FFCP PHASE1:Hg19::chr8:80992953..80992967,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=7163 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=12005 | |||
|TSSclassifier=strong | |||
|UniProt=F5H0B0,D0UFD4,P55327 | |||
|association_with_transcript=42bp_to_ENST00000537855,NM_001025252,uc003ybr.1,uc010lzr.2_5end | |||
|description=CAGE_peak_23_at_TPD52_5end | |||
|id=chr8:80992953..80992967,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:1000415;7.77e-14;2 | |||
|ontology_enrichment_celltype_v019_2=CL:1000415,7.30e-14,2 | |||
|ontology_enrichment_development_v019=UBERON:0009847;1.14e-09;3!UBERON:0003353;1.14e-09;3 | |||
|ontology_enrichment_disease=DOID:5093!3.57e-19!4;DOID:1612!3.57e-19!4;DOID:178!7.98e-10!1;DOID:326!7.98e-10!1;DOID:3978!7.98e-10!1;DOID:3394!7.98e-10!1;DOID:5844!7.98e-10!1 | |||
|ontology_enrichment_disease_v019=DOID:178;2.16e-26;1!DOID:326;2.16e-26;1!DOID:3978;2.16e-26;1!DOID:3394;2.16e-26;1!DOID:5844;2.16e-26;1!DOID:5093;1.34e-25;4!DOID:1612;1.34e-25;4!DOID:114;6.43e-14;2!DOID:1287;1.31e-07;4 | |||
|ontology_enrichment_disease_v019_2=DOID:178,2.16e-26,1;DOID:326,2.16e-26,1;DOID:3978,2.16e-26,1;DOID:3394,2.16e-26,1;DOID:5844,2.16e-26,1;DOID:5093,1.26e-25,4;DOID:1612,1.26e-25,4;DOID:114,6.43e-14,2;DOID:1287,1.31e-07,4 | |||
|ontology_enrichment_uberon=UBERON:0001905!1.91e-17!2;UBERON:0002757!1.91e-17!2;UBERON:0010134!1.91e-17!2;UBERON:0002784!1.91e-17!2;UBERON:0005408!1.91e-17!2;UBERON:0001899!1.91e-17!2;UBERON:0002110!8.83e-12!3;UBERON:0006242!8.83e-12!3;UBERON:0001154!1.56e-09!1;UBERON:0001153!1.56e-09!1;UBERON:0007023!2.02e-09!115;UBERON:0000989!2.16e-09!1;UBERON:0008811!2.16e-09!1;UBERON:0006258!2.16e-09!1;UBERON:0005876!2.16e-09!1;UBERON:0004874!2.16e-09!1;UBERON:0003296!3.54e-09!4;UBERON:0010133!3.54e-09!4;UBERON:0002336!5.72e-09!1;UBERON:0001018!5.72e-09!1;UBERON:0002473!5.72e-09!1;UBERON:0005340!5.72e-09!1;UBERON:0002316!5.72e-09!1;UBERON:0003544!5.72e-09!1;UBERON:0001020!5.72e-09!1;UBERON:0005970!5.72e-09!1;UBERON:0002437!5.72e-09!1;UBERON:0001155!1.06e-08!9;UBERON:0000310!5.59e-08!10;UBERON:0005409!1.50e-07!35;UBERON:0001443!2.71e-07!11;UBERON:0000059!3.36e-07!11 | |||
|ontology_enrichment_uberon_v019=UBERON:0001905;1.09e-49;2!UBERON:0002757;1.09e-49;2!UBERON:0010134;1.09e-49;2!UBERON:0005408;1.09e-49;2!UBERON:0001899;1.09e-49;2!UBERON:0003296;1.84e-25;4!UBERON:0010133;1.84e-25;4!UBERON:0002784;1.84e-25;4!UBERON:0001894;5.04e-15;7!UBERON:0000310;7.12e-11;10!UBERON:0001443;5.66e-10;11!UBERON:0002110;1.14e-09;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001905,1.80e-49,2;UBERON:0002757,1.80e-49,2;UBERON:0010134,1.80e-49,2;UBERON:0005408,1.80e-49,2;UBERON:0001899,1.80e-49,2;UBERON:0003296,2.36e-25,4;UBERON:0010133,2.36e-25,4;UBERON:0002784,2.36e-25,4;UBERON:0001894,5.81e-15,7;UBERON:0006222,5.81e-15,7;UBERON:0000310,6.94e-11,10;UBERON:0001443,5.54e-10,11;UBERON:0002110,1.10e-09,3;UBERON:0006242,1.10e-09,3 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245976877086227,0,0,0,0,0,0,0,0,0,0,0,0,0,0.790204397959275,1.71697232418975,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.511707249066704,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.828851746593443,0,0,0,0,0,0,0,0,0,0,0,0,0,2.3438498497671,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219385397153973,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.265372693510018,1.83309043480088,0,0,0,0.067401132980677,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.225980740780532,0,0,0,3.32437350649165,0,0.213452994739353,0,0.144090417154106,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.19325901047881,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.434763085832475,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.139879507719444,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205116364240755,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.496211178389294,0,0,1.60710550763486,1.68141861109412,0,0,0,0,0,0,0,0,0,3.13972371402056,0,0,0,0,0,0.0714765441766563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.730336388246517,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.430333232356058,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p23@TPD52 | |||
}} |
Revision as of 22:39, 22 January 2014
Short description: | p23@TPD52 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_23_at_TPD52_5end |
Coexpression cluster: | NA |
Association with transcript: | 42bp_to_ENST00000537855, NM_001025252, uc003ybr.1, uc010lzr.2_5end |
EntrezGene: | TPD52 |
HGNC: | 12005 |
UniProt: | F5H0B0D0UFD4P55327 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of gall bladder | 7.30e-14 | 2 |
Ontology term | p-value | n |
---|---|---|
pineal body | 1.80e-49 | 2 |
regional part of epithalamus | 1.80e-49 | 2 |
secretory circumventricular organ | 1.80e-49 | 2 |
circumventricular organ | 1.80e-49 | 2 |
epithalamus | 1.80e-49 | 2 |
gland of diencephalon | 2.36e-25 | 4 |
neuroendocrine gland | 2.36e-25 | 4 |
regional part of diencephalon | 2.36e-25 | 4 |
diencephalon | 5.81e-15 | 7 |
future diencephalon | 5.81e-15 | 7 |
breast | 6.94e-11 | 10 |
chest | 5.54e-10 | 11 |
gallbladder | 1.10e-09 | 3 |
gall bladder primordium | 1.10e-09 | 3 |
Ontology term | p-value | n |
---|---|---|
vascular disease | 2.16e-26 | 1 |
ischemia | 2.16e-26 | 1 |
extrinsic cardiomyopathy | 2.16e-26 | 1 |
myocardial ischemia | 2.16e-26 | 1 |
myocardial infarction | 2.16e-26 | 1 |
thoracic cancer | 1.26e-25 | 4 |
breast cancer | 1.26e-25 | 4 |
heart disease | 6.43e-14 | 2 |
cardiovascular system disease | 1.31e-07 | 4 |