FFCP PHASE1:Hg19::chr5:1883489..1883503,-: Difference between revisions
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|ontology_enrichment_celltype=CL:0000039!1.61e-16!7;CL:0000586!1.61e-16!7;CL:0000312!1.62e-11!5;CL:0002251!1.85e-11!21;CL:0000362!7.72e-11!8;CL:0000240!1.35e-09!6;CL:0000311!1.35e-09!6;CL:0000079!1.35e-09!6;CL:0000237!1.35e-09!6;CL:0000036!1.35e-09!6;CL:0000357!1.35e-09!6;CL:0000114!1.35e-09!6;CL:0000076!3.70e-09!62;CL:0000066!5.51e-09!254;CL:0002327!2.31e-08!4 | |ontology_enrichment_celltype=CL:0000039!1.61e-16!7;CL:0000586!1.61e-16!7;CL:0000312!1.62e-11!5;CL:0002251!1.85e-11!21;CL:0000362!7.72e-11!8;CL:0000240!1.35e-09!6;CL:0000311!1.35e-09!6;CL:0000079!1.35e-09!6;CL:0000237!1.35e-09!6;CL:0000036!1.35e-09!6;CL:0000357!1.35e-09!6;CL:0000114!1.35e-09!6;CL:0000076!3.70e-09!62;CL:0000066!5.51e-09!254;CL:0002327!2.31e-08!4 | ||
|ontology_enrichment_celltype_v019=CL:0000312;7.22e-17;5!CL:0000240;3.14e-14;6!CL:0000311;3.14e-14;6!CL:0000079;3.14e-14;6!CL:0000237;3.14e-14;6!CL:0000123;2.23e-11;2!CL:0002535;2.23e-11;2!CL:0000242;2.23e-11;2!CL:0000362;8.27e-10;9 | |ontology_enrichment_celltype_v019=CL:0000312;7.22e-17;5!CL:0000240;3.14e-14;6!CL:0000311;3.14e-14;6!CL:0000079;3.14e-14;6!CL:0000237;3.14e-14;6!CL:0000123;2.23e-11;2!CL:0002535;2.23e-11;2!CL:0000242;2.23e-11;2!CL:0000362;8.27e-10;9 | ||
|ontology_enrichment_celltype_v019_2=CL:0000312,8.14e-17,5;CL:0000240,3.48e-14,6;CL:0000311,3.48e-14,6;CL:0000079,3.48e-14,6;CL:0000237,3.48e-14,6;CL:0000036,3.48e-14,6;CL:0000357,3.48e-14,6;CL:0000114,3.48e-14,6;CL:0000242,2.02e-11,2;CL:0002535,2.23e-11,2;CL:0000362,8.84e-10,9;CL:0000076,4.93e-08,63 | |||
|ontology_enrichment_development_v019=CL:0000357;3.14e-14;6!CL:0000114;3.14e-14;6!UBERON:0008814;1.82e-11;2!UBERON:0010056;1.82e-11;2 | |ontology_enrichment_development_v019=CL:0000357;3.14e-14;6!CL:0000114;3.14e-14;6!UBERON:0008814;1.82e-11;2!UBERON:0010056;1.82e-11;2 | ||
|ontology_enrichment_disease=DOID:1749!4.98e-15!14;DOID:305!8.03e-09!106;DOID:5093!1.85e-08!4;DOID:1612!1.85e-08!4;DOID:0050687!1.90e-08!143 | |ontology_enrichment_disease=DOID:1749!4.98e-15!14;DOID:305!8.03e-09!106;DOID:5093!1.85e-08!4;DOID:1612!1.85e-08!4;DOID:0050687!1.90e-08!143 | ||
|ontology_enrichment_disease_v019=DOID:1749;1.64e-13;14 | |ontology_enrichment_disease_v019=DOID:1749;1.64e-13;14 | ||
|ontology_enrichment_disease_v019_2=DOID:1749,1.54e-13,14 | |||
|ontology_enrichment_uberon=UBERON:0003343!1.14e-08!4;UBERON:0004785!1.14e-08!4;UBERON:0001003!1.93e-08!14;UBERON:0007376!1.93e-08!14;UBERON:0007383!1.93e-08!14;UBERON:0001911!2.31e-08!4;UBERON:0005333!2.31e-08!4;UBERON:0008425!2.31e-08!4;UBERON:0005311!2.31e-08!4;UBERON:0003729!5.33e-07!5 | |ontology_enrichment_uberon=UBERON:0003343!1.14e-08!4;UBERON:0004785!1.14e-08!4;UBERON:0001003!1.93e-08!14;UBERON:0007376!1.93e-08!14;UBERON:0007383!1.93e-08!14;UBERON:0001911!2.31e-08!4;UBERON:0005333!2.31e-08!4;UBERON:0008425!2.31e-08!4;UBERON:0005311!2.31e-08!4;UBERON:0003729!5.33e-07!5 | ||
|ontology_enrichment_uberon_v019=UBERON:0002331;1.83e-18;10!UBERON:0000178;1.52e-12;15!UBERON:0000179;1.52e-12;15!UBERON:0000463;1.52e-12;15!UBERON:0006955;2.23e-11;2!UBERON:0004801;2.23e-11;2!UBERON:0001723;4.52e-08;3!UBERON:0001033;4.52e-08;3!UBERON:0000478;4.52e-08;24 | |ontology_enrichment_uberon_v019=UBERON:0002331;1.83e-18;10!UBERON:0000178;1.52e-12;15!UBERON:0000179;1.52e-12;15!UBERON:0000463;1.52e-12;15!UBERON:0006955;2.23e-11;2!UBERON:0004801;2.23e-11;2!UBERON:0001723;4.52e-08;3!UBERON:0001033;4.52e-08;3!UBERON:0000478;4.52e-08;24 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002331,1.63e-18,10;UBERON:0000358,1.63e-18,10;UBERON:0000307,1.63e-18,10;UBERON:0000091,1.63e-18,10;UBERON:0000087,1.63e-18,10;UBERON:0007010,1.63e-18,10;UBERON:0007806,1.63e-18,10;UBERON:0008780,1.63e-18,10;UBERON:0005728,1.63e-18,10;UBERON:0000178,1.41e-12,15;UBERON:0000179,1.41e-12,15;UBERON:0000463,1.41e-12,15;UBERON:0006955,2.23e-11,2;UBERON:0004801,2.23e-11,2;UBERON:0000478,4.31e-08,24;UBERON:0001723,4.52e-08,3;UBERON:0001033,4.52e-08,3;UBERON:0010056,4.52e-08,3 | |||
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|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.313454721478088,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113309342697566,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.436094052142534,0,0,0,0,0,0,0,0,0,0,0,0,0,0.234321431833797,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125118519871964,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.10075209822764,0,0,0.272746120590835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.439001141634502,1.1240175325762,0.201057944823262,0,0,0,0,0,0,0,0,0,0,0.858486162094873,0,0,0,0,0,0,0.179117045405697,0,1.15014803749563,0,0,0,0,0.12624243342638,0,0,0,0,0.102827492703324,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184161977871793,0,0,0,0,0,0,0,0,0,0.170093705276516,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.574265537996172,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.47024129588619,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.260427761085233,0.61221999997337,0,0.341380344856499,0,0.236387681767936,0,0,0,0,0,0,0,0,0,0,0.139423744278603,0,0,0.46112780877612,0.179515288819544,1.3037684630641,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.37216902944498,1.60633120630454,1.35748534357092,0,0,0,0,0,0,0,0,0,0.063186579628488,0.450970258243478,0,0,0,0,0,0,0,0,0,2.43765778425127,0,0,0,0,0,0.0969890164884194,0,0,0,0.19871461170299,0.0633107959558787,0,0,0,0.19980960958213,0.144090417154106,0,0,0,0,0.235694034616795,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0671834724867263,0,0,0,0,0,0,0,0,0,0,0,0,0,0.77380195455795,0,0,0,0,0,0.179287339332845,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.13223260174269,0,0,0,0,0,0,0,0,0.638341257770182,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.75349954360568,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.521988583930423,0,0,0,0,0,0,0,0,0,0,0,0.607719912354764,0,0,0,0,0,0,0,0,0,0,0,0,0.139879507719444,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.353909170043221,0.917142992608395,3.23471865220947,0,0,0.198916222116275,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.383287282918786,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207216164163037,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.485710993059139,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.357107877211315,0,0,0,0,0,0.157771562193185,0,0,0,0,0,0,0,0,0,0.101988829741982,0.534434810531121,0.0918948995348449,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0673520530145875,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr5:1883489..1883503,- | |short_description=p@chr5:1883489..1883503,- | ||
}} | }} |
Revision as of 02:48, 19 November 2012
Short description: | p@chr5:1883489..1883503, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr5:1883489..1883503, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
keratinocyte | 8.14e-17 | 5 |
stratified squamous epithelial cell | 3.48e-14 | 6 |
keratin accumulating cell | 3.48e-14 | 6 |
stratified epithelial cell | 3.48e-14 | 6 |
keratinizing barrier epithelial cell | 3.48e-14 | 6 |
epithelial fate stem cell | 3.48e-14 | 6 |
stratified epithelial stem cell | 3.48e-14 | 6 |
surface ectodermal cell | 3.48e-14 | 6 |
Merkel cell | 2.02e-11 | 2 |
epithelial cell of cervix | 2.23e-11 | 2 |
epidermal cell | 8.84e-10 | 9 |
squamous epithelial cell | 4.93e-08 | 63 |
Ontology term | p-value | n |
---|---|---|
umbilical cord | 1.63e-18 | 10 |
blastocyst | 1.63e-18 | 10 |
blastula | 1.63e-18 | 10 |
bilaminar disc | 1.63e-18 | 10 |
inner cell mass | 1.63e-18 | 10 |
cleaving embryo | 1.63e-18 | 10 |
connecting stalk | 1.63e-18 | 10 |
inner cell mass derived epiblast | 1.63e-18 | 10 |
extraembryonic mesoderm | 1.63e-18 | 10 |
blood | 1.41e-12 | 15 |
haemolymphatic fluid | 1.41e-12 | 15 |
organism substance | 1.41e-12 | 15 |
uterine epithelium | 2.23e-11 | 2 |
cervix epithelium | 2.23e-11 | 2 |
extraembryonic structure | 4.31e-08 | 24 |
tongue | 4.52e-08 | 3 |
gustatory system | 4.52e-08 | 3 |
future tongue | 4.52e-08 | 3 |
Ontology term | p-value | n |
---|---|---|
squamous cell carcinoma | 1.54e-13 | 14 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.