FFCP PHASE1:Mm9::chr5:96590767..96590793,-: Difference between revisions
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{{FFCP|EntrezGene=231464|HGNC=|MCL_coexpression_id=36|UniProt=F8WJG1,Q8VEG6,D3Z5R3|association_with_transcript=0bp_to_ENSMUST00000036646,ENSMUST00000113005,ENSMUST00000154500,NM_178854,uc008yfe.1,uc008yff.1_5end|description=CAGE_peak_3_at_Cnot6l_5end|id=chr5:96590767..96590793,-|ontology_enrichment_celltype=CL:0000791!2.86e-07!9;CL:0000789!2.86e-07!9;CL:0002420!2.86e-07!9;CL:0002419!2.86e-07!9;CL:0000790!2.86e-07!9;CL:0000838!7.37e-07!12|ontology_enrichment_celltype_v019_2=CL:0000791,9.50e-08,9;CL:0000789,9.50e-08,9;CL:0002420,9.50e-08,9;CL:0002419,9.50e-08,9;CL:0000790,9.50e-08,9;CL:0000838,2.65e-07,12;CL:0000624,4.75e-07,8|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=|ontology_enrichment_uberon_v019_2=UBERON:0000077,8.57e-08,35;UBERON:0002193,2.55e-07,48;UBERON:0002405,2.55e-07,48;UBERON:0003408,5.16e-07,24;UBERON:0004177,5.77e-07,29;UBERON:0005057,5.77e-07,29;UBERON:0002370,7.46e-07,23;UBERON:0000974,7.46e-07,23;UBERON:0004807,7.46e-07,23;UBERON:0005058,7.46e-07,23;UBERON:0003351,7.46e-07,23;UBERON:0009113,7.46e-07,23;UBERON:0003295,7.46e-07,23;UBERON:0009722,7.46e-07,23;UBERON:0005562,7.46e-07,23;UBERON:0007690,7.46e-07,23;UBERON:0002390,7.97e-07,45;UBERON:0003061,7.97e-07,45|phase1_expression=0.960893082628764,0.348975407639361,0,0,0.500895729946347,0.671517087647559,0.467225281191051,4.51931632045517,9.15126693985834,8.89445200023575,10.7867319982068,7.57835510455696,4.79362043807376,4.80812213304486,2.33176833270964,1.01237633694913,2.09868563438444,9.14840279538889,8.22686601634433,3.81950686618227,2.12608225377674,1.29078236561151,1.04479915655574,1.59992422793407,1.14704640533585,0,0.430761996159075,0.215471232685889,0,1.51218077855958,0.665191531965914,0.635030673459631,0.61506478758457,0,0.577703239502549,0.831173226792462,0.612508068787107,2.09265815368454,3.906676722619,3.66466620781659,5.29408339227913,2.73218193983378,3.39857247121808,0,0.608261587317087,0.183546752161682,0,0.218025156380447,0.219686182734472,0,0.139986421625363,0,7.55021727259814,5.80289713609076,7.05796978199174,0.514518872071894,1.14613375975503,0,0,0,0,0,0,0,0,0.7104801149461,0.599200221036809,0,0.207379224616955,0.540023753326763,0.210324961351382,0.571301968807607,0.220868540951614,0.122490799214954,0.191690942036473,0,0,1.53224805702225,1.99688493233117,0.395658863190582,0.914876436024097,0.52091337055676,1.3959149950069,0,1.06958773443767,1.47314292736834,1.70846016958924,0.745597783301202,1.36307147999731,1.13357340160178,1.44932244350839,0.860423876981386,1.3599426674155,1.61910957491345,0,0.448026887097336,0.983110940922263,1.36344258062446,0.519572009205738,1.41335829804136,1.26759077799012,1.28326477414318,0,0,0.432982082022428,0,0,1.48439043634778,10.616453229534,1.7813056687779,0.346970653532272,1.52232739156071,0.691846491768175,0.452167921657868,1.76383060703557,1.50799909595611,0.988779870937496,1.59059292611903,0,2.10296904931632,1.10420759230197,0.969750506270444,0,2.63502717310392,3.14170060220183,1.27728527604296,2.15667224110656,3.59941638596045,2.28726408731516,1.64769703345305,1.37250180845588,0.502617408451458,1.39059456153821,1.79000820131231,0.83115217823824,2.10913641988085,2.44414473240759,1.99051152976149,2.52722758433675,1.89397670297827,0.650602214813519,0.229902104433473,0.540186389416048,0.60281927134286,1.76894897793452,2.0498195245576,1.3118241438362,2.58703370739016,0.646703978798527,1.32374256117473,1.23165786914764,0.657587197282725,1.11218899690239,2.43776516565517,2.05782136407943,0.398068533636986,0.702213187313235,2.83082697826187,3.6941254921427,0.207125772535502,0.938104239924385,1.62055855314913,1.42046841351126,0,0.617068451549513,0.930135779001631,0.268273401399619,1.16765342367169,0.658239399653922,0.492502392237286,0.891756905004413,1.02339991197733,1.09775057645525,0.536825675041487,1.47202963994889,0.823236899034275,0.330418782983798,1.05780226665418,0.639864751605702,0.464473343720877,1.15980715189884,2.01683524623343,1.77902435075896,0.760902504450237,1.89811624617805,1.81168850196412,1.50801125280162,2.98434708061726,1.36474860983384,1.79763881730844,0.864552199498777,1.59313018603494,0.379335801906163,1.25673363870702,4.50830942692322,0.407302655690628,1.74557238450863,1.8936671370386,1.83385957660346,2.50937251565324,1.255989822731,0.987177311374404,0.296452627087149,1.00107063429656,0.982794975566015,2.02375901146368,0.405720242777006,0.72353147925725,1.2731292589071,1.43848068725405,1.78348749452539,1.64736847912849,0,1.11642284300551,2.18426371180192,1.76805214562978,1.07638448113147,1.4473305640901,3.32555742299888,0.757965647081939,0.325929952884052,0.509235257325564,0.469380496577004,1.50755631697634,1.6663054862021,4.68320754858717,3.62560831444239,3.32197034473162,4.14582398509466,2.94953966488328,2.93564469172023,2.89298117163023,4.52373851817817,1.08781136763742,0.983528546038072,2.20749397043786,0.963303539926752,0.468846746368813,2.13115428989678,0.504941854408746,1.26203287766503,0.390438744296638,0.646270193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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:231464 | |||
|HGNC= | |||
|MCL_coexpression_id=36 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:F8WJG1,uniprot:Q8VEG6,uniprot:D3Z5R3 | |||
|association_with_transcript=0bp_to_ENSMUST00000036646,ENSMUST00000113005,ENSMUST00000154500,NM_178854,uc008yfe.1,uc008yff.1_5end | |||
|cluster_id=chr5:96590767..96590793,- | |||
|description=CAGE_peak_3_at_Cnot6l_5end | |||
|id=chr5:96590767..96590793,- | |||
|ontology_enrichment_celltype=CL:0000791!2.86e-07!9;CL:0000789!2.86e-07!9;CL:0002420!2.86e-07!9;CL:0002419!2.86e-07!9;CL:0000790!2.86e-07!9;CL:0000838!7.37e-07!12 | |||
|ontology_enrichment_celltype_v019_2=CL:0000791,9.50e-08,9;CL:0000789,9.50e-08,9;CL:0002420,9.50e-08,9;CL:0002419,9.50e-08,9;CL:0000790,9.50e-08,9;CL:0000838,2.65e-07,12;CL:0000624,4.75e-07,8 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000077,8.57e-08,35;UBERON:0002193,2.55e-07,48;UBERON:0002405,2.55e-07,48;UBERON:0003408,5.16e-07,24;UBERON:0004177,5.77e-07,29;UBERON:0005057,5.77e-07,29;UBERON:0002370,7.46e-07,23;UBERON:0000974,7.46e-07,23;UBERON:0004807,7.46e-07,23;UBERON:0005058,7.46e-07,23;UBERON:0003351,7.46e-07,23;UBERON:0009113,7.46e-07,23;UBERON:0003295,7.46e-07,23;UBERON:0009722,7.46e-07,23;UBERON:0005562,7.46e-07,23;UBERON:0007690,7.46e-07,23;UBERON:0002390,7.97e-07,45;UBERON:0003061,7.97e-07,45 | |||
|phase1_expression=0.960893082628764,0.348975407639361,0,0,0.500895729946347,0.671517087647559,0.467225281191051,4.51931632045517,9.15126693985834,8.89445200023575,10.7867319982068,7.57835510455696,4.79362043807376,4.80812213304486,2.33176833270964,1.01237633694913,2.09868563438444,9.14840279538889,8.22686601634433,3.81950686618227,2.12608225377674,1.29078236561151,1.04479915655574,1.59992422793407,1.14704640533585,0,0.430761996159075,0.215471232685889,0,1.51218077855958,0.665191531965914,0.635030673459631,0.61506478758457,0,0.577703239502549,0.831173226792462,0.612508068787107,2.09265815368454,3.906676722619,3.66466620781659,5.29408339227913,2.73218193983378,3.39857247121808,0,0.608261587317087,0.183546752161682,0,0.218025156380447,0.219686182734472,0,0.139986421625363,0,7.55021727259814,5.80289713609076,7.05796978199174,0.514518872071894,1.14613375975503,0,0,0,0,0,0,0,0,0.7104801149461,0.599200221036809,0,0.207379224616955,0.540023753326763,0.210324961351382,0.571301968807607,0.220868540951614,0.122490799214954,0.191690942036473,0,0,1.53224805702225,1.99688493233117,0.395658863190582,0.914876436024097,0.52091337055676,1.3959149950069,0,1.06958773443767,1.47314292736834,1.70846016958924,0.745597783301202,1.36307147999731,1.13357340160178,1.44932244350839,0.860423876981386,1.3599426674155,1.61910957491345,0,0.448026887097336,0.983110940922263,1.36344258062446,0.519572009205738,1.41335829804136,1.26759077799012,1.28326477414318,0,0,0.432982082022428,0,0,1.48439043634778,10.616453229534,1.7813056687779,0.346970653532272,1.52232739156071,0.691846491768175,0.452167921657868,1.76383060703557,1.50799909595611,0.988779870937496,1.59059292611903,0,2.10296904931632,1.10420759230197,0.969750506270444,0,2.63502717310392,3.14170060220183,1.27728527604296,2.15667224110656,3.59941638596045,2.28726408731516,1.64769703345305,1.37250180845588,0.502617408451458,1.39059456153821,1.79000820131231,0.83115217823824,2.10913641988085,2.44414473240759,1.99051152976149,2.52722758433675,1.89397670297827,0.650602214813519,0.229902104433473,0.540186389416048,0.60281927134286,1.76894897793452,2.0498195245576,1.3118241438362,2.58703370739016,0.646703978798527,1.32374256117473,1.23165786914764,0.657587197282725,1.11218899690239,2.43776516565517,2.05782136407943,0.398068533636986,0.702213187313235,2.83082697826187,3.6941254921427,0.207125772535502,0.938104239924385,1.62055855314913,1.42046841351126,0,0.617068451549513,0.930135779001631,0.268273401399619,1.16765342367169,0.658239399653922,0.492502392237286,0.891756905004413,1.02339991197733,1.09775057645525,0.536825675041487,1.47202963994889,0.823236899034275,0.330418782983798,1.05780226665418,0.639864751605702,0.464473343720877,1.15980715189884,2.01683524623343,1.77902435075896,0.760902504450237,1.89811624617805,1.81168850196412,1.50801125280162,2.98434708061726,1.36474860983384,1.79763881730844,0.864552199498777,1.59313018603494,0.379335801906163,1.25673363870702,4.50830942692322,0.407302655690628,1.74557238450863,1.8936671370386,1.83385957660346,2.50937251565324,1.255989822731,0.987177311374404,0.296452627087149,1.00107063429656,0.982794975566015,2.02375901146368,0.405720242777006,0.72353147925725,1.2731292589071,1.43848068725405,1.78348749452539,1.64736847912849,0,1.11642284300551,2.18426371180192,1.76805214562978,1.07638448113147,1.4473305640901,3.32555742299888,0.757965647081939,0.325929952884052,0.509235257325564,0.469380496577004,1.50755631697634,1.6663054862021,4.68320754858717,3.62560831444239,3.32197034473162,4.14582398509466,2.94953966488328,2.93564469172023,2.89298117163023,4.52373851817817,1.08781136763742,0.983528546038072,2.20749397043786,0.963303539926752,0.468846746368813,2.13115428989678,0.504941854408746,1.26203287766503,0.390438744296638,0.646270193198397,0.477937595905104,0.668396022247182,0.849229592366497,0.809621403349789,0.292255857911312,0.395287777946524,4.4984984299053,1.84522110770749,0.534196811001766,3.09485222771795,2.3095817216155,0,0.728341908464944,0.604647113929502,0.754420319023592,0.590603785761546,0.922305443831782,2.32585463851399,1.81766864738753,1.78248689192361,1.26414703174326,0,2.06271086496374,3.40439605753788,0.720244376125241,0,1.28602221018955,1.41872186913819,1.78368817602071,1.31639216481697,2.13125464380219,3.75474732901937,0.42366414172764,2.42581237860458,1.97863503529776,3.55221738730992,3.07595917133595,2.86493625607528,2.9545361954111,0.874442509889552,1.48340241608408,2.22132145037209,0.412773735926445,0.925972636848558,2.82552685507037,2.32380187125743,3.20289442489132,4.9293744698218,4.47844647435706,4.83699908315483,0.954670618015114,0.790839983952838,3.25311147402958,1.29606408986162,1.25452977608681,1.31017538247707,1.75323650300267,1.90102948168273,2.09404753587224,1.94422459937689,1.86401793926078,0.56369293868419,1.04661582230785,0.992750942742586,1.55560950675238,0.774958940866387,1.520605129417,3.0512882047896,2.21347454234715,2.30690557736564,2.17425708743405,1.44015003128933,3.47612232690996,0.608175645870493,0.924398614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| |||
|short_description=p3@Cnot6l | |||
}} |
Revision as of 20:02, 4 August 2015
Short description: | p3@Cnot6l |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Cnot6l_5end |
Coexpression cluster: | MCL_coexpression_mm9:36 |
Association with transcript: | 0bp_to_ENSMUST00000036646, ENSMUST00000113005, ENSMUST00000154500, NM_178854, uc008yfe.1, uc008yff.1_5end |
EntrezGene: | 231464 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mature alpha-beta T cell | 9.50e-08 | 9 |
alpha-beta T cell | 9.50e-08 | 9 |
immature T cell | 9.50e-08 | 9 |
mature T cell | 9.50e-08 | 9 |
immature alpha-beta T cell | 9.50e-08 | 9 |
lymphoid lineage restricted progenitor cell | 2.65e-07 | 12 |
CD4-positive, alpha-beta T cell | 4.75e-07 | 8 |
Ontology term | p-value | n |
---|---|---|
mixed endoderm/mesoderm-derived structure | 8.57e-08 | 35 |
hemolymphoid system | 2.55e-07 | 48 |
immune system | 2.55e-07 | 48 |
gland of gut | 5.16e-07 | 24 |
hemopoietic organ | 5.77e-07 | 29 |
immune organ | 5.77e-07 | 29 |
thymus | 7.46e-07 | 23 |
neck | 7.46e-07 | 23 |
respiratory system epithelium | 7.46e-07 | 23 |
hemolymphoid system gland | 7.46e-07 | 23 |
pharyngeal epithelium | 7.46e-07 | 23 |
thymic region | 7.46e-07 | 23 |
pharyngeal gland | 7.46e-07 | 23 |
entire pharyngeal arch endoderm | 7.46e-07 | 23 |
thymus primordium | 7.46e-07 | 23 |
early pharyngeal endoderm | 7.46e-07 | 23 |
hematopoietic system | 7.97e-07 | 45 |
blood island | 7.97e-07 | 45 |