FFCP PHASE1:Hg19::chr17:7531121..7531198,-: Difference between revisions
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|DHSsupport=supported | |DHSsupport=supported | ||
|DPIdataset=robust | |DPIdataset=robust | ||
|EntrezGene= | |EntrezGene=112483 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | ||
|HGNC= | |HGNC=23160 | ||
|TSSclassifier=strong | |TSSclassifier=strong | ||
|UniProt= | |UniProt=Q96F10 | ||
|association_with_transcript=0bp_to_ENST00000269298,ENST00000380466,NM_133491,uc002gib.1,uc002gic.2_5end | |association_with_transcript=0bp_to_ENST00000269298,ENST00000380466,NM_133491,uc002gib.1,uc002gic.2_5end | ||
|cluster_id=chr17:7531121..7531198,- | |cluster_id=chr17:7531121..7531198,- | ||
Latest revision as of 18:11, 17 September 2015
| Short description: | p1@SAT2 |
|---|---|
| Species: | Human (Homo sapiens) |
| DPI dataset: | Robust |
| TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
| DHS support(Yes/No): | Yes |
| Description: | CAGE_peak_1_at_SAT2_5end |
| Coexpression cluster: | NA |
| Association with transcript: | 0bp_to_ENST00000269298, ENST00000380466, NM_133491, uc002gib.1, uc002gic.2_5end |
| EntrezGene: | SAT2 |
| HGNC: | 23160 |
| UniProt: | Q96F10 |
| Genome view: | ZENBU |
View on UCSC genome browser
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CAGE Expression
| Sample | p1@SAT2 |
|---|
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- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| defensive cell | 5.57e-21 | 48 |
| phagocyte | 5.57e-21 | 48 |
| classical monocyte | 2.43e-20 | 42 |
| CD14-positive, CD16-negative classical monocyte | 2.43e-20 | 42 |
| monopoietic cell | 1.22e-16 | 59 |
| monocyte | 1.22e-16 | 59 |
| monoblast | 1.22e-16 | 59 |
| promonocyte | 1.22e-16 | 59 |
| macrophage dendritic cell progenitor | 1.27e-16 | 61 |
| granulocyte monocyte progenitor cell | 1.40e-13 | 67 |
Showing 1 to 10 of 12 entries
| Ontology term | p-value | n |
|---|---|---|
| embryo | 4.96e-21 | 592 |
| developing anatomical structure | 1.97e-20 | 581 |
| germ layer | 1.29e-17 | 560 |
| germ layer / neural crest | 1.29e-17 | 560 |
| embryonic tissue | 1.29e-17 | 560 |
| presumptive structure | 1.29e-17 | 560 |
| germ layer / neural crest derived structure | 1.29e-17 | 560 |
| epiblast (generic) | 1.29e-17 | 560 |
| musculoskeletal system | 5.00e-17 | 167 |
| embryonic structure | 5.19e-17 | 564 |
Showing 1 to 10 of 22 entries
