FFCP PHASE1:Hg19::chr10:3851660..3851677,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 9: | Line 9: | ||
|ontology_enrichment_celltype=CL:0002274!4.08e-23!5;CL:0000457!4.08e-23!5;CL:0002191!4.08e-23!5;CL:0000097!4.08e-23!5;CL:0000831!4.08e-23!5;CL:0002028!4.08e-23!5;CL:0000163!7.19e-18!9;CL:0000623!1.94e-15!3;CL:0000825!1.94e-15!3;CL:0000738!1.07e-14!140;CL:0002031!2.52e-14!124;CL:0000037!4.93e-12!172;CL:0000566!4.93e-12!172;CL:0000988!4.74e-11!182;CL:0000084!8.33e-11!25;CL:0000827!8.33e-11!25;CL:0002087!8.90e-11!119;CL:0002032!1.56e-10!165;CL:0000837!1.56e-10!165;CL:0000791!4.58e-09!18;CL:0000789!4.58e-09!18;CL:0002420!4.58e-09!18;CL:0002419!4.58e-09!18;CL:0000790!4.58e-09!18;CL:0000838!7.89e-09!52;CL:0000542!1.27e-08!53;CL:0000051!1.27e-08!53;CL:0000624!1.07e-07!6;CL:0000839!7.18e-07!70;CL:0000557!9.64e-07!71 | |ontology_enrichment_celltype=CL:0002274!4.08e-23!5;CL:0000457!4.08e-23!5;CL:0002191!4.08e-23!5;CL:0000097!4.08e-23!5;CL:0000831!4.08e-23!5;CL:0002028!4.08e-23!5;CL:0000163!7.19e-18!9;CL:0000623!1.94e-15!3;CL:0000825!1.94e-15!3;CL:0000738!1.07e-14!140;CL:0002031!2.52e-14!124;CL:0000037!4.93e-12!172;CL:0000566!4.93e-12!172;CL:0000988!4.74e-11!182;CL:0000084!8.33e-11!25;CL:0000827!8.33e-11!25;CL:0002087!8.90e-11!119;CL:0002032!1.56e-10!165;CL:0000837!1.56e-10!165;CL:0000791!4.58e-09!18;CL:0000789!4.58e-09!18;CL:0002420!4.58e-09!18;CL:0002419!4.58e-09!18;CL:0000790!4.58e-09!18;CL:0000838!7.89e-09!52;CL:0000542!1.27e-08!53;CL:0000051!1.27e-08!53;CL:0000624!1.07e-07!6;CL:0000839!7.18e-07!70;CL:0000557!9.64e-07!71 | ||
|ontology_enrichment_celltype_v019=CL:0000623;3.60e-41;3!CL:0000791;3.61e-26;18!CL:0000789;3.61e-26;18!CL:0002419;3.61e-26;18!CL:0000097;2.37e-24;5!CL:0000624;3.26e-20;6!CL:0000084;8.61e-19;25!CL:0000163;7.86e-14;9!CL:0000625;1.27e-11;11!CL:0000542;3.68e-10;53 | |ontology_enrichment_celltype_v019=CL:0000623;3.60e-41;3!CL:0000791;3.61e-26;18!CL:0000789;3.61e-26;18!CL:0002419;3.61e-26;18!CL:0000097;2.37e-24;5!CL:0000624;3.26e-20;6!CL:0000084;8.61e-19;25!CL:0000163;7.86e-14;9!CL:0000625;1.27e-11;11!CL:0000542;3.68e-10;53 | ||
|ontology_enrichment_celltype_v019_2=CL:0000623,3.86e-41,3;CL:0000825,3.86e-41,3;CL:0000791,3.09e-26,18;CL:0000789,3.09e-26,18;CL:0002420,3.09e-26,18;CL:0002419,3.09e-26,18;CL:0000790,3.09e-26,18;CL:0000097,1.79e-24,5;CL:0002028,1.79e-24,5;CL:0000624,2.77e-20,6;CL:0002031,5.10e-20,120;CL:0000838,7.22e-20,52;CL:0000542,1.78e-19,53;CL:0000051,1.78e-19,53;CL:0000084,7.72e-19,25;CL:0000827,7.72e-19,25;CL:0000738,1.65e-17,136;CL:0002032,1.42e-14,161;CL:0000837,1.42e-14,161;CL:0000037,6.61e-14,168;CL:0000163,6.74e-14,9;CL:0000988,4.00e-13,177;CL:0002087,1.30e-12,115;CL:0000625,1.23e-11,11;CL:0000134,8.46e-07,354 | |||
|ontology_enrichment_development_v019=CL:0000790;3.61e-26;18!CL:0000051;3.68e-10;53 | |ontology_enrichment_development_v019=CL:0000790;3.61e-26;18!CL:0000051;3.68e-10;53 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |ontology_enrichment_uberon= | ||
|ontology_enrichment_uberon_v019= | |ontology_enrichment_uberon_v019= | ||
|ontology_enrichment_uberon_v019_2= | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.601633342410425,1.51907609501096,0,0,0,0,0,0,0,0,0,0,0,0,0.344745680736619,0.645484683583826,0,0,0,0,0.306083892370903,0,1.27867425159808,0,0,0,0,0,0,0,0,0,0,0,0.316462387440884,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.57367816091066,1.96505381374582,1.43921049299656,0,0,0,0,0,0,0,0,0,0,0,0,0,0.14828656316206,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.21767417547206,4.81392352410313,2.75166367377318,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132409180813219,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.590789906681404,0,0.122988438543114,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.492663237895943,0.088048434013226,3.10992173311158,1.58531948758658,1.8936365013957,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.15249216323084,4.52817907204986,4.62034930607094,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206768026122887,0,0.106727557803444,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.105551628892876,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23874448473769,0,0.307160702099232,0,0,0,0.16480387422676,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.06606955203727,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.063186579628488,0,0.103688191397247,0,0,0,0,0,0,0.173559738335131,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0801588202515337,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.262887354279314,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.25426853765475,0,0,0,0,0.246277562248017,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.192619830407303,0,0,0,0,0.244736704506468,0,0,0,0,0.192914038270915,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.118193840883968,0,0,0,0,0,0,0,0,0,0,0,0,0.414432328326074,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150962843566674,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.601633342410425,1.51907609501096,0,0,0,0,0,0,0,0,0,0,0,0,0.344745680736619,0.645484683583826,0,0,0,0,0.306083892370903,0,1.27867425159808,0,0,0,0,0,0,0,0,0,0,0,0.316462387440884,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.57367816091066,1.96505381374582,1.43921049299656,0,0,0,0,0,0,0,0,0,0,0,0,0,0.14828656316206,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.21767417547206,4.81392352410313,2.75166367377318,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132409180813219,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.590789906681404,0,0.122988438543114,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.492663237895943,0.088048434013226,3.10992173311158,1.58531948758658,1.8936365013957,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.15249216323084,4.52817907204986,4.62034930607094,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206768026122887,0,0.106727557803444,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.105551628892876,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23874448473769,0,0.307160702099232,0,0,0,0.16480387422676,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.06606955203727,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.063186579628488,0,0.103688191397247,0,0,0,0,0,0,0.173559738335131,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0801588202515337,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.262887354279314,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.25426853765475,0,0,0,0,0.246277562248017,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.192619830407303,0,0,0,0,0.244736704506468,0,0,0,0,0.192914038270915,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.118193840883968,0,0,0,0,0,0,0,0,0,0,0,0,0.414432328326074,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150962843566674,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr10:3851660..3851677,- | |short_description=p@chr10:3851660..3851677,- | ||
}} | }} |
Revision as of 21:23, 17 November 2012
Short description: | p@chr10:3851660..3851677, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr10:3851660..3851677, - |
Coexpression cluster: | C8_Natural_CD8_Basophils_CD4_CD14_Peripheral_CD34 |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
natural killer cell | 3.86e-41 | 3 |
pro-NK cell | 3.86e-41 | 3 |
mature alpha-beta T cell | 3.09e-26 | 18 |
alpha-beta T cell | 3.09e-26 | 18 |
immature T cell | 3.09e-26 | 18 |
mature T cell | 3.09e-26 | 18 |
immature alpha-beta T cell | 3.09e-26 | 18 |
mast cell | 1.79e-24 | 5 |
basophil mast progenitor cell | 1.79e-24 | 5 |
CD4-positive, alpha-beta T cell | 2.77e-20 | 6 |
hematopoietic lineage restricted progenitor cell | 5.10e-20 | 120 |
lymphoid lineage restricted progenitor cell | 7.22e-20 | 52 |
lymphocyte | 1.78e-19 | 53 |
common lymphoid progenitor | 1.78e-19 | 53 |
T cell | 7.72e-19 | 25 |
pro-T cell | 7.72e-19 | 25 |
leukocyte | 1.65e-17 | 136 |
hematopoietic oligopotent progenitor cell | 1.42e-14 | 161 |
hematopoietic multipotent progenitor cell | 1.42e-14 | 161 |
hematopoietic stem cell | 6.61e-14 | 168 |
endocrine cell | 6.74e-14 | 9 |
hematopoietic cell | 4.00e-13 | 177 |
nongranular leukocyte | 1.30e-12 | 115 |
CD8-positive, alpha-beta T cell | 1.23e-11 | 11 |
mesenchymal cell | 8.46e-07 | 354 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.