FFCP PHASE1:Hg19::chr6:170122964..170122975,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 9: | Line 9: | ||
|ontology_enrichment_celltype=CL:0000738!2.70e-21!140;CL:0000624!2.24e-19!6;CL:0000838!1.17e-15!52;CL:0000037!1.37e-15!172;CL:0000566!1.37e-15!172;CL:0000988!2.46e-15!182;CL:0000542!2.83e-15!53;CL:0000051!2.83e-15!53;CL:0002031!4.04e-15!124;CL:0002087!1.29e-14!119;CL:0000791!1.88e-13!18;CL:0000789!1.88e-13!18;CL:0002420!1.88e-13!18;CL:0002419!1.88e-13!18;CL:0000790!1.88e-13!18;CL:0002032!2.99e-12!165;CL:0000837!2.99e-12!165;CL:0000084!2.99e-11!25;CL:0000827!2.99e-11!25;CL:0000623!6.21e-11!3;CL:0000825!6.21e-11!3;CL:0000898!3.79e-10!3;CL:0000842!3.91e-10!3;CL:0000080!9.34e-09!6;CL:0000224!1.08e-07!4;CL:0000815!2.83e-07!2;CL:0000792!2.83e-07!2;CL:0002677!2.83e-07!2 | |ontology_enrichment_celltype=CL:0000738!2.70e-21!140;CL:0000624!2.24e-19!6;CL:0000838!1.17e-15!52;CL:0000037!1.37e-15!172;CL:0000566!1.37e-15!172;CL:0000988!2.46e-15!182;CL:0000542!2.83e-15!53;CL:0000051!2.83e-15!53;CL:0002031!4.04e-15!124;CL:0002087!1.29e-14!119;CL:0000791!1.88e-13!18;CL:0000789!1.88e-13!18;CL:0002420!1.88e-13!18;CL:0002419!1.88e-13!18;CL:0000790!1.88e-13!18;CL:0002032!2.99e-12!165;CL:0000837!2.99e-12!165;CL:0000084!2.99e-11!25;CL:0000827!2.99e-11!25;CL:0000623!6.21e-11!3;CL:0000825!6.21e-11!3;CL:0000898!3.79e-10!3;CL:0000842!3.91e-10!3;CL:0000080!9.34e-09!6;CL:0000224!1.08e-07!4;CL:0000815!2.83e-07!2;CL:0000792!2.83e-07!2;CL:0002677!2.83e-07!2 | ||
|ontology_enrichment_celltype_v019=CL:0000623;6.12e-46;3!CL:0000791;2.49e-30;18!CL:0000789;2.49e-30;18!CL:0002419;2.49e-30;18!CL:0000624;2.21e-23;6!CL:0000084;8.14e-22;25!CL:0000542;4.14e-14;53!CL:0000097;2.44e-13;5!CL:0000625;2.77e-13;11!CL:0000163;8.17e-08;9 | |ontology_enrichment_celltype_v019=CL:0000623;6.12e-46;3!CL:0000791;2.49e-30;18!CL:0000789;2.49e-30;18!CL:0002419;2.49e-30;18!CL:0000624;2.21e-23;6!CL:0000084;8.14e-22;25!CL:0000542;4.14e-14;53!CL:0000097;2.44e-13;5!CL:0000625;2.77e-13;11!CL:0000163;8.17e-08;9 | ||
|ontology_enrichment_celltype_v019_2=CL:0000623,7.74e-46,3;CL:0000825,7.74e-46,3;CL:0000791,1.93e-30,18;CL:0000789,1.93e-30,18;CL:0002420,1.93e-30,18;CL:0002419,1.93e-30,18;CL:0000790,1.93e-30,18;CL:0000838,2.20e-28,52;CL:0000542,7.80e-28,53;CL:0000051,7.80e-28,53;CL:0000624,2.13e-23,6;CL:0000084,6.79e-22,25;CL:0000827,6.79e-22,25;CL:0002031,3.00e-20,120;CL:0000738,9.17e-18,136;CL:0002087,6.87e-15,115;CL:0002032,7.41e-15,161;CL:0000837,7.41e-15,161;CL:0000037,3.40e-14,168;CL:0000988,2.02e-13,177;CL:0000097,2.09e-13,5;CL:0002028,2.09e-13,5;CL:0000625,2.30e-13,11;CL:0000163,7.51e-08,9 | |||
|ontology_enrichment_development_v019=CL:0000790;2.49e-30;18!CL:0000051;4.14e-14;53 | |ontology_enrichment_development_v019=CL:0000790;2.49e-30;18!CL:0000051;4.14e-14;53 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |ontology_enrichment_uberon= | ||
|ontology_enrichment_uberon_v019= | |ontology_enrichment_uberon_v019= | ||
|ontology_enrichment_uberon_v019_2= | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.393364276848904,0,0.154816123316076,0,0,0,0,0,0,1.10799081706375,0.601633342410425,0.868043482863407,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.569212969109448,1.17447437874188,0.382273228125229,0,0.560508562981536,0,1.57367816091066,1.17903228824749,1.64481199199607,0.167186495390678,0.32592226663359,0,0,0,0.294605907474837,0.221533894583621,0,0,0,0,0,0.289803085735052,0.14828656316206,0,0,0,0.383220493601921,0,0,0,0,0,0,0,0,0,0,2.41928091869679,2.13952156626806,1.88271725047639,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.174129737299267,0,0.238490624305342,0,0.371457501329565,0,0,0,0,0,0,0,0,0,0,0.402829317109147,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.190254152234598,0,0,0,0,0,0,0,0,0,0,0,0,0,3.31724984865235,1.72943944100354,0.88369703398466,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.77327684181734,1.2937654491571,1.02674429023799,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206768026122887,0.647142602455851,0.320182673410333,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127612712494584,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.166849141711909,0,0,0,0,0,0,0,0,0,0,0.284136146806413,0,0,0,0,0,0,0,0,0.19924798825107,0,0,0,0.123084805461069,0,0.0898683511473268,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.889563386041866,0,0,0,0,0,0,0,0,0,0,0,0,0.150323419414493,0,0,0,0,0,0,0,0,0.0979923974143777,0,0,0,0.0967563312890851,0.0730893170861856,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.14405479798815,0,0,0.135904206073614,0,0,0,0,0,0,0,0,0,0,0.717873024576814,0,0,0,0,0,0,0,0.0824158583811665,0.0674035438541849,0,0,0,0,0.160753148465019,0.137539436597234,0,0.2249738915515,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121792598380896,0,0,0,0.306345576763462,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.159296767163702,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132864840313363,0,0,0,0,0.19998739585493,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0788617450012534,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.690359926060101,0,0,0,0,0,0,0.147856086217045,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.098150233615243,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.178553938605658,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0620747142958579,0,0,0,0,0,0,0,0,0.162806537221949,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.393364276848904,0,0.154816123316076,0,0,0,0,0,0,1.10799081706375,0.601633342410425,0.868043482863407,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.569212969109448,1.17447437874188,0.382273228125229,0,0.560508562981536,0,1.57367816091066,1.17903228824749,1.64481199199607,0.167186495390678,0.32592226663359,0,0,0,0.294605907474837,0.221533894583621,0,0,0,0,0,0.289803085735052,0.14828656316206,0,0,0,0.383220493601921,0,0,0,0,0,0,0,0,0,0,2.41928091869679,2.13952156626806,1.88271725047639,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.174129737299267,0,0.238490624305342,0,0.371457501329565,0,0,0,0,0,0,0,0,0,0,0.402829317109147,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.190254152234598,0,0,0,0,0,0,0,0,0,0,0,0,0,3.31724984865235,1.72943944100354,0.88369703398466,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.77327684181734,1.2937654491571,1.02674429023799,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206768026122887,0.647142602455851,0.320182673410333,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127612712494584,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.166849141711909,0,0,0,0,0,0,0,0,0,0,0.284136146806413,0,0,0,0,0,0,0,0,0.19924798825107,0,0,0,0.123084805461069,0,0.0898683511473268,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.889563386041866,0,0,0,0,0,0,0,0,0,0,0,0,0.150323419414493,0,0,0,0,0,0,0,0,0.0979923974143777,0,0,0,0.0967563312890851,0.0730893170861856,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.14405479798815,0,0,0.135904206073614,0,0,0,0,0,0,0,0,0,0,0.717873024576814,0,0,0,0,0,0,0,0.0824158583811665,0.0674035438541849,0,0,0,0,0.160753148465019,0.137539436597234,0,0.2249738915515,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121792598380896,0,0,0,0.306345576763462,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.159296767163702,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132864840313363,0,0,0,0,0.19998739585493,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0788617450012534,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.690359926060101,0,0,0,0,0,0,0.147856086217045,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.098150233615243,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.178553938605658,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0620747142958579,0,0,0,0,0,0,0,0,0.162806537221949,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr6:170122964..170122975,+ | |short_description=p@chr6:170122964..170122975,+ | ||
}} | }} |
Revision as of 06:59, 17 November 2012
Short description: | p@chr6:170122964..170122975, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr6:170122964..170122975, + |
Coexpression cluster: | C722_Mast_Natural_CD8_CD4_CD19_mature_Basophils |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
natural killer cell | 7.74e-46 | 3 |
pro-NK cell | 7.74e-46 | 3 |
mature alpha-beta T cell | 1.93e-30 | 18 |
alpha-beta T cell | 1.93e-30 | 18 |
immature T cell | 1.93e-30 | 18 |
mature T cell | 1.93e-30 | 18 |
immature alpha-beta T cell | 1.93e-30 | 18 |
lymphoid lineage restricted progenitor cell | 2.20e-28 | 52 |
lymphocyte | 7.80e-28 | 53 |
common lymphoid progenitor | 7.80e-28 | 53 |
CD4-positive, alpha-beta T cell | 2.13e-23 | 6 |
T cell | 6.79e-22 | 25 |
pro-T cell | 6.79e-22 | 25 |
hematopoietic lineage restricted progenitor cell | 3.00e-20 | 120 |
leukocyte | 9.17e-18 | 136 |
nongranular leukocyte | 6.87e-15 | 115 |
hematopoietic oligopotent progenitor cell | 7.41e-15 | 161 |
hematopoietic multipotent progenitor cell | 7.41e-15 | 161 |
hematopoietic stem cell | 3.40e-14 | 168 |
hematopoietic cell | 2.02e-13 | 177 |
mast cell | 2.09e-13 | 5 |
basophil mast progenitor cell | 2.09e-13 | 5 |
CD8-positive, alpha-beta T cell | 2.30e-13 | 11 |
endocrine cell | 7.51e-08 | 9 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.