,0,0,0,0,0,0.340439605753788,0.18006109403131,0.905510786479282,0.214337035031592,0.177340233642274,0.178368817602071,0.329098041204242,0.608929898229199,0,0.42366414172764,0,0.98931751764888,1.61464426695906,0.904693873922338,0.716234064018819,1.31312719796049,0,0,0,0,0,0,0,0,1.35982743995084,3.07893195112048,1.52019971184866,0,0.158167996790568,0.203319467126849,0.108005340821801,0.627264888043406,1.09181281873089,0.134864346384821,0.165306911450672,0,0.259229946583586,0,1.69107881605257,0.299033092087958,0,0.388902376688095,0.129159823477731,0.337912250981556,0,0.2604087696879,0.104859344425711,0.483168241652012,0,0.948033361884535,0,0.102710957164827,0,0,0.596044064343795,0,0.147689527174577,0.201932899896295,0.228620419965,0.100826185136841,0.292373642219257,0.481059208201647,0.233753804363138,0.453460767230423,0.887943813496259,0.269141569828427,0,0,0,0.183151624267265,1.50057865355346,0,0,0,0,0.171853182343688,0.685082519770642,0,0,0,0,0.51776031175182,0.518936737920883,0,0.682934423016537,0,0,0,0.222246727801615,0.206035057238894,0.320919209591815,1.01078884705519,0.760437899670719,0,0.468207537349412,0,0.17230640686684,0,0.115884325944855,0,0,0.147198920134397,0.342869252385415,0,0.715308569841963,0.145346416632329,0.0941093804153306,0,0,0.263069711437843,0,0,0.237270036248348,0,0,0.154936841185966,0.771626443924566,0,0.233931608445408,0.214871054048298,0.191288332068843,0.220591419119515,0 | |||
|short_description=p1@ENSMUST00000169027 | |||
}} |
Latest revision as of 01:57, 6 August 2015
Short description: | p1@ENSMUST00000169027 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_ENSMUST00000169027_5end |
Coexpression cluster: | MCL_coexpression_mm9:880 |
Association with transcript: | -225bp_to_ENSMUST00000169027_5end |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelium of mucosa | 3.20e-11 | 9 |
gastrointestinal system epithelium | 3.20e-11 | 9 |
intestinal epithelium | 3.20e-11 | 9 |
connective tissue | 1.02e-10 | 46 |
simple columnar epithelium | 5.52e-09 | 11 |
intestinal mucosa | 1.94e-07 | 13 |
wall of intestine | 1.94e-07 | 13 |
gastrointestinal system mucosa | 1.94e-07 | 13 |
Ontology term | p-value | n |
---|---|---|
organ system cancer | 1.25e-08 | 6 |
musculoskeletal system cancer | 9.21e-07 | 3 |
muscle cancer | 9.21e-07 | 3 |