FFCP PHASE1:Hg19::chr7:55433727..55433743,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=55915 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6509 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=-60bp_to_ENST00000452107_5end | |||
|description=CAGE_peak_1_at_LANCL2_5end | |||
|id=chr7:55433727..55433743,+ | |||
|ontology_enrichment_celltype=CL:0002057!3.12e-20!42;CL:0000860!8.92e-20!45;CL:0002009!1.28e-14!65;CL:0002194!1.44e-13!63;CL:0000576!1.44e-13!63;CL:0000040!1.44e-13!63;CL:0000559!1.44e-13!63;CL:0000557!4.72e-13!71;CL:0000839!2.16e-11!70;CL:0002087!1.14e-09!119;CL:0000766!4.62e-09!76;CL:0000738!5.11e-09!140;CL:0002031!8.12e-09!124;CL:0000763!2.65e-08!112;CL:0000049!2.65e-08!112;CL:0000037!3.05e-08!172;CL:0000566!3.05e-08!172;CL:0000988!2.74e-07!182;CL:0002032!4.76e-07!165;CL:0000837!4.76e-07!165;CL:0000048!4.94e-07!430 | |||
|ontology_enrichment_celltype_v019=CL:0000860;3.61e-15;33!CL:0002057;3.61e-15;33!CL:0000576;1.47e-10;48!CL:0000473;1.70e-10;39!CL:0000234;1.70e-10;39 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,3.12e-20,42;CL:0002057,3.12e-20,42;CL:0000473,4.39e-17,48;CL:0000234,4.39e-17,48;CL:0002009,1.77e-15,61;CL:0002194,2.18e-14,59;CL:0000576,2.18e-14,59;CL:0000040,2.18e-14,59;CL:0000559,2.18e-14,59;CL:0000557,9.57e-14,67;CL:0000839,5.33e-12,66;CL:0002087,5.85e-10,115;CL:0000766,1.69e-09,72;CL:0000738,3.04e-09,136;CL:0002031,4.56e-09,120;CL:0000763,1.45e-08,108;CL:0000049,1.45e-08,108;CL:0000037,2.10e-08,168;CL:0000988,2.97e-07,177;CL:0002032,3.41e-07,161;CL:0000837,3.41e-07,161 | |||
|ontology_enrichment_development_v019=CL:0002057;1.22e-14;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!3.25e-11!80;UBERON:0001474!3.79e-09!86;UBERON:0004765!6.17e-09!101;UBERON:0001434!6.17e-09!101;UBERON:0002204!3.41e-07!167;UBERON:0002405!6.28e-07!115 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,9.85e-12,76;UBERON:0001474,1.56e-09,82;UBERON:0001434,9.93e-09,100;UBERON:0002405,2.40e-08,93;UBERON:0004765,2.72e-08,90;UBERON:0002204,6.34e-07,167 | |||
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| |||
|short_description=p1@LANCL2 | |||
}} |
Revision as of 17:05, 22 January 2014
Short description: | p1@LANCL2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_LANCL2_5end |
Coexpression cluster: | NA |
Association with transcript: | -60bp_to_ENST00000452107_5end |
EntrezGene: | LANCL2 |
HGNC: | 6509 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 3.12e-20 | 42 |
CD14-positive, CD16-negative classical monocyte | 3.12e-20 | 42 |
defensive cell | 4.39e-17 | 48 |
phagocyte | 4.39e-17 | 48 |
macrophage dendritic cell progenitor | 1.77e-15 | 61 |
monopoietic cell | 2.18e-14 | 59 |
monocyte | 2.18e-14 | 59 |
monoblast | 2.18e-14 | 59 |
promonocyte | 2.18e-14 | 59 |
granulocyte monocyte progenitor cell | 9.57e-14 | 67 |
myeloid lineage restricted progenitor cell | 5.33e-12 | 66 |
nongranular leukocyte | 5.85e-10 | 115 |
myeloid leukocyte | 1.69e-09 | 72 |
leukocyte | 3.04e-09 | 136 |
hematopoietic lineage restricted progenitor cell | 4.56e-09 | 120 |
myeloid cell | 1.45e-08 | 108 |
common myeloid progenitor | 1.45e-08 | 108 |
hematopoietic stem cell | 2.10e-08 | 168 |
hematopoietic cell | 2.97e-07 | 177 |
hematopoietic oligopotent progenitor cell | 3.41e-07 | 161 |
hematopoietic multipotent progenitor cell | 3.41e-07 | 161 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 9.85e-12 | 76 |
bone element | 1.56e-09 | 82 |
skeletal system | 9.93e-09 | 100 |
immune system | 2.40e-08 | 93 |
skeletal element | 2.72e-08 | 90 |
musculoskeletal system | 6.34e-07 | 167 |