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FFCP PHASE1:Hg19::chr17:4689735..4689745,-: Difference between revisions

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{{FFCP
{{FFCP
|DHSsupport=supported
|DHSsupport=supported
|DPIdataset=robust
|DPIdataset=robust
|EntrezGene=284013
|EntrezGene=entrezgene:284013
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding
|HGNC=30387
|HGNC=HGNC:30387
|TSSclassifier=strong
|TSSclassifier=strong
|UniProt=Q7Z5L0,E9PGP4,E9PAU9,C9JQ15
|UniProt=uniprot:Q7Z5L0,uniprot:E9PGP4,uniprot:E9PAU9,uniprot:C9JQ15
|association_with_transcript=-6bp_to_ENST00000328739,ENST00000354194,ENST00000416307,ENST00000441199,NM_001144939,NM_001144940,NM_001144941,NM_182566,uc002fyx.2,uc002fyy.2,uc010vsh.1,uc010vsi.1_5end
|association_with_transcript=-6bp_to_ENST00000328739,ENST00000354194,ENST00000416307,ENST00000441199,NM_001144939,NM_001144940,NM_001144941,NM_182566,uc002fyx.2,uc002fyy.2,uc010vsh.1,uc010vsi.1_5end
|cluster_id=chr17:4689735..4689745,-
|coexpression_cluster_id=C61
|coexpression_cluster_id=C61
|description=CAGE_peak_2_at_VMO1_5end
|description=CAGE_peak_2_at_VMO1_5end

Revision as of 18:14, 25 July 2015

Short description:p2@VMO1
Species:Human (Homo sapiens)
DPI dataset: Robust
TSS-like-by-RIKEN-classifier(Yes/No): Yes
DHS support(Yes/No): Yes
Description: CAGE_peak_2_at_VMO1_5end
Coexpression cluster:C61_migratory_Dendritic_immature_Macrophage_xeroderma_cord_b
Association with transcript: -6bp_to_ENST00000328739, ENST00000354194, ENST00000416307, ENST00000441199, NM_001144939, NM_001144940, NM_001144941, NM_182566, uc002fyx.2, uc002fyy.2, uc010vsh.1, uc010vsi.1_5end
EntrezGene:284013
HGNC: 30387
UniProt: Q7Z5L0E9PGP4E9PAU9C9JQ15
Genome view:ZENBU


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CAGE Expression




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  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data