FFCP PHASE1:Hg19::chr20:34300354..34300358,-: Difference between revisions
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|ontology_enrichment_celltype=CL:0000037!1.70e-22!172;CL:0000566!1.70e-22!172;CL:0000738!1.02e-20!140;CL:0002032!2.42e-20!165;CL:0000837!2.42e-20!165;CL:0000988!2.42e-19!182;CL:0002031!3.08e-17!124;CL:0002087!2.90e-16!119;CL:0000860!1.16e-15!45;CL:0000763!6.45e-15!112;CL:0000049!6.45e-15!112;CL:0000766!2.68e-14!76;CL:0002057!2.80e-14!42;CL:0000839!1.32e-11!70;CL:0000557!2.43e-11!71;CL:0002009!5.28e-11!65;CL:0002194!3.60e-10!63;CL:0000576!3.60e-10!63;CL:0000040!3.60e-10!63;CL:0000559!3.60e-10!63 | |ontology_enrichment_celltype=CL:0000037!1.70e-22!172;CL:0000566!1.70e-22!172;CL:0000738!1.02e-20!140;CL:0002032!2.42e-20!165;CL:0000837!2.42e-20!165;CL:0000988!2.42e-19!182;CL:0002031!3.08e-17!124;CL:0002087!2.90e-16!119;CL:0000860!1.16e-15!45;CL:0000763!6.45e-15!112;CL:0000049!6.45e-15!112;CL:0000766!2.68e-14!76;CL:0002057!2.80e-14!42;CL:0000839!1.32e-11!70;CL:0000557!2.43e-11!71;CL:0002009!5.28e-11!65;CL:0002194!3.60e-10!63;CL:0000576!3.60e-10!63;CL:0000040!3.60e-10!63;CL:0000559!3.60e-10!63 | ||
|ontology_enrichment_celltype_v019=CL:0000860;9.80e-10;33!CL:0002057;9.80e-10;33!CL:0000576;1.33e-07;48!CL:0000766;3.25e-07;69!CL:0000473;5.00e-07;39!CL:0000234;5.00e-07;39 | |ontology_enrichment_celltype_v019=CL:0000860;9.80e-10;33!CL:0002057;9.80e-10;33!CL:0000576;1.33e-07;48!CL:0000766;3.25e-07;69!CL:0000473;5.00e-07;39!CL:0000234;5.00e-07;39 | ||
|ontology_enrichment_celltype_v019_2=CL:0000037,3.81e-22,168;CL:0000738,2.84e-20,136;CL:0002032,5.56e-20,161;CL:0000837,5.56e-20,161;CL:0000988,2.18e-19,177;CL:0002031,8.90e-17,120;CL:0002087,8.46e-16,115;CL:0000763,1.19e-14,108;CL:0000049,1.19e-14,108;CL:0000860,1.83e-14,42;CL:0002057,1.83e-14,42;CL:0000766,5.69e-14,72;CL:0000473,2.48e-12,48;CL:0000234,2.48e-12,48;CL:0000839,3.05e-11,66;CL:0000557,4.49e-11,67;CL:0002009,1.22e-10,61;CL:0002194,8.56e-10,59;CL:0000576,8.56e-10,59;CL:0000040,8.56e-10,59;CL:0000559,8.56e-10,59 | |||
|ontology_enrichment_development_v019=CL:0002057;8.05e-11;42 | |ontology_enrichment_development_v019=CL:0002057;8.05e-11;42 | ||
|ontology_enrichment_disease=DOID:162!3.05e-11!235;DOID:0050687!6.97e-11!143;DOID:14566!2.96e-10!239;DOID:305!4.66e-08!106 | |ontology_enrichment_disease=DOID:162!3.05e-11!235;DOID:0050687!6.97e-11!143;DOID:14566!2.96e-10!239;DOID:305!4.66e-08!106 | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2=DOID:162,9.01e-11,235;DOID:0050687,1.20e-10,143;DOID:14566,8.33e-10,239;DOID:305,7.46e-08,106 | |||
|ontology_enrichment_uberon=UBERON:0002390!4.83e-13!102;UBERON:0003061!4.83e-13!102;UBERON:0002193!1.92e-10!112;UBERON:0001474!9.60e-09!86;UBERON:0002371!1.14e-08!80;UBERON:0000178!4.54e-07!15;UBERON:0000179!4.54e-07!15;UBERON:0000463!4.54e-07!15 | |ontology_enrichment_uberon=UBERON:0002390!4.83e-13!102;UBERON:0003061!4.83e-13!102;UBERON:0002193!1.92e-10!112;UBERON:0001474!9.60e-09!86;UBERON:0002371!1.14e-08!80;UBERON:0000178!4.54e-07!15;UBERON:0000179!4.54e-07!15;UBERON:0000463!4.54e-07!15 | ||
|ontology_enrichment_uberon_v019=UBERON:0000178;3.44e-07;15!UBERON:0000179;3.44e-07;15!UBERON:0000463;3.44e-07;15 | |ontology_enrichment_uberon_v019=UBERON:0000178;3.44e-07;15!UBERON:0000179;3.44e-07;15!UBERON:0000463;3.44e-07;15 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,7.15e-13,98;UBERON:0003061,7.15e-13,98;UBERON:0002193,2.83e-10,108;UBERON:0001474,1.60e-08,82;UBERON:0002371,1.88e-08,76;UBERON:0000178,3.78e-07,15;UBERON:0000179,3.78e-07,15;UBERON:0000463,3.78e-07,15 | |||
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| ||
|short_description=p@chr20:34300354..34300358,- | |short_description=p@chr20:34300354..34300358,- | ||
}} | }} |
Revision as of 04:13, 21 November 2012
Short description: | p@chr20:34300354..34300358, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr20:34300354..34300358, - |
Coexpression cluster: | C492_CD14_CD4_Neutrophils_CD8_Natural_CD19_Peripheral |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic stem cell | 3.81e-22 | 168 |
leukocyte | 2.84e-20 | 136 |
hematopoietic oligopotent progenitor cell | 5.56e-20 | 161 |
hematopoietic multipotent progenitor cell | 5.56e-20 | 161 |
hematopoietic cell | 2.18e-19 | 177 |
hematopoietic lineage restricted progenitor cell | 8.90e-17 | 120 |
nongranular leukocyte | 8.46e-16 | 115 |
myeloid cell | 1.19e-14 | 108 |
common myeloid progenitor | 1.19e-14 | 108 |
classical monocyte | 1.83e-14 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.83e-14 | 42 |
myeloid leukocyte | 5.69e-14 | 72 |
defensive cell | 2.48e-12 | 48 |
phagocyte | 2.48e-12 | 48 |
myeloid lineage restricted progenitor cell | 3.05e-11 | 66 |
granulocyte monocyte progenitor cell | 4.49e-11 | 67 |
macrophage dendritic cell progenitor | 1.22e-10 | 61 |
monopoietic cell | 8.56e-10 | 59 |
monocyte | 8.56e-10 | 59 |
monoblast | 8.56e-10 | 59 |
promonocyte | 8.56e-10 | 59 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 7.15e-13 | 98 |
blood island | 7.15e-13 | 98 |
hemolymphoid system | 2.83e-10 | 108 |
bone element | 1.60e-08 | 82 |
bone marrow | 1.88e-08 | 76 |
blood | 3.78e-07 | 15 |
haemolymphatic fluid | 3.78e-07 | 15 |
organism substance | 3.78e-07 | 15 |
Ontology term | p-value | n |
---|---|---|
cancer | 9.01e-11 | 235 |
cell type cancer | 1.20e-10 | 143 |
disease of cellular proliferation | 8.33e-10 | 239 |
carcinoma | 7.46e-08 | 106 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.