FFCP PHASE1:Hg19::chrX:16141667..16141707,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=2925 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4609 | |||
|TSSclassifier=strong | |||
|UniProt=P30550 | |||
|association_with_transcript=0bp_to_ENST00000380289_5end | |||
|coexpression_cluster_id=C130 | |||
|description=CAGE_peak_1_at_GRPR_5end | |||
|id=chrX:16141667..16141707,+ | |||
|ontology_enrichment_celltype=CL:0002319!4.83e-11!25;CL:0002620!9.56e-11!23;CL:0000047!7.57e-09!8;CL:0000540!1.64e-07!6;CL:0000031!1.64e-07!6;CL:0000404!1.64e-07!6;CL:0002322!4.37e-07!5;CL:0000133!7.08e-07!59 | |||
|ontology_enrichment_celltype_v019=CL:0002322;2.33e-15;5!CL:0002620;3.98e-13;23!CL:0002605;1.56e-09;3!CL:0002319;2.35e-07;25 | |||
|ontology_enrichment_celltype_v019_2=CL:0002322,1.99e-15,5;CL:0002620,3.92e-13,23;CL:0002605,1.35e-09,3;CL:0002319,2.37e-07,25 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:17!5.16e-07!5;DOID:450!5.16e-07!5;DOID:66!5.16e-07!5;DOID:423!5.16e-07!5;DOID:0080000!5.16e-07!5;DOID:11722!5.16e-07!5 | |||
|ontology_enrichment_disease_v019=DOID:17;5.11e-15;5!DOID:450;5.11e-15;5!DOID:66;5.11e-15;5!DOID:423;5.11e-15;5!DOID:0080000;5.11e-15;5!DOID:11722;5.11e-15;5 | |||
|ontology_enrichment_disease_v019_2=DOID:17,3.02e-15,5;DOID:450,3.02e-15,5;DOID:66,3.02e-15,5;DOID:423,3.02e-15,5;DOID:0080000,3.02e-15,5;DOID:11722,3.02e-15,5;DOID:7,4.16e-07,39 | |||
|ontology_enrichment_uberon=UBERON:0005743!1.27e-22!86;UBERON:0001017!2.95e-22!82;UBERON:0000073!2.50e-20!94;UBERON:0001016!2.50e-20!94;UBERON:0000956!7.19e-18!25;UBERON:0000203!7.19e-18!25;UBERON:0003056!6.78e-17!61;UBERON:0001869!1.54e-16!32;UBERON:0001049!1.94e-16!57;UBERON:0005068!1.94e-16!57;UBERON:0006241!1.94e-16!57;UBERON:0007135!1.94e-16!57;UBERON:0001893!3.06e-16!34;UBERON:0003080!5.46e-16!42;UBERON:0002791!2.09e-15!33;UBERON:0002780!3.53e-15!41;UBERON:0001890!3.53e-15!41;UBERON:0006240!3.53e-15!41;UBERON:0002020!5.34e-15!34;UBERON:0003528!5.34e-15!34;UBERON:0003075!6.27e-15!86;UBERON:0007284!6.27e-15!86;UBERON:0002619!7.10e-15!22;UBERON:0000955!1.06e-14!69;UBERON:0006238!1.06e-14!69;UBERON:0002346!1.30e-13!90;UBERON:0000033!2.95e-13!123;UBERON:0001950!3.55e-13!20;UBERON:0004121!9.41e-13!169;UBERON:0002616!1.55e-12!59;UBERON:0000153!1.68e-12!129;UBERON:0007811!1.68e-12!129;UBERON:0000924!5.36e-12!173;UBERON:0006601!5.36e-12!173;UBERON:0007023!1.49e-08!115;UBERON:0000475!1.03e-07!365 | |||
|ontology_enrichment_uberon_v019=UBERON:0000349;2.08e-09;5!UBERON:0001869;2.85e-09;32!UBERON:0000956;4.50e-09;25!UBERON:0000203;4.50e-09;25!UBERON:0001893;2.80e-08;34!UBERON:0002791;2.86e-08;32!UBERON:0003528;1.29e-07;34!UBERON:0002020;1.29e-07;34 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001869,8.71e-10,32;UBERON:0000349,2.23e-09,5;UBERON:0000956,3.65e-09,25;UBERON:0000203,3.65e-09,25;UBERON:0001893,4.42e-09,34;UBERON:0002791,3.33e-08,32;UBERON:0003056,6.54e-08,61;UBERON:0003528,1.31e-07,34;UBERON:0002020,1.31e-07,34;UBERON:0002780,3.72e-07,41;UBERON:0001890,3.72e-07,41;UBERON:0003080,3.72e-07,41;UBERON:0006240,3.72e-07,41;UBERON:0001017,7.10e-07,81;UBERON:0001876,9.36e-07,2 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.602694528023977,0,0,0,0,0,2.0036519099174,6.02247470320691,1.75759695432724,0.458480434487708,0.738905305049512,0.314843125254717,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.145398238779565,0,0,0,0,0,0,0,0,0,0,0,0,0,0.224723484445085,0,0,0,0,0,0,0.290209238628584,0,0,0,0,0,0.605399502633369,0,0,0,0,0,0.112328631146495,0.150176892841506,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127986611154418,0,0,0,0,0,0,0,0,0,0.361439152384566,0,0,0,0,1.60709189178915,0.665188192387692,0.351339142772504,0.392937226493138,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.25326102332916,0,0,0,0.560677600142307,0,0.24666754841716,0,0.269421344139376,0,0,0,0,0,0,0,0.23486899728753,0,0,0,0.491337269247072,0,0,0,0,0,0.168336113954066,0.250237039743928,0,3.07284334616587,3.0648779579902,0,0,1.97328599257748,2.77624605464138,9.32500365102072,5.40163972951924,2.57631323096097,2.31876486041066,2.41951913231067,1.18143432568886,0.68205903612839,0.504867548488229,6.71964260088785,0,1.42003837006646,0.604512589365842,0.339121184620975,0,0,0,10.6117124332748,8.74696470921803,3.02104251460748,1.65857688024593,3.78481276313443,75.185335969621,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.343135620597051,0,0,0,0,0,1.03993478527958,2.88662684050547,4.05756417412769,0,0,0,0,0,0,0,0,0.297262324577456,0,0,0.567100388969546,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.1466765716419,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.67737398844108,0,1.42636905040718,0,0,0,0,0,0,0,0.254094624222463,1.30139853857622,0.773288812777695,0.837581326671744,0.637938751653163,0,0,0,0,0,0.271265023699736,0,0.713715955188647,0,0,0,0,0,0,0,0,0,0,0,0,0.106727557803444,0,0,0,0,0,0.280660094433074,0,0,0,0,0.462629081407967,0,1.64254312027618,0,0.697262270759755,0,0,0,0,0,0.131124414959424,0,0.15403067420883,0.784349769176855,0,0.211103257785751,0,0,0,0,0,0,0,0,0.447749509444357,0,0,0.512900250232778,0,0,0.103041011647722,0,0,0,0,0,0.773365746336976,0,0,0.275673144969061,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117812402345686,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.6196469961995,0,0.860468113224309,0.0982490410131212,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.9882952955326,2.11004124615769,0,0,0,0,2.48655523978033,5.03865495708552,0.511343412510774,0,0,3.23526064130377,0,0,0.0986434056369336,0,0,0,0.556608588971108,0,0.260427761085233,0.0874599999961957,1.44999915086959,0,0,0,0,0,0,0,0.241192877250816,0,0.110579259931225,0,0.658156191461918,0,0,2.00070672109872,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,16.8783138998831,1.99052386215701,0.796118080530053,1.22206028986725,0,0.123563938946503,0.104421949505455,0.202203398942031,0,0,0,0,0,0.789168805698781,2.41981432097328,0,0,0,0,0,0,0,0,0,0.277349346026277,0,0,0,0.34945333648406,20.2943518316508,0,0,0,3.87956065953678,0.0882561266915003,1.35588444468319,0,0,1.70939149080872,0,0,0,0,0,0.687219576995494,5.3194449337209,0,0,0,1.49494626680975,1.15063130943567,0.305994652908965,0,0,0,0,0,0.262887354279314,0,0,0,0,0,0,0.470284307407084,0,0,0,0,0,0,3.13291328643403,3.18091875923721,0.544813624446302,20.8979093004525,71.795585903756,79.3491045635744,0,0,1.76173714308272,0,0,0.104909176269996,0.528001682597033,0,0.191915197319445,0,0,0.25426853765475,0,0,0.653174720218818,0,0,0,0,0,0,0,0.79339561045614,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.886068179966986,0.732157589411779,0.751145584238999,0,0.332787154610557,0.310482014706917,0.276697269872462,0.124980407962107,0,0,0,0.936669811613763,0.144921028610825,0,0,0,0,0,0,0,0,0,0,0.318593534327405,0,0,0.414706207840855,0,0,0,0,0,0,0,0,0,0,0.343395705182793,0.336749488765919,0,0,0,0,0,0,0,4.83539870920016,2.77921302444875,0,0.883445729729405,0,0,0,0.345430341731199,0,0.414775308455192,0,0,0,0,0,0,0,0,0,0.567515953566836,1.10463570151104,0,0,0,0.107824811396682,0,0,0,0,0,0,0,0,0,0.705351887381368,0.3062454773532,1.02766760154335,0,0.478901577171454,0.41023272848151,0,0.829887029570615,1.13032951942296,0,0.0981477185010256,0,0,0,0,0,0,0,0,5.47059807863165,0,0.982631505060581,1.03499260351932,1.2156765231311,0.781078098613847,0.826747186004736,1.01465296310251,0.546974809018219,0,0,0,0,0.535701835878287,0.336283722218824,0,0,0,0.345701962667338,1.02892805662451,0.0679697329768317,0.920818829879887,2.12748913591143,34.2592717827573,0.156986185701028,0,0,0,16.1945693413966,0.9555033757741,0.857718530119876,0,0,0,0,0,0,0,0,0,0.0852134047591577,0.423387050190929,0.22910686854405,0,0,0.111855431797792,0,0,0,0,0,0.485710993059139,0,0.795803100645473,0,0,0,0,0.308696632431779,0.218559560503957,0,0.245148321753905,0,0.392616934229891,0.297046400327086,0.8453114551668,0,0,0,0,0,0.352894871715692,0,0,0,0,0,0.611923411718232,0,1.5870805215462,0,0,0.432626562123789,9.46248186263092,0.109265571963696,10.7693725859721,0.203977659483963,0,0,0,0,0,0,0.103432995861895,0,0.476128862927481,0,0,0.672791175483681,0,0.202117188958219,0,0,0,0,0,0,0.106727345877715,0,0,0,0.488965776731466,1.22068853494722,0,0,0.320568492303233 | |||
|short_description=p1@GRPR | |||
}} |
Revision as of 04:56, 23 January 2014
Short description: | p1@GRPR |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_GRPR_5end |
Coexpression cluster: | C130_iPS_HES3GFP_H9_teratocarcinoma_testicular_colon_Alveolar |
Association with transcript: | 0bp_to_ENST00000380289_5end |
EntrezGene: | GRPR |
HGNC: | 4609 |
UniProt: | P30550 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic stem cell | 1.99e-15 | 5 |
skin fibroblast | 3.92e-13 | 23 |
astrocyte of the cerebral cortex | 1.35e-09 | 3 |
neural cell | 2.37e-07 | 25 |
Ontology term | p-value | n |
---|---|---|
cerebral hemisphere | 8.71e-10 | 32 |
limbic system | 2.23e-09 | 5 |
cerebral cortex | 3.65e-09 | 25 |
pallium | 3.65e-09 | 25 |
telencephalon | 4.42e-09 | 34 |
regional part of telencephalon | 3.33e-08 | 32 |
pre-chordal neural plate | 6.54e-08 | 61 |
brain grey matter | 1.31e-07 | 34 |
gray matter | 1.31e-07 | 34 |
regional part of forebrain | 3.72e-07 | 41 |
forebrain | 3.72e-07 | 41 |
anterior neural tube | 3.72e-07 | 41 |
future forebrain | 3.72e-07 | 41 |
central nervous system | 7.10e-07 | 81 |
amygdala | 9.36e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system disease | 3.02e-15 | 5 |
myotonic disease | 3.02e-15 | 5 |
muscle tissue disease | 3.02e-15 | 5 |
myopathy | 3.02e-15 | 5 |
muscular disease | 3.02e-15 | 5 |
myotonic dystrophy | 3.02e-15 | 5 |
disease of anatomical entity | 4.16e-07 | 39 |