FFCP PHASE1:Mm9::chr3:95540003..95540044,-: Difference between revisions
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|id=chr3:95540003..95540044,- | |id=chr3:95540003..95540044,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019_2=CL:0002453,2.42e-11,8;CL:0000333,7.81e-09,10;CL:0000095,7.81e-09,10;CL:0000243,7.81e-09,10;CL:0000123,7.81e-09,10;CL:0000125,7.81e-09,10;CL:0000030,7.81e-09,10;CL:0000339,7.81e-09,10;CL:0000680,4.37e-08,6;CL:0000187,4.37e-08,6;CL:0000056,4.37e-08,6;CL:0000128,4.52e-08,6;CL:0000126,4.52e-08,6;CL:0000127,4.52e-08,6;CL:0000068,1.15e-07,3;CL:0002202,1.15e-07,3;CL:0000069,1.15e-07,3;CL:0002632,1.15e-07,3;CL:0002368,1.15e-07,3;CL:0000307,1.15e-07,3;CL:0000377,1.15e-07,3;CL:0000192,4.89e-07,3;CL:0000359,4.89e-07,3;CL:0002539,4.89e-07,3;CL:0000514,4.89e-07,3;CL:0002092,6.72e-07,3;CL:0002540,6.72e-07,3;CL:0000222,7.30e-07,7 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |ontology_enrichment_uberon= | ||
|ontology_enrichment_uberon_v019_2=UBERON:0005256,1.53e-08,45;UBERON:0003126,1.15e-07,3;UBERON:0001005,1.15e-07,3;UBERON:0007196,1.15e-07,3;UBERON:0001558,1.15e-07,3;UBERON:0001135,4.89e-07,3;UBERON:0004237,4.89e-07,3;UBERON:0004695,4.89e-07,3;UBERON:0002111,4.89e-07,3;UBERON:0004178,4.89e-07,3;UBERON:0003104,6.73e-07,61;UBERON:0009142,6.73e-07,61;UBERON:0002369,8.46e-07,7;UBERON:0006858,8.46e-07,7 | |||
|phase1_expression=0,0,0,0,0,0,0,1.29123323441576,0,0.234064526321993,0,0,0,0.174840804837995,0,0,0,0,0,0,0.765389611359628,0,0,0,0,0,0,0,0,0,0.221730510655305,0,0,0,0,0,0,0,0,0,0,0,0,3.77690453926732,2.02753862439029,4.9557623083654,3.9119567217402,0.436050312760893,2.63623419281366,2.3331587888914,1.53985063787899,1.43752564364972,0,0,0,2.05807548828758,0.573066879877513,1.03134418455488,0,0,0,1.0165335962074,0.889294796111139,1.7997994345628,3.9554654502679,3.5524005747305,1.79760066311043,3.45796474789399,0.103689612308478,0,0,0,0,0,0,0,0,0.893811366596314,1.22885226604995,0,0.0914876436024097,0,0,0.56276261003168,0,0,0,0,0.302904773332736,0.0755715601067855,0.289864488701678,4.30211938490693,0,0,1.94932925234301,0.896053774194671,0.421333260395256,0.852151612890289,1.03914401841148,2.12003744706204,0,1.28326477414318,0,0,10.8245520505607,12.92135313923,18.704404465547,0.45673551887624,0.517875767294343,2.07818994690755,1.73485326766136,2.43572382649713,1.84492397804847,0.452167921657868,2.11659672844269,0.879666139307728,0.988779870937496,0.578397427679647,0.884610551949874,0.161766849947409,0.220841518460394,0,0,1.46390398505774,2.72280718857492,0,0,0,0,0,0,0,0.173824320192276,0,1.24672826735736,0.811206315338788,0.712875546952214,0.497627882440372,0.758168275301024,0,0,0.229902104433473,0,0,0.204109497453984,0.12811372028485,0.281105173679186,0.258703370739016,0,0,0,0,0,0,0.411564272815887,0.995171334092466,0,0,0,0.621377317606506,0,0,0.23674473558521,0,0.154267112887378,0,0,0.116765342367169,0,0,0,0.292399974850665,0,0.268412837520744,0,0,0,0,0,0,0,0,0,0.190225626112559,0,0.164698954724011,0,0,0.19496408711912,0,0.216138049874694,0.597423819763102,2.0863469104839,0.228497025219458,0,0.203651327845314,0.193952487167626,0.49095073923223,0.0632365371242573,0.147610147979602,0.31399745568275,1.1105744752962,0.592905254174298,0.166845105716094,0,0,0,0,0,0,1.94562272130042,0,1.43768206527355,1.48856379067401,0,0,0,2.41221760681684,0.184753190166605,0.37898282354097,0,0,0,0,0,0.780534591431195,0,0.44292937929755,0.159454768657487,0.163863314715738,0.172684981865896,0.289298117163023,1.50791283939272,0.54390568381871,0.491764273019036,0.827810238914197,0.321101179975584,0,0.163934945376675,0,0,0,0,0.477937595905104,0,0.283076530788832,0.404810701674894,0,0,0,1.13552068166615,1.42452482933804,1.79175655288934,0.659880491890142,0,0,0,0,0,0,0.516856586336442,0,0,0.316036757935816,0,0,0,0,0,0,0,0,0,0.304464949114599,0.704015124191131,0,0.220528398054962,0.8244312647074,1.77610869365496,0.482503399425247,0.477489376012546,0.328281799490123,0,0,0.170870880797853,0.412773735926445,0,0,0.27338845544205,0,0,0,0.138199973804424,0,0,0.203319467126849,0.108005340821801,0.418176592028937,1.09181281873089,0,0.247960367176008,0.26175594198403,0.518459893167171,0,0,0,0.165458490457098,0,0.129159823477731,0,0,0.13020438484395,0.209718688851422,0,0.288030006257865,0,0,0,0,0.179026695667481,0,0,0.147689527174577,0,0.228620419965,0,0,0.192423683280659,0,2.94749498699775,0,0.0897138566094757,0.167884616364078,0.579568782096571,0.750729901804728,0.915758121336325,6.21668299329291,0,0,0,0,0,0,0,0,0,0,0,0,0.399024873401031,0.170733605754134,0,0,0,0.44449345560323,0,0,0,0,0.188626341386076,0,0,0.17230640686684,0,0,0.192909220463705,0,0,0,0.177475806159338,0,0,0,0,0,0.263069711437843,0,0.561142271657738,0,0.0985044823755635,0,0,0.385813221962283,0.499621155875892,0.467863216890817,0.859484216193193,1.3390183244819,0.441182838239031,0 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|phase1_expression=0,0,0,0,0,0,0,1.29123323441576,0,0.234064526321993,0,0,0,0.174840804837995,0,0,0,0,0,0,0.765389611359628,0,0,0,0,0,0,0,0,0,0.221730510655305,0,0,0,0,0,0,0,0,0,0,0,0,3.77690453926732,2.02753862439029,4.9557623083654,3.9119567217402,0.436050312760893,2.63623419281366,2.3331587888914,1.53985063787899,1.43752564364972,0,0,0,2.05807548828758,0.573066879877513,1.03134418455488,0,0,0,1.0165335962074,0.889294796111139,1.7997994345628,3.9554654502679,3.5524005747305,1.79760066311043,3.45796474789399,0.103689612308478,0,0,0,0,0,0,0,0,0.893811366596314,1.22885226604995,0,0.0914876436024097,0,0,0.56276261003168,0,0,0,0,0.302904773332736,0.0755715601067855,0.289864488701678,4.30211938490693,0,0,1.94932925234301,0.896053774194671,0.421333260395256,0.852151612890289,1.03914401841148,2.12003744706204,0,1.28326477414318,0,0,10.8245520505607,12.92135313923,18.704404465547,0.45673551887624,0.517875767294343,2.07818994690755,1.73485326766136,2.43572382649713,1.84492397804847,0.452167921657868,2.11659672844269,0.879666139307728,0.988779870937496,0.578397427679647,0.884610551949874,0.161766849947409,0.220841518460394,0,0,1.46390398505774,2.72280718857492,0,0,0,0,0,0,0,0.173824320192276,0,1.24672826735736,0.811206315338788,0.712875546952214,0.497627882440372,0.758168275301024,0,0,0.229902104433473,0,0,0.204109497453984,0.12811372028485,0.281105173679186,0.258703370739016,0,0,0,0,0,0,0.411564272815887,0.995171334092466,0,0,0,0.621377317606506,0,0,0.23674473558521,0,0.154267112887378,0,0,0.116765342367169,0,0,0,0.292399974850665,0,0.268412837520744,0,0,0,0,0,0,0,0,0,0.190225626112559,0,0.164698954724011,0,0,0.19496408711912,0,0.216138049874694,0.597423819763102,2.0863469104839,0.228497025219458,0,0.203651327845314,0.193952487167626,0.49095073923223,0.0632365371242573,0.147610147979602,0.31399745568275,1.1105744752962,0.592905254174298,0.166845105716094,0,0,0,0,0,0,1.94562272130042,0,1.43768206527355,1.48856379067401,0,0,0,2.41221760681684,0.184753190166605,0.37898282354097,0,0,0,0,0,0.780534591431195,0,0.44292937929755,0.159454768657487,0.163863314715738,0.172684981865896,0.289298117163023,1.50791283939272,0.54390568381871,0.491764273019036,0.827810238914197,0.321101179975584,0,0.163934945376675,0,0,0,0,0.477937595905104,0,0.283076530788832,0.404810701674894,0,0,0,1.13552068166615,1.42452482933804,1.79175655288934,0.659880491890142,0,0,0,0,0,0,0.516856586336442,0,0,0.316036757935816,0,0,0,0,0,0,0,0,0,0.304464949114599,0.704015124191131,0,0.220528398054962,0.8244312647074,1.77610869365496,0.482503399425247,0.477489376012546,0.328281799490123,0,0,0.170870880797853,0.412773735926445,0,0,0.27338845544205,0,0,0,0.138199973804424,0,0,0.203319467126849,0.108005340821801,0.418176592028937,1.09181281873089,0,0.247960367176008,0.26175594198403,0.518459893167171,0,0,0,0.165458490457098,0,0.129159823477731,0,0,0.13020438484395,0.209718688851422,0,0.288030006257865,0,0,0,0,0.179026695667481,0,0,0.147689527174577,0,0.228620419965,0,0,0.192423683280659,0,2.94749498699775,0,0.0897138566094757,0.167884616364078,0.579568782096571,0.750729901804728,0.915758121336325,6.21668299329291,0,0,0,0,0,0,0,0,0,0,0,0,0.399024873401031,0.170733605754134,0,0,0,0.44449345560323,0,0,0,0,0.188626341386076,0,0,0.17230640686684,0,0,0.192909220463705,0,0,0,0.177475806159338,0,0,0,0,0,0.263069711437843,0,0.561142271657738,0,0.0985044823755635,0,0,0.385813221962283,0.499621155875892,0.467863216890817,0.859484216193193,1.3390183244819,0.441182838239031,0 | ||
|short_description=p@chr3:95540003..95540044,- | |short_description=p@chr3:95540003..95540044,- | ||
}} | }} |
Revision as of 12:57, 14 November 2012
Short description: | p@chr3:95540003..95540044, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr3:95540003..95540044, - |
Coexpression cluster: | MCL_coexpression_mm9:72 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
oligodendrocyte precursor cell | 2.42e-11 | 8 |
migratory neural crest cell | 7.81e-09 | 10 |
neuron associated cell | 7.81e-09 | 10 |
glial cell (sensu Vertebrata) | 7.81e-09 | 10 |
neuron associated cell (sensu Vertebrata) | 7.81e-09 | 10 |
glial cell | 7.81e-09 | 10 |
glioblast | 7.81e-09 | 10 |
glioblast (sensu Vertebrata) | 7.81e-09 | 10 |
muscle precursor cell | 4.37e-08 | 6 |
muscle cell | 4.37e-08 | 6 |
myoblast | 4.37e-08 | 6 |
oligodendrocyte | 4.52e-08 | 6 |
macroglial cell | 4.52e-08 | 6 |
astrocyte | 4.52e-08 | 6 |
duct epithelial cell | 1.15e-07 | 3 |
epithelial cell of tracheobronchial tree | 1.15e-07 | 3 |
branched duct epithelial cell | 1.15e-07 | 3 |
epithelial cell of lower respiratory tract | 1.15e-07 | 3 |
respiratory epithelial cell | 1.15e-07 | 3 |
tracheal epithelial cell | 1.15e-07 | 3 |
tracheoblast | 1.15e-07 | 3 |
smooth muscle cell | 4.89e-07 | 3 |
vascular associated smooth muscle cell | 4.89e-07 | 3 |
aortic smooth muscle cell | 4.89e-07 | 3 |
smooth muscle myoblast | 4.89e-07 | 3 |
bone marrow cell | 6.72e-07 | 3 |
mesenchymal stem cell of the bone marrow | 6.72e-07 | 3 |
mesodermal cell | 7.30e-07 | 7 |
Ontology term | p-value | n |
---|---|---|
trunk mesenchyme | 1.53e-08 | 45 |
trachea | 1.15e-07 | 3 |
respiratory airway | 1.15e-07 | 3 |
tracheobronchial tree | 1.15e-07 | 3 |
lower respiratory tract | 1.15e-07 | 3 |
smooth muscle tissue | 4.89e-07 | 3 |
blood vessel smooth muscle | 4.89e-07 | 3 |
arterial system smooth muscle | 4.89e-07 | 3 |
artery smooth muscle tissue | 4.89e-07 | 3 |
aorta smooth muscle tissue | 4.89e-07 | 3 |
mesenchyme | 6.73e-07 | 61 |
entire embryonic mesenchyme | 6.73e-07 | 61 |
adrenal gland | 8.46e-07 | 7 |
adrenal/interrenal gland | 8.46e-07 | 7 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.