FFCP PHASE1:Hg19::chr17:4689735..4689745,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |DHSsupport=supported | ||
|DPIdataset=robust | |DPIdataset=robust | ||
|EntrezGene=284013 | |EntrezGene=entrezgene:284013 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | ||
|HGNC=30387 | |HGNC=HGNC:30387 | ||
|TSSclassifier=strong | |TSSclassifier=strong | ||
|UniProt=Q7Z5L0,E9PGP4,E9PAU9,C9JQ15 | |UniProt=uniprot:Q7Z5L0,uniprot:E9PGP4,uniprot:E9PAU9,uniprot:C9JQ15 | ||
|association_with_transcript=-6bp_to_ENST00000328739,ENST00000354194,ENST00000416307,ENST00000441199,NM_001144939,NM_001144940,NM_001144941,NM_182566,uc002fyx.2,uc002fyy.2,uc010vsh.1,uc010vsi.1_5end | |association_with_transcript=-6bp_to_ENST00000328739,ENST00000354194,ENST00000416307,ENST00000441199,NM_001144939,NM_001144940,NM_001144941,NM_182566,uc002fyx.2,uc002fyy.2,uc010vsh.1,uc010vsi.1_5end | ||
|cluster_id=chr17:4689735..4689745,- | |||
|coexpression_cluster_id=C61 | |coexpression_cluster_id=C61 | ||
|description=CAGE_peak_2_at_VMO1_5end | |description=CAGE_peak_2_at_VMO1_5end |
Revision as of 18:14, 25 July 2015
Short description: | p2@VMO1 |
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Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_VMO1_5end |
Coexpression cluster: | C61_migratory_Dendritic_immature_Macrophage_xeroderma_cord_b |
Association with transcript: | -6bp_to_ENST00000328739, ENST00000354194, ENST00000416307, ENST00000441199, NM_001144939, NM_001144940, NM_001144941, NM_182566, uc002fyx.2, uc002fyy.2, uc010vsh.1, uc010vsi.1_5end |
EntrezGene: | 284013 |
HGNC: | 30387 |
UniProt: | Q7Z5L0E9PGP4E9PAU9C9JQ15 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
Sample | p2@VMO1 |
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- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
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non-classical monocyte | 3.76e-66 | 3 |
CD14-low, CD16-positive monocyte | 3.76e-66 | 3 |
Langerhans cell | 1.30e-40 | 5 |
smooth muscle cell of the pulmonary artery | 5.13e-23 | 1 |
conventional dendritic cell | 5.99e-23 | 8 |
intermediate monocyte | 1.17e-22 | 9 |
CD14-positive, CD16-positive monocyte | 1.17e-22 | 9 |
dendritic cell | 6.40e-19 | 10 |
myeloid cell | 7.97e-10 | 108 |
common myeloid progenitor | 7.97e-10 | 108 |
Showing 1 to 10 of 13 entries
Ontology term | p-value | n |
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mixed ectoderm/mesoderm/endoderm-derived structure | 3.24e-12 | 2 |
developing epithelial placode | 3.24e-12 | 2 |
respiratory system arterial blood vessel | 3.24e-12 | 2 |
respiratory system blood vessel | 3.24e-12 | 2 |
respiratory system artery | 3.24e-12 | 2 |
head blood vessel | 3.24e-12 | 2 |
pulmonary artery | 3.24e-12 | 2 |
pulmonary vascular system | 3.24e-12 | 2 |
pharyngeal vasculature | 3.24e-12 | 2 |
truncus arteriosus | 3.24e-12 | 2 |
Showing 1 to 10 of 24 entries