Personal tools

FFCP PHASE1:Mm9::chr8:94325446..94325459,-: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
No edit summary
Line 1: Line 1:
{{FFCP|EntrezGene=16373|HGNC=|MCL_coexpression_id=1211|UniProt=P81067|association_with_transcript=93bp_to_ENSMUST00000093312,NM_001253822,NM_008393_5end|description=CAGE_peak_8_at_Irx3_5end|id=chr8:94325446..94325459,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0005178!2.56e-11!17;UBERON:0005181!2.56e-11!17;UBERON:0002224!2.56e-11!17;UBERON:0000915!2.56e-11!17;UBERON:0008947!2.56e-11!17;UBERON:0003258!2.56e-11!17;UBERON:0005153!1.07e-10!17;UBERON:0002048!8.29e-10!14;UBERON:0000117!8.29e-10!14;UBERON:0000171!8.29e-10!14;UBERON:0000170!8.29e-10!14;UBERON:0005597!8.29e-10!14;UBERON:0000118!8.29e-10!14;UBERON:0005157!2.28e-09!27|ontology_enrichment_uberon_v019_2=UBERON:0005178,5.93e-18,17;UBERON:0005181,5.93e-18,17;UBERON:0002224,5.93e-18,17;UBERON:0000915,5.93e-18,17;UBERON:0008947,5.93e-18,17;UBERON:0003258,5.93e-18,17;UBERON:0005153,5.16e-16,17;UBERON:0002048,8.77e-15,14;UBERON:0000117,8.77e-15,14;UBERON:0000171,8.77e-15,14;UBERON:0000170,8.77e-15,14;UBERON:0005597,8.77e-15,14;UBERON:0000118,8.77e-15,14;UBERON:0005157,5.17e-13,20;UBERON:0009569,1.43e-11,66;UBERON:0002113,1.17e-09,14;UBERON:0003918,1.17e-09,14;UBERON:0011143,1.17e-09,14;UBERON:0005095,1.17e-09,14;UBERON:0007687,1.17e-09,14;UBERON:0005177,1.98e-08,79;UBERON:0006554,2.59e-08,18;UBERON:0001008,9.76e-08,19;UBERON:0000310,8.26e-07,6;UBERON:0001443,8.26e-07,6|phase1_expression=6.56610273129655,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.765389611359628,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.56478268869608,0,0,0.194429899074283,0.139986421625363,0,0,0,0,0,0,0,2.22548106945558,1.5869729378161,0,0,0,0.449949858640699,0,0,0,1.15265491596466,0,0.135005938331691,0,0,0,0,0.0958454710182364,0,1.10115880999389,0.383062014255563,0.153606533256243,0.923204014111357,0.457438218012048,1.04182674111352,0.837548997004143,0.56276261003168,0.30559649555362,0.589257170947335,0.284743361598206,0.186399445825301,0.075726193333184,0.226714680320357,0,0,0,0,0,0,0.280888840263504,1.02258193546835,0.779358013808606,1.41335829804136,2.39433813620357,2.56652954828636,0,0,1.73192832808971,1.01343946190039,1.51657333504435,0.5709193985953,0,0.593768556259299,1.21439728736295,1.82679286987285,0,0.753613202763113,1.88141931417128,0.502666365318702,0.247194967734374,0,0,0.323533699894818,0.220841518460394,0,1.86391761218122,0,0,0,0,0,0,0.748953197024114,0,0.125654352112864,0.173824320192276,0,0.62336413367868,0.324482526135515,0.101839363850316,0.124406970610093,0,1.05220927943237,2.21204753036596,1.37941262660084,1.80062129805349,0.60281927134286,0.272145996605311,0,0.374806898238915,0.517406741478031,0.215567992932842,0.567318240503458,0.703804496655795,1.31517439456545,0.278047249225598,0.348252166522167,1.64625709126355,0.59710280045548,0,0,0,0,0.469052119962192,0.720248245844059,1.18372367792605,0.590292695242212,0.308534225774757,0.697601834251224,0.268273401399619,0.934122738937356,0.493679549740441,0.820837320395476,0.972825714550269,0.584799949701329,1.3173006917463,0.402619256281115,0,0.102904612379284,0.330418782983798,0,0.426576501070468,0.232236671860439,0,0,0.22237804384487,0.190225626112559,0,0,0,0,0.19496408711912,0,0,0.199141273254367,1.51734320762465,1.14248512609729,2.25415471346161,1.62921062276251,1.16371492300575,2.59502533594179,1.89709611372772,2.80459281161244,2.82597710114475,2.22114895059241,0,0,0,0,0,0,0.25462585178142,0,0,0,0,0,0,0,0,0,2.58654466233247,0.947457058852424,1.79261474086228,1.35796068620151,2.11221223459652,2.84760637651087,3.33261097240419,2.92700471786698,1.7339865851681,2.43611158613652,2.39182152986231,1.47476983244164,0.690739927463582,1.3018415272336,0,0,1.47529281905711,1.93155722413313,0,0.35163505977661,0.327869890753351,0,0,0,0,0,0,0,0,0,0,0,0.851640511249612,0.534196811001766,0.488660878060728,0,0,0,0,0,0,0,0,0,0.356497378384721,0,0,0,0.680879211507576,0.540183282093931,0.258717367565509,0.428674070063185,0.532020700926821,0.713475270408282,0.329098041204242,1.8267896946876,0.23467170806371,1.0591603543191,0.220528398054962,0.98931751764888,1.13025098687134,0.422190474497091,0.716234064018819,0.492422699235184,0.291480836629851,0.18542530201051,0,0,0,0,0,0,0,0,0,1.90934123603023,0,0.203319467126849,0.108005340821801,0.418176592028937,0.655087691238533,0.134864346384821,0.0826534557253359,0.523511883968059,0,0.621339313086926,0,0,0.165458490457098,0,0.258319646955462,0,0.117357238645754,0,0,0,0,0,0.608175645870493,0.308132871494482,0,0,0,0,0,0,0,0,0,0,0,0,1.10992976687032,3.13998498133165,2.18250001273302,0.19318959403219,0,0,0.214368379079066,0,0,0,0,0,0,0,0,0,0,0,1.03787347584177,0.399024873401031,1.02440163452481,0.729320151204882,1.46729213839588,0.735374033800057,0.666740183404846,0.824140228955577,0,1.26348605881899,0,0.754505365544305,0.468207537349412,0.320125762024346,0.34461281373368,0.476293691283074,0.811190281613988,0.38581844092741,0,0.735994600671987,1.02860775715625,0.354951612318675,0.476872379894642,0.145346416632329,0.188218760830661,0.676916863133412,0.182927972872773,0.263069711437843,0.679020569229309,0,0.355905054372522,0.0985044823755635,0.409231043169689,0.154936841185966,1.15743966588685,0.749431733813838,0,0.214871054048298,0.382576664137687,0.220591419119515,0|short_description=p8@Irx3}}
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=entrezgene:16373
|HGNC=
|MCL_coexpression_id=1211
|TSSclassifier=NA
|UniProt=uniprot:P81067
|association_with_transcript=93bp_to_ENSMUST00000093312,NM_001253822,NM_008393_5end
|cluster_id=chr8:94325446..94325459,-
|description=CAGE_peak_8_at_Irx3_5end
|id=chr8:94325446..94325459,-
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0005178!2.56e-11!17;UBERON:0005181!2.56e-11!17;UBERON:0002224!2.56e-11!17;UBERON:0000915!2.56e-11!17;UBERON:0008947!2.56e-11!17;UBERON:0003258!2.56e-11!17;UBERON:0005153!1.07e-10!17;UBERON:0002048!8.29e-10!14;UBERON:0000117!8.29e-10!14;UBERON:0000171!8.29e-10!14;UBERON:0000170!8.29e-10!14;UBERON:0005597!8.29e-10!14;UBERON:0000118!8.29e-10!14;UBERON:0005157!2.28e-09!27
|ontology_enrichment_uberon_v019_2=UBERON:0005178,5.93e-18,17;UBERON:0005181,5.93e-18,17;UBERON:0002224,5.93e-18,17;UBERON:0000915,5.93e-18,17;UBERON:0008947,5.93e-18,17;UBERON:0003258,5.93e-18,17;UBERON:0005153,5.16e-16,17;UBERON:0002048,8.77e-15,14;UBERON:0000117,8.77e-15,14;UBERON:0000171,8.77e-15,14;UBERON:0000170,8.77e-15,14;UBERON:0005597,8.77e-15,14;UBERON:0000118,8.77e-15,14;UBERON:0005157,5.17e-13,20;UBERON:0009569,1.43e-11,66;UBERON:0002113,1.17e-09,14;UBERON:0003918,1.17e-09,14;UBERON:0011143,1.17e-09,14;UBERON:0005095,1.17e-09,14;UBERON:0007687,1.17e-09,14;UBERON:0005177,1.98e-08,79;UBERON:0006554,2.59e-08,18;UBERON:0001008,9.76e-08,19;UBERON:0000310,8.26e-07,6;UBERON:0001443,8.26e-07,6
|phase1_expression=6.56610273129655,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.765389611359628,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.56478268869608,0,0,0.194429899074283,0.139986421625363,0,0,0,0,0,0,0,2.22548106945558,1.5869729378161,0,0,0,0.449949858640699,0,0,0,1.15265491596466,0,0.135005938331691,0,0,0,0,0.0958454710182364,0,1.10115880999389,0.383062014255563,0.153606533256243,0.923204014111357,0.457438218012048,1.04182674111352,0.837548997004143,0.56276261003168,0.30559649555362,0.589257170947335,0.284743361598206,0.186399445825301,0.075726193333184,0.226714680320357,0,0,0,0,0,0,0.280888840263504,1.02258193546835,0.779358013808606,1.41335829804136,2.39433813620357,2.56652954828636,0,0,1.73192832808971,1.01343946190039,1.51657333504435,0.5709193985953,0,0.593768556259299,1.21439728736295,1.82679286987285,0,0.753613202763113,1.88141931417128,0.502666365318702,0.247194967734374,0,0,0.323533699894818,0.220841518460394,0,1.86391761218122,0,0,0,0,0,0,0.748953197024114,0,0.125654352112864,0.173824320192276,0,0.62336413367868,0.324482526135515,0.101839363850316,0.124406970610093,0,1.05220927943237,2.21204753036596,1.37941262660084,1.80062129805349,0.60281927134286,0.272145996605311,0,0.374806898238915,0.517406741478031,0.215567992932842,0.567318240503458,0.703804496655795,1.31517439456545,0.278047249225598,0.348252166522167,1.64625709126355,0.59710280045548,0,0,0,0,0.469052119962192,0.720248245844059,1.18372367792605,0.590292695242212,0.308534225774757,0.697601834251224,0.268273401399619,0.934122738937356,0.493679549740441,0.820837320395476,0.972825714550269,0.584799949701329,1.3173006917463,0.402619256281115,0,0.102904612379284,0.330418782983798,0,0.426576501070468,0.232236671860439,0,0,0.22237804384487,0.190225626112559,0,0,0,0,0.19496408711912,0,0,0.199141273254367,1.51734320762465,1.14248512609729,2.25415471346161,1.62921062276251,1.16371492300575,2.59502533594179,1.89709611372772,2.80459281161244,2.82597710114475,2.22114895059241,0,0,0,0,0,0,0.25462585178142,0,0,0,0,0,0,0,0,0,2.58654466233247,0.947457058852424,1.79261474086228,1.35796068620151,2.11221223459652,2.84760637651087,3.33261097240419,2.92700471786698,1.7339865851681,2.43611158613652,2.39182152986231,1.47476983244164,0.690739927463582,1.3018415272336,0,0,1.47529281905711,1.93155722413313,0,0.35163505977661,0.327869890753351,0,0,0,0,0,0,0,0,0,0,0,0.851640511249612,0.534196811001766,0.488660878060728,0,0,0,0,0,0,0,0,0,0.356497378384721,0,0,0,0.680879211507576,0.540183282093931,0.258717367565509,0.428674070063185,0.532020700926821,0.713475270408282,0.329098041204242,1.8267896946876,0.23467170806371,1.0591603543191,0.220528398054962,0.98931751764888,1.13025098687134,0.422190474497091,0.716234064018819,0.492422699235184,0.291480836629851,0.18542530201051,0,0,0,0,0,0,0,0,0,1.90934123603023,0,0.203319467126849,0.108005340821801,0.418176592028937,0.655087691238533,0.134864346384821,0.0826534557253359,0.523511883968059,0,0.621339313086926,0,0,0.165458490457098,0,0.258319646955462,0,0.117357238645754,0,0,0,0,0,0.608175645870493,0.308132871494482,0,0,0,0,0,0,0,0,0,0,0,0,1.10992976687032,3.13998498133165,2.18250001273302,0.19318959403219,0,0,0.214368379079066,0,0,0,0,0,0,0,0,0,0,0,1.03787347584177,0.399024873401031,1.02440163452481,0.729320151204882,1.46729213839588,0.735374033800057,0.666740183404846,0.824140228955577,0,1.26348605881899,0,0.754505365544305,0.468207537349412,0.320125762024346,0.34461281373368,0.476293691283074,0.811190281613988,0.38581844092741,0,0.735994600671987,1.02860775715625,0.354951612318675,0.476872379894642,0.145346416632329,0.188218760830661,0.676916863133412,0.182927972872773,0.263069711437843,0.679020569229309,0,0.355905054372522,0.0985044823755635,0.409231043169689,0.154936841185966,1.15743966588685,0.749431733813838,0,0.214871054048298,0.382576664137687,0.220591419119515,0
|short_description=p8@Irx3
}}

Revision as of 08:22, 4 August 2015

Short description:p8@Irx3
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_8_at_Irx3_5end
Coexpression cluster:MCL_coexpression_mm9:1211
Association with transcript: 93bp_to_ENSMUST00000093312, NM_001253822, NM_008393_5end
EntrezGene:16373
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p8@Irx3

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G76.57
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A30.77
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B71.56
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.00
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.00
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.19
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.14
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C32.23
Mouse Granule cells, donor2.CNhs12357.11731-123E31.59
Mouse Granule cells, donor3.CNhs12108.11636-122C70.00
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.45
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.00
Mouse Microglia, donor2.CNhs12634.11736-123E81.15
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.00
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.14
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.00
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F10.00
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D50.00
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.00
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.10
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.00
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D31.10
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F30.38
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D70.15
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.92
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F40.46
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D81.04
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E40.84
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E50.56
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I60.31
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D60.59
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F60.28
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E10.19
Mouse Schwann, donor1.CNhs12507.11728-123D90.08
Mouse Schwann, donor2.CNhs12573.11746-123F90.23
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.00
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.28
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I71.02
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.78
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I81.41
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G62.39
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H12.57
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G11.73
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G21.01
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G31.52
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.57
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D70.59
adrenal gland, embryo E14.CNhs11038.406-44C51.21
adrenal gland, embryo E16.CNhs11004.1254-43D61.83
adrenal gland, embryo E17.CNhs11043.1263-45I10.00
adrenal gland, embryo E18.CNhs11026.1262-18F50.75
adrenal gland, neonate N00.CNhs11191.1311-23C11.88
adrenal gland, neonate N25.CNhs11223.1377-27I30.50
amnion, adult pregnant day17.5.CNhs10488.583-22A80.25
aorta, adult.CNhs10498.46-23H10.00
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.32
bone (os femoris), neonate N16.CNhs11225.1525-43A60.22
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H41.86
cerebellum, adult.CNhs10494.15-8B20.00
cerebellum, neonate N30.CNhs11135.1395-42I20.00
colon, adult.CNhs10468.36-18H70.00
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A40.75
corpus striatum, adult.CNhs10487.19-21D80.00
corpus striatum, neonate N00.CNhs11226.630-43F10.13
cortex, adult.CNhs10473.12-14D50.17
cortex, neonate N30.CNhs11107.1392-42F20.00
diencephalon, adult.CNhs10482.20-12F20.62
diencephalon, neonate N30.CNhs11201.1388-42B20.32
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.10
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.12
epididymis, adult.CNhs10490.58-23B20.00
eyeball, adult.CNhs10484.31-12G41.05
eyeball, embryo E12.CNhs11016.345-16C62.21
eyeball, embryo E14.CNhs10521.399-16E21.38
eyeball, embryo E15.CNhs10593.426-16C91.80
eyeball, embryo E17.CNhs11023.1261-18D40.60
eyeball, neonate N00.CNhs11207.633-15C60.27
eyeball, neonate N01.CNhs11140.1532-43E70.00
eyeball, neonate N02.CNhs11205.1551-44G80.37
eyeball, neonate N16.CNhs11188.777-19A20.52
forelimb, embryo E11.CNhs10596.335-25E20.22
forelimb, embryo E12.CNhs10600.359-14H20.57
forelimb, embryo E13.CNhs10589.384-1E20.70
forelimb, embryo E14.CNhs10577.413-26A81.32
forelimb, embryo E15.CNhs11007.437-20E70.28
forelimb, embryo E17.CNhs10598.1517-43C40.35
forelimb, embryo E18.CNhs11008.1520-43B51.65
gonad, embryo E13.CNhs11044.1564-45I60.60
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.00
heart, embryo E12.CNhs11015.353-12F50.47
heart, embryo E13.CNhs11013.376-3I90.72
heart, embryo E14.CNhs10597.403-26D41.18
heart, embryo E15.CNhs11017.431-16C80.59
heart, embryo E16.CNhs11021.457-17C60.31
heart, embryo E17.CNhs11025.479-18E50.70
heart, embryo E18.CNhs11030.1283-20G30.27
heart, neonate N00.CNhs11213.639-21E30.93
heart, neonate N03.CNhs11221.1349-25I20.49
heart, neonate N10.CNhs11118.749-24G10.82
heart, neonate N16.CNhs11209.782-15G10.97
heart, neonate N20.CNhs11127.821-26I60.58
heart, neonate N25.CNhs11196.1351-25D31.32
heart, neonate N30.CNhs11202.1390-42D20.40
hippocampus, adult.CNhs10478.13-16E80.00
hippocampus, neonate N00.CNhs11228.627-43G10.10
intestinal mucosa, adult.CNhs10506.860-29I30.33
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I50.43
intestine, embryo E13.CNhs11010.381-16D50.23
intestine, embryo E15.CNhs10602.976-16D80.00
intestine, embryo E16.CNhs10585.463-22H40.00
intestine, embryo E17.CNhs10582.482-18D30.22
intestine, embryo E18.CNhs10526.1289-20F70.19
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.00
intestine, neonate N06.CNhs11102.688-20B80.00
intestine, neonate N07.CNhs11095.720-20F20.00
intestine, neonate N10.CNhs11098.755-23A50.19
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.00
intestine, neonate N30.CNhs11131.1384-42G10.20
kidney, embryo E14.CNhs10606.411-4I91.52
kidney, embryo E15.CNhs10997.434-16F81.14
kidney, embryo E16.CNhs10584.464-22A52.25
kidney, embryo E17.CNhs11028.483-18I21.63
kidney, embryo E18.CNhs11001.1288-20C71.16
kidney, neonate N00.CNhs11214.646-21G72.60
kidney, neonate N10.CNhs11206.758-6D51.90
kidney, neonate N20.CNhs11113.832-19I12.80
kidney, neonate N25.CNhs11122.1353-25F32.83
kidney, neonate N30.CNhs11203.1385-42H12.22
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.00
liver, embryo E13.CNhs10524.378-3H60.00
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.25
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.00
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B12.59
lung, embryo E12.CNhs10522.354-16G20.95
lung, embryo E14.CNhs10604.404-26F81.79
lung, embryo E15.CNhs11020.432-17C51.36
lung, embryo E16.CNhs10998.458-17B62.11
lung, embryo E17.CNhs10605.480-44A62.85
lung, embryo E18.CNhs10583.1287-20I63.33
lung, neonate N00.CNhs11224.640-42C62.93
lung, neonate N06.CNhs11212.683-20E51.73
lung, neonate N07.CNhs11111.715-19A32.44
lung, neonate N10.CNhs11219.750-23E62.39
lung, neonate N20.CNhs11109.822-18A41.47
lung, neonate N25.CNhs11119.1359-25C70.69
lung, neonate N30.CNhs11133.1394-42H21.30
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B61.48
mammary gland, adult pregnant day19.CNhs10476.588-5H21.93
medulla oblongata, adult.CNhs10477.17-12C20.00
medulla oblongata, neonate N30.CNhs11200.1396-42A30.35
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.33
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.00
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.00
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.00
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.00
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.00
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.00
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.00
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.00
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.00
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.00
olfactory brain, adult.CNhs10489.18-22I90.00
ovary, adult.CNhs10507.91-2I70.85
ovary, embryo E18.CNhs11040.505-44H70.53
ovary, neonate N00.CNhs11217.1299-22I40.49
oviduct, adult pregnant day01.CNhs10500.988-6G60.00
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.00
pancreas, embryo E15.CNhs11042.1556-45F20.00
pancreas, embryo E16.CNhs11003.460-26E50.00
pancreas, embryo E17.CNhs10599.1558-45G30.00
pancreas, embryo E18.CNhs10580.1535-43I70.00
pancreas, neonate N00.CNhs11105.645-26G90.00
pancreas, neonate N01.CNhs11138.1531-43D70.00
pancreas, neonate N02.CNhs11139.1539-43D80.36
pancreas, neonate N16.CNhs11136.787-43B60.00
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G80.68
pituitary gland, embryo E12.CNhs11018.346-16E60.54
pituitary gland, embryo E13.CNhs11009.370-44C70.26
pituitary gland, embryo E14.CNhs11037.398-44A50.43
pituitary gland, embryo E15.CNhs10592.427-16B90.53
pituitary gland, embryo E16.CNhs11036.449-43F60.71
pituitary gland, embryo E17.CNhs11039.1265-44F50.33
pituitary gland, neonate N00.CNhs11190.1308-22E91.83
placenta, adult pregnant day10.CNhs10472.539-13I70.23
placenta, adult pregnant day17.CNhs10464.577-18G31.06
prostate, adult.CNhs10470.859-1F80.22
skin, adult.CNhs10492.30-1C30.99
skin, neonate N00.CNhs11124.650-25G41.13
skin, neonate N03.CNhs11215.662-22H30.42
skin, neonate N06.CNhs11097.693-20I50.72
skin, neonate N10.CNhs11108.762-6C40.49
small intestine, neonate N16.CNhs11114.790-21I10.29
spinal cord, adult.CNhs10505.24-13C90.19
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C10.00
spleen, embryo E18.CNhs11011.1271-21F20.00
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.00
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H61.91
stomach, embryo E12.CNhs10588.356-43E30.00
stomach, embryo E15.CNhs10603.1252-16G80.20
stomach, embryo E16.CNhs11022.459-17D40.11
stomach, embryo E17.CNhs11006.1035-18D50.42
stomach, embryo E18.CNhs10999.1286-20C60.66
stomach, neonate N03.CNhs11193.1340-24B80.13
stomach, neonate N07.CNhs11210.718-18A90.08
stomach, neonate N25.CNhs11104.1355-25E40.52
stomach, neonate N30.CNhs11134.1386-42I10.00
submandibular gland, adult.CNhs10469.59-29C10.62
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.00
testis, embryo E15.CNhs11034.443-27C50.17
testis, embryo E16.CNhs11033.470-26G50.00
testis, embryo E17.CNhs11029.486-18I50.26
testis, embryo E18.CNhs11027.503-18G50.00
testis, neonate N00.CNhs11189.1300-22B70.12
testis, neonate N07.CNhs11222.726-26I40.00
testis, neonate N10.CNhs11204.763-44D90.00
testis, neonate N20.CNhs11110.839-18H30.00
testis, neonate N30.CNhs11130.1391-42E20.00
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I40.61
thymus, embryo E15.CNhs11005.430-45I20.31
thymus, embryo E16.CNhs11002.456-26C50.00
thymus, embryo E17.CNhs10581.478-18C10.00
thymus, embryo E18.CNhs10595.1273-19G40.00
thymus, neonate N02.CNhs11181.1541-43F80.00
thymus, neonate N03.CNhs11137.2104-43C70.00
thymus, neonate N06.CNhs11197.681-26C40.00
thymus, neonate N07.CNhs11211.713-19D30.00
thymus, neonate N10.CNhs11194.748-24E40.00
thymus, neonate N20.CNhs11186.820-7A20.00
thymus, neonate N25.CNhs11125.1362-25G70.00
thymus, neonate N30.CNhs11132.1393-42G20.00
tongue, adult.CNhs10499.32-1B40.00
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H31.11
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F73.14
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G52.18
urinary bladder, adult.CNhs10481.879-12E40.19
uterus, adult pregnant day19.CNhs10497.590-15F50.00
uterus, adult.CNhs10509.92-27E50.00
vagina, adult.CNhs10502.89-27D50.21
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A10.00
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A20.00
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A30.00
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D70.00
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A40.00
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A50.00
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A60.00
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A70.00
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A80.00
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A90.00
whole body, embryo E11.CNhs11014.324-5I81.04
whole body, embryo E12.CNhs10587.857-27C90.40
whole body, embryo E13.CNhs10512.372-23H21.02
whole body, embryo E14.5.CNhs10578.420-27D20.73
whole body, embryo E14.CNhs10519.395-14B11.47
whole body, embryo E16.CNhs10514.453-14F20.74
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.67
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.82
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G51.26
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.75
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.47
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.32
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.34
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.48
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.81
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.39
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.74
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G51.03
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.35
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.48
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G50.15
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.19
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.68
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.18
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.26
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.68
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.36
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.10
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.15
whole body, embryo E17.5.CNhs10513.490-9F91.16
whole body, embryo E17.CNhs10517.475-3I50.75
whole body, embryo E18.CNhs10516.493-3B30.00
whole body, neonate N00.CNhs10525.657-19C20.21
whole body, neonate N01.CNhs10576.659-23C60.38
whole body, neonate N06.CNhs10515.692-21D10.22
whole body, neonate N10.CNhs10518.761-6B40.00





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
thoracic cavity element5.93e-1817
thoracic segment organ5.93e-1817
thoracic cavity5.93e-1817
thoracic segment of trunk5.93e-1817
respiratory primordium5.93e-1817
endoderm of foregut5.93e-1817
epithelial bud5.16e-1617
lung8.77e-1514
respiratory tube8.77e-1514
respiration organ8.77e-1514
pair of lungs8.77e-1514
lung primordium8.77e-1514
lung bud8.77e-1514
epithelial fold5.17e-1320
subdivision of trunk1.43e-1166
kidney1.17e-0914
kidney mesenchyme1.17e-0914
upper urinary tract1.17e-0914
kidney rudiment1.17e-0914
kidney field1.17e-0914
trunk region element1.98e-0879
urinary system structure2.59e-0818
renal system9.76e-0819
breast8.26e-076
chest8.26e-076
Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=FFCP_PHASE1:Mm9::chr8:94325446..94325459,-&oldid=3756329"