FFCP PHASE1:Mm9::chr5:120881766..120881780,-: Difference between revisions
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|id=chr5:120881766..120881780,- | |id=chr5:120881766..120881780,- | ||
|ontology_enrichment_celltype=CL:0000117!2.08e-36!23;CL:0000337!2.08e-36!23;CL:0000540!1.76e-23!33;CL:0000047!1.76e-23!33;CL:0000031!1.76e-23!33;CL:0000404!1.76e-23!33;CL:0000393!6.35e-19!39;CL:0000211!6.35e-19!39;CL:0002319!1.34e-16!43;CL:0000221!4.38e-16!44;CL:0000133!4.38e-16!44;CL:0000055!1.93e-13!50;CL:0002609!1.35e-09!6;CL:0002321!5.64e-08!70;CL:0000220!5.64e-08!70;CL:0000120!1.85e-07!3;CL:0002613!2.79e-07!3;CL:0002612!9.73e-07!3 | |ontology_enrichment_celltype=CL:0000117!2.08e-36!23;CL:0000337!2.08e-36!23;CL:0000540!1.76e-23!33;CL:0000047!1.76e-23!33;CL:0000031!1.76e-23!33;CL:0000404!1.76e-23!33;CL:0000393!6.35e-19!39;CL:0000211!6.35e-19!39;CL:0002319!1.34e-16!43;CL:0000221!4.38e-16!44;CL:0000133!4.38e-16!44;CL:0000055!1.93e-13!50;CL:0002609!1.35e-09!6;CL:0002321!5.64e-08!70;CL:0000220!5.64e-08!70;CL:0000120!1.85e-07!3;CL:0002613!2.79e-07!3;CL:0002612!9.73e-07!3 | ||
|ontology_enrichment_celltype_v019_2=CL:0000117,6.15e-29,23;CL:0000337,6.15e-29,23;CL:0000120,4.98e-22,3;CL:0002613,2.08e-21,3;CL:0000540,6.54e-20,33;CL:0000047,6.54e-20,33;CL:0000031,6.54e-20,33;CL:0000404,6.54e-20,33;CL:0000393,1.05e-16,39;CL:0000211,1.05e-16,39;CL:0002319,4.58e-15,43;CL:0000221,1.06e-14,44;CL:0000133,1.06e-14,44;CL:0002612,7.57e-10,3;CL:0002321,7.37e-09,70 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!1.35e-19!52;UBERON:0005068!1.35e-19!52;UBERON:0006241!1.35e-19!52;UBERON:0007135!1.35e-19!52;UBERON:0001017!3.15e-19!73;UBERON:0005743!3.15e-19!73;UBERON:0000073!1.72e-18!75;UBERON:0001016!1.72e-18!75;UBERON:0003076!1.42e-14!12;UBERON:0003057!1.42e-14!12;UBERON:0002616!2.69e-14!49;UBERON:0000955!6.85e-14!50;UBERON:0006238!6.85e-14!50;UBERON:0002020!1.39e-13!34;UBERON:0002346!1.86e-12!71;UBERON:0003075!1.86e-12!71;UBERON:0007284!1.86e-12!71;UBERON:0002240!1.26e-11!6;UBERON:0005174!1.26e-11!6;UBERON:0001137!1.26e-11!6;UBERON:0004121!2.11e-11!102;UBERON:0000924!2.11e-11!102;UBERON:0006601!2.11e-11!102;UBERON:0002298!8.90e-11!6;UBERON:0001948!5.13e-10!5;UBERON:0002315!5.13e-10!5;UBERON:0000033!8.20e-10!63;UBERON:0003080!5.00e-09!40;UBERON:0002420!1.26e-08!8;UBERON:0007245!1.26e-08!8;UBERON:0010009!1.26e-08!8;UBERON:0010011!1.26e-08!8;UBERON:0000454!1.26e-08!8;UBERON:0002780!4.21e-08!39;UBERON:0001890!4.21e-08!39;UBERON:0006240!4.21e-08!39;UBERON:0002791!8.25e-08!29;UBERON:0003528!8.25e-08!29;UBERON:0001893!8.25e-08!29;UBERON:0002950!1.07e-07!4;UBERON:0001891!1.07e-07!4;UBERON:0009616!1.07e-07!4;UBERON:0002257!9.73e-07!3 | |ontology_enrichment_uberon=UBERON:0001049!1.35e-19!52;UBERON:0005068!1.35e-19!52;UBERON:0006241!1.35e-19!52;UBERON:0007135!1.35e-19!52;UBERON:0001017!3.15e-19!73;UBERON:0005743!3.15e-19!73;UBERON:0000073!1.72e-18!75;UBERON:0001016!1.72e-18!75;UBERON:0003076!1.42e-14!12;UBERON:0003057!1.42e-14!12;UBERON:0002616!2.69e-14!49;UBERON:0000955!6.85e-14!50;UBERON:0006238!6.85e-14!50;UBERON:0002020!1.39e-13!34;UBERON:0002346!1.86e-12!71;UBERON:0003075!1.86e-12!71;UBERON:0007284!1.86e-12!71;UBERON:0002240!1.26e-11!6;UBERON:0005174!1.26e-11!6;UBERON:0001137!1.26e-11!6;UBERON:0004121!2.11e-11!102;UBERON:0000924!2.11e-11!102;UBERON:0006601!2.11e-11!102;UBERON:0002298!8.90e-11!6;UBERON:0001948!5.13e-10!5;UBERON:0002315!5.13e-10!5;UBERON:0000033!8.20e-10!63;UBERON:0003080!5.00e-09!40;UBERON:0002420!1.26e-08!8;UBERON:0007245!1.26e-08!8;UBERON:0010009!1.26e-08!8;UBERON:0010011!1.26e-08!8;UBERON:0000454!1.26e-08!8;UBERON:0002780!4.21e-08!39;UBERON:0001890!4.21e-08!39;UBERON:0006240!4.21e-08!39;UBERON:0002791!8.25e-08!29;UBERON:0003528!8.25e-08!29;UBERON:0001893!8.25e-08!29;UBERON:0002950!1.07e-07!4;UBERON:0001891!1.07e-07!4;UBERON:0009616!1.07e-07!4;UBERON:0002257!9.73e-07!3 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002420,5.27e-14,8;UBERON:0007245,5.27e-14,8;UBERON:0010009,5.27e-14,8;UBERON:0010011,5.27e-14,8;UBERON:0000454,5.27e-14,8;UBERON:0000369,4.18e-13,5;UBERON:0002435,4.18e-13,5;UBERON:0000204,4.18e-13,5;UBERON:0010082,4.18e-13,5;UBERON:0001017,2.57e-10,73;UBERON:0001016,5.20e-10,75;UBERON:0002257,7.57e-10,3;UBERON:0004121,1.20e-07,95;UBERON:0000924,1.20e-07,95;UBERON:0006601,1.20e-07,95;UBERON:0000073,2.47e-07,54;UBERON:0002020,6.38e-07,34 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255129870453209,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.06949382578793,5.81890077199236,5.07065122804943,0,0,0,0,0,0,0,0.207379224616955,0.540023753326763,0.210324961351382,0.856952953211411,0.662605622854841,0.122490799214954,0.0958454710182364,0.919218786610021,0,0.893811366596314,1.38245879930619,2.90149833006426,3.01909223887952,4.16730696445408,0.279182999001381,1.12552522006336,0.45839474333043,0.589257170947335,1.85083185038834,1.1183966749518,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.17112318804619,0.41889341362691,0,0,0,0,0.599162557619291,0,0,0,0,0.62336413367868,0.324482526135515,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.411618449517138,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.642202359951168,0.586058432961016,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129358683782755,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.741701208042039,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103787347584177,0.798049746802062,1.02440163452481,0.243106717068294,0.209613162627982,0,0,0,0,1.01078884705519,0.50695859978048,0.754505365544305,0,0.192075457214608,0.17230640686684,0.476293691283074,0.115884325944855,0,0,0,0,0.177475806159338,0,0.290692833264657,0,0.0846146078916765,0,0,0.135804113845862,0,0,0,0,0.154936841185966,0,0.749431733813838,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255129870453209,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.06949382578793,5.81890077199236,5.07065122804943,0,0,0,0,0,0,0,0.207379224616955,0.540023753326763,0.210324961351382,0.856952953211411,0.662605622854841,0.122490799214954,0.0958454710182364,0.919218786610021,0,0.893811366596314,1.38245879930619,2.90149833006426,3.01909223887952,4.16730696445408,0.279182999001381,1.12552522006336,0.45839474333043,0.589257170947335,1.85083185038834,1.1183966749518,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.17112318804619,0.41889341362691,0,0,0,0,0.599162557619291,0,0,0,0,0.62336413367868,0.324482526135515,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.411618449517138,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.642202359951168,0.586058432961016,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129358683782755,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.741701208042039,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103787347584177,0.798049746802062,1.02440163452481,0.243106717068294,0.209613162627982,0,0,0,0,1.01078884705519,0.50695859978048,0.754505365544305,0,0.192075457214608,0.17230640686684,0.476293691283074,0.115884325944855,0,0,0,0,0.177475806159338,0,0.290692833264657,0,0.0846146078916765,0,0,0.135804113845862,0,0,0,0,0.154936841185966,0,0.749431733813838,0,0,0,0,0 | ||
|short_description=p@chr5:120881766..120881780,- | |short_description=p@chr5:120881766..120881780,- | ||
}} | }} |
Revision as of 22:21, 14 November 2012
Short description: | p@chr5:120881766..120881780, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr5:120881766..120881780, - |
Coexpression cluster: | MCL_coexpression_mm9:224 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 6.15e-29 | 23 |
neuroblast (sensu Vertebrata) | 6.15e-29 | 23 |
granule cell | 4.98e-22 | 3 |
striatum neuron | 2.08e-21 | 3 |
neuron | 6.54e-20 | 33 |
neuronal stem cell | 6.54e-20 | 33 |
neuroblast | 6.54e-20 | 33 |
electrically signaling cell | 6.54e-20 | 33 |
electrically responsive cell | 1.05e-16 | 39 |
electrically active cell | 1.05e-16 | 39 |
neural cell | 4.58e-15 | 43 |
ectodermal cell | 1.06e-14 | 44 |
neurectodermal cell | 1.06e-14 | 44 |
neuron of the ventral spinal cord | 7.57e-10 | 3 |
embryonic cell | 7.37e-09 | 70 |
Ontology term | p-value | n |
---|---|---|
basal ganglion | 5.27e-14 | 8 |
nuclear complex of neuraxis | 5.27e-14 | 8 |
aggregate regional part of brain | 5.27e-14 | 8 |
collection of basal ganglia | 5.27e-14 | 8 |
cerebral subcortex | 5.27e-14 | 8 |
corpus striatum | 4.18e-13 | 5 |
striatum | 4.18e-13 | 5 |
ventral part of telencephalon | 4.18e-13 | 5 |
future corpus striatum | 4.18e-13 | 5 |
central nervous system | 2.57e-10 | 73 |
nervous system | 5.20e-10 | 75 |
ventral horn of spinal cord | 7.57e-10 | 3 |
ectoderm-derived structure | 1.20e-07 | 95 |
ectoderm | 1.20e-07 | 95 |
presumptive ectoderm | 1.20e-07 | 95 |
regional part of nervous system | 2.47e-07 | 54 |
gray matter | 6.38e-07 | 34 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.