FFCP PHASE1:Hg19::chr7:192282..192299,+: Difference between revisions
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|ontology_enrichment_celltype=CL:0000055!7.59e-37!180;CL:0000057!3.63e-16!75;CL:0000133!6.65e-13!59;CL:0002319!4.54e-10!25;CL:0000393!1.18e-09!60;CL:0000211!1.18e-09!60;CL:0000333!6.23e-09!41;CL:0000183!4.39e-08!59;CL:0000221!6.26e-08!71;CL:0000680!2.61e-07!57;CL:0000056!2.61e-07!57;CL:0000355!2.61e-07!57;CL:0000187!3.67e-07!54;CL:0000188!7.50e-07!9 | |ontology_enrichment_celltype=CL:0000055!7.59e-37!180;CL:0000057!3.63e-16!75;CL:0000133!6.65e-13!59;CL:0002319!4.54e-10!25;CL:0000393!1.18e-09!60;CL:0000211!1.18e-09!60;CL:0000333!6.23e-09!41;CL:0000183!4.39e-08!59;CL:0000221!6.26e-08!71;CL:0000680!2.61e-07!57;CL:0000056!2.61e-07!57;CL:0000355!2.61e-07!57;CL:0000187!3.67e-07!54;CL:0000188!7.50e-07!9 | ||
|ontology_enrichment_celltype_v019=CL:0002319;3.12e-09;25!CL:0000188;2.10e-08;9!CL:0000057;5.59e-08;73 | |ontology_enrichment_celltype_v019=CL:0002319;3.12e-09;25!CL:0000188;2.10e-08;9!CL:0000057;5.59e-08;73 | ||
|ontology_enrichment_celltype_v019_2=CL:0000057,2.14e-17,76;CL:0000133,3.92e-11,59;CL:0002319,3.13e-09,25;CL:0000188,1.91e-08,9;CL:0000393,3.43e-08,61;CL:0000211,3.43e-08,61;CL:0000221,5.46e-08,72;CL:0000333,2.19e-07,41;CL:0000047,3.17e-07,8 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000475!2.92e-16!365;UBERON:0000481!1.13e-13!347;UBERON:0000073!1.26e-12!94;UBERON:0001016!1.26e-12!94;UBERON:0004121!3.58e-12!169;UBERON:0005743!6.57e-12!86;UBERON:0000924!1.29e-11!173;UBERON:0006601!1.29e-11!173;UBERON:0001017!2.04e-11!82;UBERON:0000914!6.31e-11!83;UBERON:0002329!6.31e-11!83;UBERON:0003077!6.31e-11!83;UBERON:0003059!6.31e-11!83;UBERON:0007282!6.31e-11!83;UBERON:0009618!6.31e-11!83;UBERON:0007285!6.31e-11!83;UBERON:0000033!3.68e-10!123;UBERON:0004290!1.89e-09!70;UBERON:0000468!1.91e-09!659;UBERON:0000119!6.87e-09!312;UBERON:0000153!7.09e-09!129;UBERON:0007811!7.09e-09!129;UBERON:0005256!5.00e-08!143;UBERON:0000483!5.19e-08!309;UBERON:0003075!7.56e-08!86;UBERON:0007284!7.56e-08!86;UBERON:0000955!1.01e-07!69;UBERON:0006238!1.01e-07!69;UBERON:0000922!1.11e-07!612;UBERON:0000477!2.92e-07!286;UBERON:0002346!3.15e-07!90;UBERON:0002200!6.80e-07!11;UBERON:0006876!6.80e-07!11;UBERON:0002385!7.95e-07!63;UBERON:0001015!7.95e-07!63;UBERON:0000383!7.95e-07!63;UBERON:0000486!8.58e-07!82;UBERON:0001134!8.92e-07!61;UBERON:0002036!8.92e-07!61;UBERON:0003082!8.92e-07!61 | |ontology_enrichment_uberon=UBERON:0000475!2.92e-16!365;UBERON:0000481!1.13e-13!347;UBERON:0000073!1.26e-12!94;UBERON:0001016!1.26e-12!94;UBERON:0004121!3.58e-12!169;UBERON:0005743!6.57e-12!86;UBERON:0000924!1.29e-11!173;UBERON:0006601!1.29e-11!173;UBERON:0001017!2.04e-11!82;UBERON:0000914!6.31e-11!83;UBERON:0002329!6.31e-11!83;UBERON:0003077!6.31e-11!83;UBERON:0003059!6.31e-11!83;UBERON:0007282!6.31e-11!83;UBERON:0009618!6.31e-11!83;UBERON:0007285!6.31e-11!83;UBERON:0000033!3.68e-10!123;UBERON:0004290!1.89e-09!70;UBERON:0000468!1.91e-09!659;UBERON:0000119!6.87e-09!312;UBERON:0000153!7.09e-09!129;UBERON:0007811!7.09e-09!129;UBERON:0005256!5.00e-08!143;UBERON:0000483!5.19e-08!309;UBERON:0003075!7.56e-08!86;UBERON:0007284!7.56e-08!86;UBERON:0000955!1.01e-07!69;UBERON:0006238!1.01e-07!69;UBERON:0000922!1.11e-07!612;UBERON:0000477!2.92e-07!286;UBERON:0002346!3.15e-07!90;UBERON:0002200!6.80e-07!11;UBERON:0006876!6.80e-07!11;UBERON:0002385!7.95e-07!63;UBERON:0001015!7.95e-07!63;UBERON:0000383!7.95e-07!63;UBERON:0000486!8.58e-07!82;UBERON:0001134!8.92e-07!61;UBERON:0002036!8.92e-07!61;UBERON:0003082!8.92e-07!61 | ||
|ontology_enrichment_uberon_v019=UBERON:0006876;1.60e-07;11 | |ontology_enrichment_uberon_v019=UBERON:0006876;1.60e-07;11 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0010314,1.22e-13,132;UBERON:0004121,1.69e-10,171;UBERON:0000924,1.69e-10,171;UBERON:0006601,1.69e-10,171;UBERON:0001016,3.86e-09,89;UBERON:0001017,3.40e-08,81;UBERON:0007503,9.55e-08,78;UBERON:0002329,9.72e-08,71;UBERON:0003059,9.72e-08,71;UBERON:0007282,9.72e-08,71;UBERON:0004290,9.72e-08,71;UBERON:0009618,9.72e-08,71;UBERON:0007524,1.11e-07,73;UBERON:0006876,1.41e-07,11;UBERON:0003077,1.84e-07,72;UBERON:0007285,1.84e-07,72;UBERON:0000119,6.85e-07,309 | |||
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| ||
|short_description=p@chr7:192282..192299,+ | |short_description=p@chr7:192282..192299,+ | ||
}} | }} |
Revision as of 05:52, 16 November 2012
Short description: | p@chr7:192282..192299, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr7:192282..192299, + |
Coexpression cluster: | C4671_Astrocyte_Meningeal_Hair_Pericytes_Skeletal_glioblastoma_normal |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 2.14e-17 | 76 |
neurectodermal cell | 3.92e-11 | 59 |
neural cell | 3.13e-09 | 25 |
cell of skeletal muscle | 1.91e-08 | 9 |
electrically responsive cell | 3.43e-08 | 61 |
electrically active cell | 3.43e-08 | 61 |
ectodermal cell | 5.46e-08 | 72 |
migratory neural crest cell | 2.19e-07 | 41 |
neuronal stem cell | 3.17e-07 | 8 |
Ontology term | p-value | n |
---|---|---|
structure with developmental contribution from neural crest | 1.22e-13 | 132 |
ectoderm-derived structure | 1.69e-10 | 171 |
ectoderm | 1.69e-10 | 171 |
presumptive ectoderm | 1.69e-10 | 171 |
nervous system | 3.86e-09 | 89 |
central nervous system | 3.40e-08 | 81 |
epithelial vesicle | 9.55e-08 | 78 |
somite | 9.72e-08 | 71 |
presomitic mesoderm | 9.72e-08 | 71 |
presumptive segmental plate | 9.72e-08 | 71 |
dermomyotome | 9.72e-08 | 71 |
trunk paraxial mesoderm | 9.72e-08 | 71 |
dense mesenchyme tissue | 1.11e-07 | 73 |
vasculature of organ | 1.41e-07 | 11 |
paraxial mesoderm | 1.84e-07 | 72 |
presumptive paraxial mesoderm | 1.84e-07 | 72 |
cell layer | 6.85e-07 | 309 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.