FFCP PHASE1:Hg19::chr9:124088659..124088698,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=2934 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4620 | |||
|TSSclassifier=strong | |||
|UniProt=Q5T0H8 | |||
|association_with_transcript=-161bp_to_ENST00000373806_5end | |||
|description=CAGE_peak_4_at_GSN_5end | |||
|id=chr9:124088659..124088698,+ | |||
|ontology_enrichment_celltype=CL:0002139!8.04e-12!24;CL:0000115!1.97e-09!35;CL:0000071!1.28e-07!18;CL:0002546!1.28e-07!18;CL:0002078!5.50e-07!44 | |||
|ontology_enrichment_celltype_v019=CL:0002139;8.04e-13;24!CL:0000115;6.93e-12;36!CL:0002138;1.93e-09;6!CL:0000349;3.35e-08;19!CL:0000136;1.61e-07;13!CL:0002078;3.23e-07;45!CL:1000413;5.93e-07;9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000115,1.40e-13,36;CL:0002139,4.57e-13,24;CL:0005020,7.38e-10,6;CL:0002138,7.38e-10,6;CL:0005022,7.38e-10,6;CL:0002078,1.22e-09,45;CL:0000349,2.37e-08,19;CL:1000413,5.80e-07,9 | |||
|ontology_enrichment_development_v019=UBERON:0008947;2.08e-12;29!CL:0005022;1.93e-09;6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000477!1.54e-23!286;UBERON:0007023!6.35e-21!115;UBERON:0004111!3.13e-19!241;UBERON:0000025!8.03e-16!194;UBERON:0000055!2.13e-14!69;UBERON:0004872!1.94e-13!84;UBERON:0000468!4.99e-13!659;UBERON:0001981!2.72e-12!60;UBERON:0007500!2.72e-12!60;UBERON:0004537!2.72e-12!60;UBERON:0006965!2.72e-12!60;UBERON:0000064!2.93e-12!219;UBERON:0000467!5.02e-12!625;UBERON:0000480!6.95e-12!626;UBERON:0002049!9.11e-11!79;UBERON:0007798!9.11e-11!79;UBERON:0001637!1.88e-10!42;UBERON:0003509!1.88e-10!42;UBERON:0004572!1.88e-10!42;UBERON:0001737!4.46e-09!9;UBERON:0004573!1.62e-08!33;UBERON:0004571!1.62e-08!33;UBERON:0005631!1.70e-08!14;UBERON:0000158!1.70e-08!14;UBERON:0001049!1.95e-08!57;UBERON:0005068!1.95e-08!57;UBERON:0006241!1.95e-08!57;UBERON:0007135!1.95e-08!57;UBERON:0003914!3.38e-08!118;UBERON:0001557!5.12e-08!19;UBERON:0000483!6.07e-08!309;UBERON:0000475!6.33e-08!365;UBERON:0000119!9.36e-08!312;UBERON:0001986!1.28e-07!18;UBERON:0004638!1.28e-07!18;UBERON:0004852!1.28e-07!18;UBERON:0001009!1.41e-07!113;UBERON:0003124!4.07e-07!7 | |||
|ontology_enrichment_uberon_v019=UBERON:0001737;3.58e-15;9!UBERON:0001557;3.58e-15;9!UBERON:0005631;8.43e-10;10!UBERON:0000158;8.43e-10;10!UBERON:0000478;1.19e-08;24!UBERON:0004573;7.71e-08;33!UBERON:0004571;7.71e-08;33!UBERON:0001637;9.51e-08;42!UBERON:0003509;9.51e-08;42!UBERON:0004572;9.51e-08;42!UBERON:0000055;3.50e-07;65!UBERON:0003915;5.93e-07;9!UBERON:0004700;5.93e-07;9!UBERON:0001917;5.93e-07;9!UBERON:0001987;6.84e-07;4!UBERON:0002465;7.87e-07;10!UBERON:0001473;8.09e-07;8!UBERON:0004536;8.09e-07;8!UBERON:0006558;8.09e-07;8 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001737,3.71e-15,9;UBERON:0005631,3.89e-15,14;UBERON:0000158,3.89e-15,14;UBERON:0000055,1.01e-14,68;UBERON:0004872,1.61e-12,83;UBERON:0003124,1.27e-11,7;UBERON:0002049,1.30e-11,78;UBERON:0007798,1.30e-11,78;UBERON:0007500,1.04e-10,59;UBERON:0001981,1.04e-10,59;UBERON:0004537,1.04e-10,59;UBERON:0006965,1.04e-10,59;UBERON:0001557,4.22e-10,19;UBERON:0001637,1.32e-09,42;UBERON:0003509,1.32e-09,42;UBERON:0004572,1.32e-09,42;UBERON:0001009,4.63e-09,112;UBERON:0004573,6.58e-09,33;UBERON:0004571,6.58e-09,33;UBERON:0003914,7.30e-09,117;UBERON:0000478,8.80e-09,24;UBERON:0004111,1.03e-08,240;UBERON:0008947,2.51e-08,38;UBERON:0003258,2.51e-08,38;UBERON:0009569,1.40e-07,112;UBERON:0004535,1.83e-07,109;UBERON:0000025,2.33e-07,192;UBERON:0002465,3.11e-07,10;UBERON:0001473,4.06e-07,8;UBERON:0004536,4.06e-07,8;UBERON:0006558,4.06e-07,8;UBERON:0001987,4.17e-07,4;UBERON:0004340,4.17e-07,4;UBERON:0001041,4.36e-07,87;UBERON:0003915,5.80e-07,9;UBERON:0004700,5.80e-07,9;UBERON:0001917,5.80e-07,9;UBERON:0000915,6.20e-07,52 | |||
|phase1_expression=2.90685406832891,1.71280419112787,1.12763523276777,2.00146596706261,0.893922188854576,6.97870819280295,0,0,2.08948502559871,0,0,2.40285509343189,3.9565046734268,0.123766352960047,0.331397375727916,1.34465029290355,0.602694528023977,0.730310090387373,0,0,0,0,0.286235987131057,0,0.125542639594803,0,0,0,0,0,0.309632246632152,0,0.30120591877825,0.369754010166788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12786256184353,0.722878304769133,2.00535164254356,0.579386075843295,0,0,0,0,0.087834785693126,1.76821751921912,0,0,0.324547393654683,0,0,0,0,0,2.38514888840046,2.58070378531837,2.08284300964557,0.56530794192401,1.67799774483962,1.10047216776027,0.417989933073621,1.8089173141853,1.77883131343355,2.67776490211736,9.26507429351038,9.12326526862215,16.5962199132755,2.20597848207521,1.62028389576352,0.803697554556718,0.22452937262617,0.337834441449967,0,0,0.549605231791222,0,0,1.3082821564276,1.49091585508596,1.2663051166458,0.397227542439656,0.286836620748814,0.354668382198357,0,0,0,0,0.269421344139376,0.490385709340376,0,0,0,0,0,0,0,0.161872944368132,0,0.408308342509787,0,0.309977343527296,0,0.989067717114227,0,0,0,0,0,0,1.22595118319608,0.901428353439581,0.453728732640084,0.179389635688862,0.85422955527427,0.423863802319124,0,0.103052529238439,0.257640540045629,0.37223371266318,0,0.487185025805993,0.252433774244115,0.276149695926898,0,0,0.201504196455281,0.508681776931463,0,0.272746120590835,0,0,0,0,0,0,0,0,0,0,0,2.16563844500876,8.99131680302814,8.59781919398319,4.33819853790268,8.71322384585912,10.4582133164355,6.16903609688851,10.2471794201725,10.203516186518,9.61867892365976,0,1.40241773803446,0,0,3.80265104465493,6.87979051674338,5.31710916013264,0,0,0,0,0,0,0,0,0,0,0,0,14.1479118805852,17.5934494779112,15.2203321787679,0,0.858486162094873,0,0,0,0,0,0,0,0.290633938513962,0,0,0,0,0,0,0,0,0,1.71072446022705,0,0,0,0,0,0.07333828582095,0,0,0.845302752556,0,0,0,0,0,0,0,0,0.325736184293735,0,0,0,0,0,0,0,0,0,0,0,0.579125226670317,0.205476322550383,0.358121926479791,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.178428988797162,0.315404830067869,0,0,0,1.03473071292505,0,0,0,0,0,0,0,0,2.42502057157008,9.98612637062982,1.81434175997808,1.73675465473144,0.306923946576125,0.280660094433074,0.896974044789907,1.02341449813341,1.28683136914886,0,0,0,0.246381468041427,0,0.232420756919918,0.120859449591622,0,1.28913384510255,0.114814448164607,0.182091168006717,0.524497659837696,0,0,0,0,0,5.68666920354483,2.2112181685947,1.51141141271498,7.71136263451447,0,0,0,0,0,0,0,0,0,0,7.10982980369284,0,0,0,0,0,0,0,0.15350367472613,0,0,0.290033387828457,0.170453254832202,0,0.330569830721956,0,0,0.6069466851333,1.85938219718914,0,0,0,1.59691809095107,0,1.66791797193528,1.00187420719394,0,0,0,0,0,1.27281299170375,0,0,0,0.117812402345686,1.01091240786658,0,1.68503382495592,0,0.243713489631284,2.11300293513511,0,0,1.13008116620243,0.551365343546124,1.99031692572366,2.19225442626881,0.578775534266688,0,0.202910376962704,0.30982349809975,0,0,0,1.07001315444375,0,0.844430541190656,0.987884678879706,0,0,0,0,0,8.19051066757979,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.270455678475983,0,0,0,2.63714722689409,0,0,0,3.58116727106535,5.64232893582013,3.99308912729002,0.994147647766298,0.703347082052564,0,0,0,1.79323189425963,0.828851746593443,0,0,0,1.24415835064723,0,0.358042349351218,0,0.690503839458535,0,0,0.969332746095218,0.371072392647405,3.99227596002388,0,1.39935999993913,3.62499787717397,0.227586896570999,1.5255219017566,3.54581522651905,0,0,0,0,0.964771509003264,1.52581736317083,0.110579259931225,0.295547618953547,0.438770794307945,12.9636771587598,0.697118721393016,0.923403102045565,0,0.23056390438806,0.538545866458633,0.108647371922008,21.0540765423067,2.56473261525214,28.7838779050063,0,0,0,0,0,0,0,0,0,0,0.141353071433941,0,0,0.973033209536731,2.4441205797345,0,0,0,0.606610196826093,1.60515529459758,1.1713222286267,0,10.5658894223328,0,0.394584402849391,1.20990716048664,0,0.758238955541855,0,0,0,0,0,0,0,0,1.73559738335131,0,0.174118413160805,0.873633341210151,0,0.677294319023596,0.146178634172371,0.164230914106418,1.64881328030313,0,0.90392296312213,0,0,0.443175571691151,2.15106521008283,0.0801588202515337,0.213452994739353,0,0,0,0,0,0,7.77790314235425,0,0,0,0,1.20084057741958,0.958337652243951,0,0,0,1.11712960508902,0.458320848023367,6.46085722119133,4.79229601197579,2.57535628881943,2.00854311697685,1.07493555978762,0,0,0,0,0,0,0,0,1.36203406111576,0,0,0,0.2249738915515,0,0.182248669974074,0.335434687599266,0.315222829196793,0.524545881349981,0,0.35857467866569,0,0,0.662091970365432,0,0,0,0.326587360109409,0,0,0,0,16.1207457045891,0,0.387848869084652,1.3223260174269,1.19760786519031,0,7.36833146717093,8.17462386518263,4.14239055347196,1.9846640872478,0,0,0.638341257770182,0.544017803369474,1.2534494701135,3.06345576763462,1.63936315354902,0,0,0,1.1267183763585,0.573409195690071,0.776503360757966,0.807253238237985,0,0.999843263696853,0,0,0,0,0,0.298509605773748,0,0,0.189403005275089,0.50313580350515,0,1.14420034198462,0,0.466311601748341,1.18284119991707,0,0,0,0,0,0,0,0,0,0,0,0,0,0.800055529326307,0.686791410365586,0.336749488765919,0,0,0,0,0,0,0,0.179088841081487,0,0,0,0,0,0,0,0,0.967809053062115,0,0,0,0,0,0.211312123358627,0,0,0,0,0.184105950251841,0.839277046316667,0.622077260032973,0,0.431299245586727,0,0,0,0,0,0,0.636008701306837,0,0,0,0,0.192687675289379,0,1.11743701340006,0.205116364240755,0,0.553258019713743,0.484426936895553,0,0,2.83127336034577,0,0,0.381382095467167,0,0,0.676892955143315,0,0,4.97622719514703,0.327543835020193,0,0.540300676947157,0.781078098613847,1.03343398250592,0.19024743058172,0.546974809018219,0,0.992422356778588,0.527613733078862,0.511049710558381,0,0,0.606965604236632,0.227662191351298,17.1195574413893,0,0,0.40781839786099,0.394636641377094,0,0,1.56986185701028,0.157115589916002,0,1.82631744101899,0,0,0.643288897589907,0,0,0,0,0,0.3414369541879,0,0,0,0,0.423387050190929,0,0,0,0,0.098150233615243,0,1.29485767437579,1.7452677165562,0,2.4285549652957,0,0,0,0,0,0,0.308696632431779,0.218559560503957,0.470317296361523,0.490296643507811,0,0.981542335574726,0.297046400327086,1.2679671827502,0.509781344063451,1.31577485171795,2.06265241515447,0,6.24938785119802,0,0,0,0.917458566809082,0.573358332605805,0,0.543931921527318,0,1.5870805215462,0,0.462175628631418,0,0.126166424835079,0,0,0,1.06886962106224,0.0918948995348449,0,0.454672189309436,0.267964130156178,0.829169439458779,0.724030971033267,3.41174371041569,1.42838658878244,0.0645889098360061,0.186224142887574,0,1.01835453245064,2.42540626749863,1.52401723527873,2.39563310759697,0.740872583160463,9.53905331722595,1.99596213927608,0.162806537221949,0,0,0,2.34640942403454,0.733448665097199,0.406896178315738,3.99454064511308,0.402547587182052,0 | |||
|short_description=p4@GSN | |||
}} |
Revision as of 03:07, 23 January 2014
Short description: | p4@GSN |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_GSN_5end |
Coexpression cluster: | NA |
Association with transcript: | -161bp_to_ENST00000373806_5end |
EntrezGene: | GSN |
HGNC: | 4620 |
UniProt: | Q5T0H8 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endothelial cell | 1.40e-13 | 36 |
endothelial cell of vascular tree | 4.57e-13 | 24 |
lymphangioblast | 7.38e-10 | 6 |
endothelial cell of lymphatic vessel | 7.38e-10 | 6 |
vascular lymphangioblast | 7.38e-10 | 6 |
meso-epithelial cell | 1.22e-09 | 45 |
extraembryonic cell | 2.37e-08 | 19 |
endothelial cell of artery | 5.80e-07 | 9 |