FFCP PHASE1:Hg19::chrX:152912616..152912667,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=1852 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=3076 | |||
|TSSclassifier=strong | |||
|UniProt=Q99956 | |||
|association_with_transcript=0bp_to_ENST00000342782,uc004fhy.3_5end | |||
|coexpression_cluster_id=C55 | |||
|description=CAGE_peak_1_at_DUSP9_5end | |||
|id=chrX:152912616..152912667,+ | |||
|ontology_enrichment_celltype=CL:0000066!1.54e-35!254;CL:0000223!3.95e-14!59;CL:0002076!1.84e-12!43;CL:0002321!3.16e-08!248;CL:0000220!8.91e-08!246;CL:0002251!8.80e-07!21 | |||
|ontology_enrichment_celltype_v019=CL:1000507;1.16e-07;10!CL:1000494;1.16e-07;10!CL:1000449;4.90e-07;15 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,1.41e-24,253;CL:0000223,7.77e-10,58;CL:0002076,2.57e-08,42;CL:1000507,1.21e-07,10;CL:1000494,1.21e-07,10;CL:1000449,5.75e-07,15 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:0050687!5.90e-23!143;DOID:305!2.48e-21!106;DOID:162!8.41e-20!235;DOID:14566!5.61e-19!239;DOID:1749!1.05e-07!14 | |||
|ontology_enrichment_disease_v019=DOID:1749;7.32e-09;14 | |||
|ontology_enrichment_disease_v019_2=DOID:0050687,8.61e-21,143;DOID:162,6.11e-20,235;DOID:14566,4.77e-19,239;DOID:305,2.81e-18,106;DOID:1749,7.49e-09,14;DOID:7,1.43e-07,39 | |||
|ontology_enrichment_uberon=UBERON:0004119!2.12e-13!169;UBERON:0000925!2.12e-13!169;UBERON:0006595!2.12e-13!169;UBERON:0001007!6.01e-10!155;UBERON:0001555!6.01e-10!155;UBERON:0007026!6.01e-10!155;UBERON:0004921!1.26e-09!129;UBERON:0004185!1.26e-09!129;UBERON:0005177!1.36e-09!107;UBERON:0000077!2.09e-09!130;UBERON:0008947!5.76e-09!38;UBERON:0003258!5.76e-09!38;UBERON:0006554!1.26e-08!44;UBERON:0001737!2.50e-08!9;UBERON:0001008!3.30e-08!45;UBERON:0001041!9.18e-08!98;UBERON:0000065!1.23e-07!53;UBERON:0001004!2.75e-07!72;UBERON:0005911!2.84e-07!82;UBERON:0000072!5.23e-07!46;UBERON:0000466!5.81e-07!126;UBERON:0003104!5.91e-07!238;UBERON:0009142!5.91e-07!238 | |||
|ontology_enrichment_uberon_v019=UBERON:0001737;2.87e-13;9!UBERON:0001557;2.87e-13;9!UBERON:0002113;5.09e-08;24!UBERON:0011143;5.09e-08;24!UBERON:0006554;9.46e-08;30!UBERON:0001008;9.46e-08;30!UBERON:0004211;1.16e-07;10!UBERON:0009773;1.16e-07;10!UBERON:0001231;1.16e-07;10!UBERON:0004810;1.16e-07;10!UBERON:0000485;1.24e-07;7!UBERON:0000072;3.98e-07;37!UBERON:0006555;4.90e-07;15!UBERON:0004819;4.90e-07;15!UBERON:0001285;4.90e-07;15!UBERON:0007684;4.90e-07;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001737,2.40e-13,9;UBERON:0006554,1.54e-08,47;UBERON:0001008,3.04e-08,48;UBERON:0005177,6.39e-08,101;UBERON:0003124,6.83e-08,7;UBERON:0004810,1.21e-07,10;UBERON:0004119,2.01e-07,160;UBERON:0000925,2.01e-07,160;UBERON:0006595,2.01e-07,160;UBERON:0008947,2.23e-07,38;UBERON:0003258,2.23e-07,38;UBERON:0005172,2.58e-07,54;UBERON:0005173,2.58e-07,54;UBERON:0002113,4.73e-07,26;UBERON:0003918,4.73e-07,26;UBERON:0011143,4.73e-07,26;UBERON:0005095,4.73e-07,26;UBERON:0007687,4.73e-07,26;UBERON:0004211,5.75e-07,15;UBERON:0009773,5.75e-07,15;UBERON:0001231,5.75e-07,15;UBERON:0001285,5.75e-07,15;UBERON:0007684,5.75e-07,15;UBERON:0004208,5.75e-07,15 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0.245733936501509,1.39560233594486,0,0,0.123766352960047,0.662794751455832,0,0,0,0,0.246242116153576,0.204000691244253,0,0,0,0.125542639594803,0,0,0,0,0,0.154816123316076,6.43594857135249,2.10844143144775,2.21852406100073,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199463657621632,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.383587685530591,0,0,0.144846518960824,0,0,0.0945348171640679,0.221729397462564,0.263504357079378,8.8410875960956,1.45718115317017,1.11235332835329,0,0,0,0,0,0,0,0,0,0,0,0.275118041940067,0,0,0,0,0,0,0,0.735326160691737,0,0,0,0,0,0,0.366403487860815,0,0,3.92484646928281,0,0,0,0,0,0,0,0,0,0,0.163461903113459,0,0,0,0,0,0,0.117434498643765,0.161872944368132,0.140450806702248,0,0.245668634623536,0,0,0,0,0,0,0.250237039743928,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.57978255948989,0.272746120590835,0.860413786167011,1.58565817968474,0.662648841607426,4.18298194330266,2.798848485415,2.77552935963191,0.36497735907583,0,0,0,0,0,3.785817601275,4.55178663210875,3.37415441836875,4.52205288202815,4.35758888184812,5.93176547777742,4.85392709376592,6.08286541888573,4.61696588335668,0,1.40241773803446,0,0,0,0.982827216677626,0,0,7.37930631258681,0.514703430895577,0.768251997860379,2.24803506515239,1.60846355858609,1.574003567695,0,0,0,0.115930404975077,0.117408694235822,0,0,0,1.58040879591855,0,0,0,0.148631162288728,0.93733833986777,0.335964256397719,0.283550194484773,0.179117045405697,0,0.383382679165211,0,0,0,0,0,0.825472625798197,1.90994212779139,0,1.71072446022705,1.95372236136315,1.8020583470635,0.285826432630578,0,0.43596006883328,0,0.129271715757778,0,0,0,0,0.257207374262142,1.41849132023278,0,0,3.7983512377401,0.823240336780769,0.325736184293735,0,0,0,0,0.099972991182057,0,0,0,0,0,0,0,0.205476322550383,0,0,0,0,0,0,0,0,0,0,0,0,0,0.36807447515742,0,0,0,0.178428988797162,0,0,0,0,0,0.664225598535437,0,0,0.195801157462741,0,0,0,0,0,3.32870879020994,1.5119514666484,0,0,0,0,0,0,0,0,0,0,0,0,7.85586422345544,0.40101294060657,0.276242966807689,0,0,0.131124414959424,2.25599806453706,1.92538342761037,3.92174884588428,2.92278449306521,0.422206515571503,0,0,1.0795795805107,0,0,1.00337954770971,2.03901018436031,9.14183609821597,1.34324852833307,0,0,2.05160100093111,0,0,15.8683157937492,0.0915694648183434,0.165018999841176,2.29706215198469,0,0,0,0,0,0.137836572484531,0,0.145016693914229,0.0852266274161009,0,0.826424576804891,1.53752053892085,0.127612712494584,2.023155617111,0.464845549297286,0,0,0,0,0,0,0,0,0,0.190630193923825,0,0,0,0,0.179872457583315,0,0.117812402345686,0,0,0,0.975267478179181,0,0,0.409499734223957,0,0,0,0,0,0,0,0.202910376962704,0,0.281695602532241,0.286822704408103,0.294747123039363,0.35667105148125,0,0,0,0.75894634753143,0,0.384888450902048,2.68120910214315,4.3556393944529,17.1341717413738,0.86101074534246,1.68471475667626,2.21715076768338,0.918893600827838,0,0,0,0,0,0,0,0,0,0,10.7817695031654,0,0,0,1.27541018183058,0.199579371432817,0,0,3.89546328329467,0,0,0,0,0,0,0,0.425846237690326,1.03051603426729,10.1389452221791,8.05233988412697,6.17341824334061,0.586164286206121,0,0,0,0,0,0,0,0,0,0,2.3874448473769,0.296964680832639,0,0,0,0.222617410045812,0,1.26675244876796,0,0,1.0077309914171,0,0,0,0.179736702294654,0.179021174675609,0,0.197286811273867,0,0,0,0,0,1.04171104434093,0,0,9.78623655255297,1.5255219017566,4.49136595359079,1.03423011972439,0,0.347249989866585,0,0.120596438625408,0,0,0,0,1.41620002574687,0,0.153900517007594,0,3.22789466143284,6.55230804191337,19.8824690617275,9.57003479195758,4.48828207669125,6.39641731222362,0,4.39544717906069,0,7.44465680036696,7.64643883839184,4.6990044353236,0.948768663620925,0,0.843992258112108,1.79556088975062,2.26164914294305,9.52110014865201,0,0,0,0,0,0,0,0,0,0,0.978323094660449,1.21390189767046,0,0,0,0.189559738885464,0.450970258243478,1.24425829676697,3.32326936353593,3.64091151463049,3.7671950208867,0,1.13843818411917,0.138674673013139,0.347119476670262,2.84177952501695,2.69883540399248,0.34945333648406,0,3.96700958285249,3.14284063470598,3.20250282507516,0,2.20640316728751,0,0,1.9871461170299,0,12.7108398777622,0,0,0.799238438328521,0.288180834308212,0,0.171594997861965,0,0,12.2560898000734,1.08723364858891,0.523014231561666,0.815985741090574,0,0.600420288709789,0.273810757783986,0,0.429765441419957,0,0,0,0,7.18844401796368,0,0,0,0,17.4743924291181,136.21612220919,133.51369057749,127.190487252847,0.196854963029498,0,0,0.136203406111576,0.803765742325096,1.37539436597234,0.83088067605837,0,0,0,3.68978156359193,19.9378439466971,30.7908432352439,0.211200673038813,0.179287339332845,0,0,0,1.27134268827375,0,0,0,0,0.985110248992068,0,1.69968137280189,0.879313402068495,123.231406688366,0.258565912723101,0.13223260174269,0.855434189421647,0,0.106787412567695,0,0,0,0.197611631897944,0,0.638341257770182,0,0.2506898940227,0,0,0,0,0,0.1251909307065,0,0,0,1.24513771442608,2.62458856720424,0.303298235083296,3.71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| |||
|short_description=p1@DUSP9 | |||
}} |
Revision as of 07:26, 23 January 2014
Short description: | p1@DUSP9 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_DUSP9_5end |
Coexpression cluster: | C55_hepatocellular_Intestinal_liver_Prostate_fibrosarcoma_Hepatocyte_hepatoblastoma |
Association with transcript: | 0bp_to_ENST00000342782, uc004fhy.3_5end |
EntrezGene: | DUSP9 |
HGNC: | 3076 |
UniProt: | Q99956 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 1.41e-24 | 253 |
endodermal cell | 7.77e-10 | 58 |
endo-epithelial cell | 2.57e-08 | 42 |
kidney tubule cell | 1.21e-07 | 10 |
nephron tubule epithelial cell | 1.21e-07 | 10 |
epithelial cell of nephron | 5.75e-07 | 15 |
Ontology term | p-value | n |
---|---|---|
larynx | 2.40e-13 | 9 |
urinary system structure | 1.54e-08 | 47 |
renal system | 3.04e-08 | 48 |
trunk region element | 6.39e-08 | 101 |
chorion | 6.83e-08 | 7 |
nephron tubule epithelium | 1.21e-07 | 10 |
endoderm-derived structure | 2.01e-07 | 160 |
endoderm | 2.01e-07 | 160 |
presumptive endoderm | 2.01e-07 | 160 |
respiratory primordium | 2.23e-07 | 38 |
endoderm of foregut | 2.23e-07 | 38 |
abdomen element | 2.58e-07 | 54 |
abdominal segment element | 2.58e-07 | 54 |
kidney | 4.73e-07 | 26 |
kidney mesenchyme | 4.73e-07 | 26 |
upper urinary tract | 4.73e-07 | 26 |
kidney rudiment | 4.73e-07 | 26 |
kidney field | 4.73e-07 | 26 |
nephron epithelium | 5.75e-07 | 15 |
renal tubule | 5.75e-07 | 15 |
nephron tubule | 5.75e-07 | 15 |
nephron | 5.75e-07 | 15 |
uriniferous tubule | 5.75e-07 | 15 |
nephrogenic mesenchyme | 5.75e-07 | 15 |
Ontology term | p-value | n |
---|---|---|
cell type cancer | 8.61e-21 | 143 |
cancer | 6.11e-20 | 235 |
disease of cellular proliferation | 4.77e-19 | 239 |
carcinoma | 2.81e-18 | 106 |
squamous cell carcinoma | 7.49e-09 | 14 |
disease of anatomical entity | 1.43e-07 | 39 |