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== semantic search test ==
== semantic search test ==
Samples
Samples
{{#if|{{#urlget:sq}}|
{{#ask:[[Category:FF_Ontology]][[name::~*{{#urlget:sq}}*]]|?name}}
{{#ask:[[Category:FF_Ontology]][[name::~*{{#urlget:sq}}*]]|?name}}
}}


Motifs
Motifs

Revision as of 11:29, 15 March 2012

motif without matrices Swissregulon:SRY.p1 Swissregulon:HOX(A,B,D)3.p1


semantic search test

Samples {{#if||

 Name
0000001sample
0000002in vivo cell sample
0000003cell line sample
0000004tissue sample
0000005primary cell line sample
0000006permanent cell line sample
0000007adrenal cortex cell
0000008adrenal chromaffin cell
0000009human amniotic epithelial cell sample
0000010human amniotic membrane cell- Amnion sample
0000011human subcutaneous adipocyte sample
0000012human alveolar epithelial cell sample
0000013human basophil sample
0000014intrahepatic biliary epithelial cell
0000015human bronchial epithelial cell sample
0000016canine sample
0000017canine aortic smooth muscle cell
0000018canine hepatocyte
0000019canine mesenchymal stem cell
0000020human CD133-positive progenitor cell- bone marrow derived sample
0000021hematopoietic stem cell sample
0000022human CD133-positive stem cell - cord blood derived sample
0000023CD133-positive hematopoietic stem cell-3HBiomedical
0000024human CD14-positive monocyte sample
0000025CD19-positive B cell sample
0000026human CD34-positive hematopoietic stem cell sample
0000027human CD133-positive hematopoeitic stem cell sample
0000028CD34-positive hematopoietic stem cell-CET
0000029CD34-positive hematopoietic stem cell-3HBiomedical
0000030CD8-positive T cell sample
0000031CD4-positive T cell sample
0000032chicken sample
0000033chicken aortic smooth muscle cell
0000034chicken hepatocyte
0000035chicken mesenchymal stem cell
0000036chondroblast
0000037human chondrocyte sample
0000038human chorionic membrane stem cell sample
0000039human adipocyte of omentum tissue sample
0000040human ciliary epithelial cell sample
0000041common myeloid progenitor sample
0000042pancreatic stromal cell
0000043human corneal epithelial cell sample
0000044human monocyte immature derived dendritic cell sample
0000045human plasmacytoid dendritic cell sample
0000046human endothelial cell sample
0000047human endothelial cell of the artery sample
0000048human endothelial cell of the aorta sample
0000049human lymphatic endothelial cell sample
0000050human microvascular endothelial cell sample
... further results

}}

Motifs

CAGE Peaks (hg19)



    Sample of clicked point:


    sample

    		Mm9::chr4:32744082..32744141,+Mm9::chr4:32744082..32744141,+Mm9::chr4:32744159..32744169,+Mm9::chr4:32744159..32744169,+Mm9::chr4:32809978..32809991,+Mm9::chr4:32809978..32809991,+Mm9::chr4:32810017..32810026,+Mm9::chr4:32810017..32810026,+Mm9::chr4:32837666..32837670,+Mm9::chr4:32837666..32837670,+
     Name
    0000170human smooth muscle cell of the brain vasculature sample
    0000290brain- fetal week 12
    0000291brain- fetal week 10
    0000955brain
    0001890forebrain
    0001891midbrain
    0002028hindbrain
    0002298brainstem
    0002308nucleus of brain
    0002314midbrain tectum
    0002590smooth muscle cell of the brain vasculature
    0002616regional part of brain
    0002743basal forebrain
    0002780regional part of forebrain
    0002950regional part of midbrain
    0003528brain grey matter
    0003544brain white matter
    0003947brain ventricle/choroid plexus
    0004086brain ventricle
    0004733segmental subdivision of hindbrain
    0004904nerve connecting eye with brain
    0005282ventricular system of brain
    0005284brain vasculature
    0005970brain commissure
    0006238future brain
    0006240future forebrain
    0006331brainstem nucleus
    0007277presumptive hindbrain
    0007702tract of brain
    0009616presumptive midbrain
    0009661midbrain nucleus
    0009662hindbrain nucleus
    0010009aggregate regional part of brain
    0010012human brain - adult sample
    0010085human brain - fetal sample
    0010286midbrain neural tube
    0011286mouse olfactory brain- adult sample
    0012000astrocyte of the forebrain
    0012001neuron of the forebrain
    0013150future brain vesicle
    0015827brainstem reticular formation
    0100255brain cell line sample
    0100690brain cancer cell line sample
    10012-101C3brain, adult, pool1
    10084-102B3brain, adult, donor1
    10085-102B4brain, fetal, pool1
    1319brain cancer
    18-22I9olfactory brain, adult
    2000005brain macroglial cell
    936brain disease
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