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Coexpression cluster:C44: Difference between revisions

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|tf_chipseq_enrich=BATF#10538;38:2.23574026112932:4.3826841135797e-06:0.000137289485944256!BCL11A#53335;43:2.94658591655822:4.40869296087417e-10:4.31123112491327e-08!CTCF#10664;102:1.32064287452573:0.00149335687932002:0.00954145963044803!EBF1#1879;108:2.32342613388757:3.94539802589067e-17:8.1272864778303e-15!ELF1#1997;122:1.25480181394811:0.00293512333054245:0.0156614389985451!IRF4#3662;45:2.38201224855914:9.5444060382598e-08:5.6316848713549e-06!MEF2A#4205;53:2.39949574447134:4.81563484558214e-09:3.88071055276044e-07!MEF2C#4208;25:2.49464701042416:3.60572293952078e-05:0.000698013156775923!NFKB1#4790;109:1.44492491120079:2.81991240645569e-05:0.000594967337005709!PAX5#5079;111:1.78821684531579:3.80555088093323e-10:3.77443426831705e-08!POLR2A#5430;220:1.14115869285695:0.00425133714032151:0.0202280364281566!POU2F2#5452;63:1.38571453052604:0.00503609050020758:0.0234669279325025!SPI1#6688;120:2.37806478507905:5.25676084299137e-20:1.33255059631353e-17!TCF12#6938;120:3.08245359483664:1.25299991275138e-29:4.97574364592554e-27!ZEB1#6935;62:2.52918547122637:2.40592385696892e-11:2.85212578544809e-09
|tf_chipseq_enrich=BATF#10538;38:2.23574026112932:4.3826841135797e-06:0.000137289485944256!BCL11A#53335;43:2.94658591655822:4.40869296087417e-10:4.31123112491327e-08!CTCF#10664;102:1.32064287452573:0.00149335687932002:0.00954145963044803!EBF1#1879;108:2.32342613388757:3.94539802589067e-17:8.1272864778303e-15!ELF1#1997;122:1.25480181394811:0.00293512333054245:0.0156614389985451!IRF4#3662;45:2.38201224855914:9.5444060382598e-08:5.6316848713549e-06!MEF2A#4205;53:2.39949574447134:4.81563484558214e-09:3.88071055276044e-07!MEF2C#4208;25:2.49464701042416:3.60572293952078e-05:0.000698013156775923!NFKB1#4790;109:1.44492491120079:2.81991240645569e-05:0.000594967337005709!PAX5#5079;111:1.78821684531579:3.80555088093323e-10:3.77443426831705e-08!POLR2A#5430;220:1.14115869285695:0.00425133714032151:0.0202280364281566!POU2F2#5452;63:1.38571453052604:0.00503609050020758:0.0234669279325025!SPI1#6688;120:2.37806478507905:5.25676084299137e-20:1.33255059631353e-17!TCF12#6938;120:3.08245359483664:1.25299991275138e-29:4.97574364592554e-27!ZEB1#6935;62:2.52918547122637:2.40592385696892e-11:2.85212578544809e-09
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633,0.951283,0.986833,0.806897,0.997225,0.99218,0.909853,0.493466,0.0684547,0.727562,0.968478,0.0054761,0.559214,0.0986716,0.423863,0.280248,0.974693,0.969619,0.0398956,0.102424,0.623765,0.812429,0.631659,0.98177,0.945037,0.737652,0.909621,0.882025,0.38106,0.964692,7.14618e-07,0.992525,0.998477,0.737212,0.255655,0.904052,0.990258,0.211947,0.756059,0.948501,0.662034,0.735022,0.448239,0.533232,0.980148,0.885465,0.223895,0.999447,0.560503,0.900406,0.930155,0.358773,0.0983525,0.554686,0.921118,0.206225,0.0605157,0.647792,0.0895818,0.999355,0.950329,0.999161,0.975696,0.914351,0.960042,0.398722,0.855219,0.993544,6.63669e-05,0.387152,0.608046,0.862445,0.257452,0.081405,0.957455,0.309598,0.533261,0.96256,0.990758,0.149909,0.991866,0.0142129,0.701855,0.690427,0.588104,5.07024e-05,0.559504,0.997934,0.997162,0.944078,0.814195,0.779268,0.0554452,0.175035,0.844155,0.954247,0.917832,0.0726804,0.982591,0.642474,0.988211,0.878614,0.971784,0.152006,0.227182,0.774837,0.823726,0.306098,0.150799,0.321689,0.862682,0.61283,0.664917,0.19881,0.0379866,0.64132,0.983903,0.331212,0.869443,0.00935468,0.993195,0.410034,0.252336,0.940157,0.493163,0.585489,0.942698,0.899589,0.302996,0.987694,0.785169,0.943302,0.991201,0.971389,0.803876,0.937329,0.94205,0.100659,0.286861,0.144276,0.801812,0.374324,0.519147,0.571449,0.887873,0.765468,0.00053464,0.940074,0.581339,0.050983,0.0455085,0.104075,0.255141,0.0114136,0.351212,0.482965,0.465138,0.544876,0.841259,0.288325,0.0176916,0.758061,0.841688,0.914398,0.0411144,0.505494,0.955999,0.481917,0.970142,0.0618575,0.733656,0.97433,0.383785,0.132624,0.473123,0.661648,0.870519,0.572015,0.577121,0.654719,0.414848,0.886863,0.183356,0.133133,0.438513,2.10506e-06,0.906798,0.0786273,0.142071,0.903559,0.978359,0.00872649,0.981144,0.412154,0.363475,0.372165,0.00434881,0.144199,0.00362017,0.230513,0.916778,0.578462,0.0327195,0.244425,0.461736,0.0552643,0.818704,0.943443,0.915802,0.468867,0.605883,0.263992,0.992667,0.192063,0.229684,0.29173,0.302858,0.801311,0.170991,0.000608254,0.107739,0.0166187,0.0956869,0.523167,0.712992,0.369548,0.734663,0.945429,0.113435,0.82542,0.788202,0.95044,0.991835,0.0716194,0.0936876,0.985972,0.64099,0.9423,0.918602,0.915902,0.962438,0.50974,0.0564754,0.974906,0.646481,0.794363,0.909474,0.182283,0.479842,0.315324,0.643444,0.987262,0.984187,0.239799,0.22396,0.0227539,0.932147,0.0242125,1,0.140261,0.694415,0.468481,0.225979,0.238384,0.668905,0.20836,0.397392,0.000760563,0.500231,0.0142674,0.997109,0.179113,0.0228866,0.738173,0.175966,0.895739,0.566561,0.818534,0.0656795,0.0861758,0.312982,0.204479,0.637774,0.0391478,0.584881,0.00391593,0.764853,0.177073,0.911165,0.866689,0.447715,0.837936,0.616634,0.10939,0.000119884,0.587764,0.358567,0.16711,0.583942,0.986512,0.01226,0.751761,0.248022,0.209151,0.412052,0.187088,0.936637,0.234455,0.232128,0.767266,0.909587,0.49289,0.77707,0.0281842,8.16102e-05,0.983111,0.955048,0.645955,0.952013,8.07632e-09,0.840302,0.901734,0.016921,0.622394,0.0257672,0.968895,0.00825165,0.000568894,0.348297,0.223119,0.997191,0.755706,0.948898,0.995628,0.850316,0.51601,0.585284,0.975456,0.878938,0.969918,0.625995,0.542962,0.869196,0.219833,0.865157,0.0245323,0.504497,0.660652,0.679974,0.780302,0.643274,0.850958,0.923858,0.603329,0.837766,0.887666,0.819132,0.331581,0.970503,0.724816,0.8345,0.997473,0.989446,0.932605,0.139919,0.709156,0.136784,0.990701,0.991058,3.88607e-13,0.695129,0.960402,0.916547,6.64311e-05,0.219519,0.984647,0.953023,0.982611,0.490193,2.85087e-06,0.147988,0.481636,0.921676,0.986775,0.998171,0.122037,0.00206181,0.96221,0.737561,0.976368,0.945374,0.976735,0.962672,0.740835,0.506787,0.999074,0.00028227,0.925654,0.000758812,0.763798,0.990285,0.906372,0.958112,0.936772,0.954813,0.105438,0.011033,0.000332137,0.971953,0.996434,0.0582392,0.517649,0.969355,0.0889266,0.90688,0.0461002,0.999935,0.736566,0.862221,0.172501,0.999237,0.821898,0.156831,0.978414,0.861418,0.808252,0.746935,0.991131,0.992075,0.0116687,0.874858,0.692809,0.990404,0.600911,0.368963,0.991234,0.870186,0.799841,0.979999,0.705283,0.962308,0.118323,0.267458,0.950989,0.96059,0.996615,0.915457,0.0148374,0.440658,0.998268,0.89342,0.986373,0.977587,0.954641,0.993997,0.999517,0.520296,0.0365521,0.592125,0.490422,0.148957,0.963198,0.995804,0.678266,0.771655,0.987792,0.999438,0.969282,0.576483,0.438099,0.999879,0.990638,0.840362,0.693225,0.992695,0.688611,0.831107,0.72828,0.961244,0.354367,0.989716,0.429871,0.961314,0.988951,0.96482,0.961144,0.980856,0.653708,0.0335237,0.00116149,0.223921,0.590497,0.977753,0.438994,0.750353,0.999754,0.542784,0.804418,0.83201,0.543627,0.241806,0.00112026,0.828992,0.972678,0.853554,0.928488,0.820169,0.994521,0.903076,0.92879,0.522872,0.839796,0.929453,0.985928,0.828983,0.377821,0.975913,0.999998,0.923173,0.997121,0.988714,0.999391,0.419896,0.790703,0.978125,0.747893,0.978972,0.987862,0.939415,0.980467,0.996557,0.999862,0.843536,0.657876,0.999387,0.959669,0.935377,0.909802
|tfbs_overrepresentation_for_novel_motifs=0.823639,4.57239,0.203678,0.122535,0.356214,0.370966,0.147278,0.563542,1.6017,0.492652,0.382246,0.464744,0.104056,0.240614,0.757598,0.164704,0.134384,0.300826,0.953982,8.88497,0.12256,0.781527,0.102776,0.263705,0.0057366,0.455169,7.07678,0.867564,0.0554945,1.92643,0.117894,0.988518,0.0706607,0.906624,1.42319,1.2723,0.00168235,0.577325,0.00551169,1.04396,0.0185248,0.411078,1.03619,0.95466,0.226365,0.23989,0.284521,0.843762,0.290736,0.316412,0.214888,0.329668,1.02089,0.141338,0.137495,0.0335085,0.186064,0.0281782,0.90705,0.208518,0.413147,0.0426639,0.606645,0.245384,0.20046,0.00191943,0.0413895,0.300078,0.176466,0.350627,0.208143,1.21236,0.0241579,0.0586985,0.212116,2.94476,0.750901,0.0427641,0.386156,0.61113,2.14198,0.0110058,0.0193051,0.762649,0.0363117,0.250304,0.131429,0.111982,0.517761,0.132821,0.655067,0.587089,0.00462864,0.179668,0.507305,0.368702,0.365774,0.0615524,0.687609,2.0072,1.43362,1.30582,0.19672,0.080816,0.0928272,0.00791025,0.548269,0.756822,0.0396525,0.678344,0.121727,0.444436,0.18015,0.113277,0.0584116,0.365913,0.123306,1.46937,1.19371,0.866388,0.241587,0.132542,0.357089,0.659346,0.0281563,0.729666,0.258044,0.0815086,0.077944,0.320105,0.255006,0.444809,0.0870912,0.106084,0.689836,1.58754,3.88825,0.0278632,0.345608,0.430139,0.934385,0.139537,0.348537,1.34616,0.326715,0.326242,0.508224,0.310777,2.3324,0.681251,2.39904,0.00307309,0.255705,0.163158,0.29147,0.0463879,0.241513,0.00923721,0.0828294,0.287927,0.138466,0.529379,0.263532,0.635263,0.0682427,0.0345821,0.00990773,0.275735,1.30583
}}
}}

Revision as of 13:12, 26 November 2012


Full id: C44_Dendritic_CD19_CD133_granulocyte_acute_thymus_immature



Phase1 CAGE Peaks

Hg19::chr10:103662491..103662497,+p@chr10:103662491..103662497
+
Hg19::chr10:104536836..104536854,-p@chr10:104536836..104536854
-
Hg19::chr10:104536871..104536888,-p@chr10:104536871..104536888
-
Hg19::chr10:126315568..126315574,-p@chr10:126315568..126315574
-
Hg19::chr10:126339118..126339152,+p@chr10:126339118..126339152
+
Hg19::chr10:43428400..43428412,+p@chr10:43428400..43428412
+
Hg19::chr10:72253384..72253425,+p@chr10:72253384..72253425
+
Hg19::chr10:72254756..72254791,-p@chr10:72254756..72254791
-
Hg19::chr10:73454625..73454650,+p@chr10:73454625..73454650
+
Hg19::chr10:91596826..91596839,+p@chr10:91596826..91596839
+
Hg19::chr10:91648654..91648691,+p@chr10:91648654..91648691
+
Hg19::chr10:91648716..91648724,+p@chr10:91648716..91648724
+
Hg19::chr10:91648780..91648791,+p@chr10:91648780..91648791
+
Hg19::chr10:91648797..91648811,+p@chr10:91648797..91648811
+
Hg19::chr10:91648821..91648839,+p@chr10:91648821..91648839
+
Hg19::chr10:98478374..98478407,+p@chr10:98478374..98478407
+
Hg19::chr11:123301142..123301165,+p3@ENST00000533341
p3@uc001pyu.2
Hg19::chr11:123301167..123301182,+p9@ENST00000533341
p9@uc001pyu.2
Hg19::chr11:123301202..123301218,+p7@ENST00000533341
p7@uc001pyu.2
Hg19::chr11:123301286..123301312,+p5@ENST00000533341
p5@uc001pyu.2
Hg19::chr11:59051831..59051840,-p1@ENST00000399003
Hg19::chr11:61124292..61124301,-p18@CYBASC3
Hg19::chr11:628252..628271,-p@chr11:628252..628271
-
Hg19::chr11:628558..628590,-p@chr11:628558..628590
-
Hg19::chr11:629346..629350,-p@chr11:629346..629350
-
Hg19::chr11:63994369..63994423,+p3@NUDT22
Hg19::chr11:63994425..63994440,+p5@NUDT22
Hg19::chr11:63997657..63997662,-p2@CU675262
Hg19::chr11:64002335..64002342,+p8@VEGFB
Hg19::chr11:64002634..64002651,+p@chr11:64002634..64002651
+
Hg19::chr11:64108369..64108380,+p@chr11:64108369..64108380
+
Hg19::chr11:64108398..64108415,+p@chr11:64108398..64108415
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Hg19::chr11:64128317..64128331,+p6@RPS6KA4
Hg19::chr11:72832698..72832702,-p@chr11:72832698..72832702
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Hg19::chr11:72852885..72852935,+p@chr11:72852885..72852935
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Hg19::chr11:72853022..72853031,-p12@FCHSD2
Hg19::chr11:72853103..72853151,-p2@FCHSD2
Hg19::chr11:72853498..72853507,-p9@FCHSD2
Hg19::chr12:104322755..104322760,-p@chr12:104322755..104322760
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Hg19::chr12:105380525..105380559,-p@chr12:105380525..105380559
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Hg19::chr12:111537227..111537239,+p7@CUX2
Hg19::chr12:111845114..111845126,+p@chr12:111845114..111845126
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Hg19::chr12:122231740..122231757,-p4@RHOF
Hg19::chr12:129308303..129308317,-p3@SLC15A4
Hg19::chr12:129308335..129308346,-p5@SLC15A4
Hg19::chr12:129308455..129308482,-p2@SLC15A4
Hg19::chr12:132541629..132541634,-p@chr12:132541629..132541634
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Hg19::chr12:133172433..133172443,+p@chr12:133172433..133172443
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Hg19::chr12:133346886..133346907,+p@chr12:133346886..133346907
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Hg19::chr12:133349385..133349413,+p@chr12:133349385..133349413
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Hg19::chr12:1702589..1702600,-p9@FBXL14
Hg19::chr12:52397654..52397658,+p@chr12:52397654..52397658
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Hg19::chr12:52463884..52463905,+p3@C12orf44
Hg19::chr12:57882200..57882215,+p17@MARS
Hg19::chr12:57882685..57882720,+p21@MARS
Hg19::chr12:58149447..58149465,+p5@MARCH9
Hg19::chr12:77158059..77158070,+p3@ZDHHC17
Hg19::chr12:77160173..77160180,+p@chr12:77160173..77160180
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Hg19::chr12:7899944..7899955,-p3@CLEC4C
Hg19::chr12:7899958..7899984,-p1@CLEC4C
Hg19::chr12:7902131..7902142,-p4@CLEC4C
Hg19::chr13:114557464..114557469,+p@chr13:114557464..114557469
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Hg19::chr13:60902553..60902562,+p@chr13:60902553..60902562
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Hg19::chr13:76056749..76056796,-p5@TBC1D4
Hg19::chr14:105391147..105391158,+p2@PLD4
Hg19::chr14:105391172..105391177,+p3@PLD4
Hg19::chr14:105391181..105391241,+p1@PLD4
Hg19::chr14:106331053..106331077,-p1@IGHJ2P
Hg19::chr14:106331447..106331468,-p1@IGHJ2
Hg19::chr14:106331487..106331493,-p3@uc001ysn.1
Hg19::chr14:106332200..106332250,-p1@IGHJ1P
Hg19::chr14:107252947..107252977,-p@chr14:107252947..107252977
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Hg19::chr14:107253188..107253199,+p@chr14:107253188..107253199
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Hg19::chr14:107253280..107253297,+p@chr14:107253280..107253297
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Hg19::chr14:20905853..20905865,+p1@ENST00000553568
Hg19::chr14:20905882..20905893,+p2@ENST00000553568
Hg19::chr14:21259592..21259624,+p@chr14:21259592..21259624
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Hg19::chr14:21259636..21259644,+p@chr14:21259636..21259644
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Hg19::chr14:25101628..25101641,-p@chr14:25101628..25101641
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Hg19::chr14:25101897..25101939,+p@chr14:25101897..25101939
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Hg19::chr14:25103431..25103449,-p2@GZMB
Hg19::chr14:34419672..34419694,-p6@EGLN3
Hg19::chr14:68233218..68233229,-p@chr14:68233218..68233229
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Hg19::chr14:69951439..69951452,+p2@PLEKHD1
Hg19::chr14:69951457..69951471,+p3@PLEKHD1
Hg19::chr14:70375059..70375088,+p@chr14:70375059..70375088
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Hg19::chr15:31619119..31619131,+p14@KLF13
Hg19::chr15:31619140..31619152,+p11@KLF13
Hg19::chr15:31619200..31619211,+p12@KLF13
Hg19::chr15:72209237..72209246,-p@chr15:72209237..72209246
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Hg19::chr15:74679677..74679684,+p@chr15:74679677..74679684
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Hg19::chr15:75162647..75162670,+p@chr15:75162647..75162670
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Hg19::chr15:75303993..75304011,+p9@SCAMP5
Hg19::chr15:75304015..75304027,+p14@SCAMP5
Hg19::chr15:75304053..75304061,+p26@SCAMP5
Hg19::chr15:91433129..91433138,+p11@FES
Hg19::chr16:134974..134979,-p@chr16:134974..134979
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Hg19::chr16:21313936..21313941,-p@chr16:21313936..21313941
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Hg19::chr16:2737269..2737281,-p@chr16:2737269..2737281
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Hg19::chr16:31469618..31469642,+p4@ARMC5
Hg19::chr16:31469652..31469665,+p10@ARMC5
Hg19::chr16:53096041..53096055,+p@chr16:53096041..53096055
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Hg19::chr16:53133756..53133758,-p@chr16:53133756..53133758
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Hg19::chr16:56903804..56903818,+p@chr16:56903804..56903818
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Hg19::chr16:56904102..56904111,+p@chr16:56904102..56904111
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Hg19::chr16:579331..579368,-p@chr16:579331..579368
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Hg19::chr16:67360856..67360885,+p@chr16:67360856..67360885
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Hg19::chr16:67564218..67564227,-p@chr16:67564218..67564227
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Hg19::chr16:67564498..67564514,+p@chr16:67564498..67564514
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Hg19::chr16:68291415..68291419,+p@chr16:68291415..68291419
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Hg19::chr16:68404878..68404887,-p@chr16:68404878..68404887
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Hg19::chr16:68404908..68404919,-p@chr16:68404908..68404919
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Hg19::chr16:68404926..68404949,-p@chr16:68404926..68404949
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Hg19::chr16:68404951..68404975,-p@chr16:68404951..68404975
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Hg19::chr16:68404977..68405010,-p@chr16:68404977..68405010
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Hg19::chr16:771364..771376,-p@chr16:771364..771376
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Hg19::chr16:85936412..85936431,+p2@IRF8
Hg19::chr16:85936488..85936492,+p10@IRF8
Hg19::chr16:85936515..85936521,+p8@IRF8
Hg19::chr16:85936539..85936562,+p3@IRF8
Hg19::chr16:85936600..85936623,+p4@IRF8
Hg19::chr16:86018628..86018633,-p@chr16:86018628..86018633
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Hg19::chr16:9056719..9056739,+p@chr16:9056719..9056739
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Hg19::chr17:1674296..1674304,+p@chr17:1674296..1674304
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Hg19::chr17:1674956..1674967,+p@chr17:1674956..1674967
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Hg19::chr17:1674976..1674981,+p@chr17:1674976..1674981
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Hg19::chr17:1674982..1675041,+p@chr17:1674982..1675041
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Hg19::chr17:1680853..1680858,-p4@CU680723
Hg19::chr17:16892517..16892527,-p@chr17:16892517..16892527
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Hg19::chr17:16892573..16892578,-p@chr17:16892573..16892578
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Hg19::chr17:184975..184999,-p@chr17:184975..184999
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Hg19::chr17:27065136..27065144,+p@chr17:27065136..27065144
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Hg19::chr17:27065169..27065184,+p@chr17:27065169..27065184
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Hg19::chr17:27070817..27070825,-p@chr17:27070817..27070825
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Hg19::chr17:27895110..27895133,+p@chr17:27895110..27895133
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Hg19::chr17:27895502..27895516,-p@chr17:27895502..27895516
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Hg19::chr17:27895517..27895586,-p@chr17:27895517..27895586
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Hg19::chr17:3817642..3817688,-p@chr17:3817642..3817688
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Hg19::chr17:3819314..3819331,-p@chr17:3819314..3819331
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Hg19::chr17:3819466..3819477,+p@chr17:3819466..3819477
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Hg19::chr17:40134345..40134392,-p@chr17:40134345..40134392
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Hg19::chr17:40134422..40134444,-p@chr17:40134422..40134444
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Hg19::chr17:55950708..55950726,-p@chr17:55950708..55950726
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Hg19::chr17:55950729..55950745,-p@chr17:55950729..55950745
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Hg19::chr17:55950784..55950789,-p@chr17:55950784..55950789
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Hg19::chr17:62774949..62774990,-p@chr17:62774949..62774990
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Hg19::chr17:66507965..66507969,-p@chr17:66507965..66507969
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Hg19::chr17:73266616..73266630,-p6@MIF4GD
Hg19::chr17:74476945..74476989,+p@chr17:74476945..74476989
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Hg19::chr17:7905524..7905565,+p2@GUCY2D
Hg19::chr18:13612501..13612506,+p11@C18orf1
Hg19::chr18:13612559..13612571,+p@chr18:13612559..13612571
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Hg19::chr18:13612587..13612600,+p@chr18:13612587..13612600
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Hg19::chr18:13612613..13612630,+p@chr18:13612613..13612630
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Hg19::chr18:42134920..42134924,-p@chr18:42134920..42134924
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Hg19::chr18:42136405..42136416,-p@chr18:42136405..42136416
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Hg19::chr18:42136420..42136431,-p@chr18:42136420..42136431
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Hg19::chr18:42136436..42136446,-p@chr18:42136436..42136446
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Hg19::chr18:52989565..52989623,-p9@TCF4
Hg19::chr18:53253077..53253100,-p46@TCF4
Hg19::chr18:53253297..53253322,-p30@TCF4
Hg19::chr18:53255839..53255854,-p13@TCF4
Hg19::chr18:53257001..53257015,-p5@TCF4
Hg19::chr18:72265670..72265694,-p@chr18:72265670..72265694
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Hg19::chr18:77551694..77551703,-p@chr18:77551694..77551703
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Hg19::chr18:77552400..77552414,-p@chr18:77552400..77552414
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Hg19::chr18:77558264..77558310,+p@chr18:77558264..77558310
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Hg19::chr19:10677541..10677555,-p@chr19:10677541..10677555
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Hg19::chr19:11146457..11146463,-p@chr19:11146457..11146463
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Hg19::chr19:12721790..12721810,+p2@ZNF791
Hg19::chr19:16699274..16699288,-p1@BC030138
Hg19::chr19:16699291..16699310,-p2@BC030138
Hg19::chr19:17638147..17638152,+p3@FAM129C
Hg19::chr19:3124816..3124817,-p@chr19:3124816..3124817
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Hg19::chr19:35763394..35763429,-p@chr19:35763394..35763429
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Hg19::chr19:4432022..4432053,+p@chr19:4432022..4432053
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Hg19::chr19:4432075..4432086,+p@chr19:4432075..4432086
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Hg19::chr19:4432113..4432122,+p@chr19:4432113..4432122
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Hg19::chr19:50848009..50848031,-p1@NAPSB
Hg19::chr19:5336455..5336460,+p@chr19:5336455..5336460
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Hg19::chr19:5336483..5336493,+p@chr19:5336483..5336493
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Hg19::chr19:5336498..5336527,+p@chr19:5336498..5336527
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Hg19::chr19:5336629..5336637,+p@chr19:5336629..5336637
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Hg19::chr19:5338459..5338468,-p@chr19:5338459..5338468
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Hg19::chr19:5338474..5338498,-p@chr19:5338474..5338498
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Hg19::chr19:5338776..5338816,+p@chr19:5338776..5338816
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Hg19::chr19:54850347..54850359,-p3@LILRA4
Hg19::chr19:54850385..54850414,-p2@LILRA4
Hg19::chr19:54850417..54850439,-p1@LILRA4
Hg19::chr19:54850440..54850447,-p4@LILRA4
Hg19::chr19:56623811..56623815,-p@chr19:56623811..56623815
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Hg19::chr19:661624..661638,+p@chr19:661624..661638
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Hg19::chr19:662430..662439,+p@chr19:662430..662439
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Hg19::chr1:113257796..113257811,-p2@PPM1J
Hg19::chr1:113257882..113257896,-p3@PPM1J
Hg19::chr1:145589059..145589070,-p3@NUDT17
Hg19::chr1:157108728..157108744,-p5@ETV3
Hg19::chr1:157147914..157147931,+p@chr1:157147914..157147931
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Hg19::chr1:1710244..1710261,-p5@NADK
Hg19::chr1:174188378..174188390,+p13@RABGAP1L
Hg19::chr1:18024159..18024163,-p@chr1:18024159..18024163
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Hg19::chr1:192508293..192508307,+p@chr1:192508293..192508307
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Hg19::chr1:196057864..196057881,-p@chr1:196057864..196057881
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Hg19::chr1:206306107..206306143,-p1@ENST00000436158
p1@ENST00000455672
Hg19::chr1:210502330..210502350,+p3@HHAT
Hg19::chr1:212968135..212968164,+p3@TATDN3
Hg19::chr1:22109425..22109430,-p19@USP48
Hg19::chr1:243419000..243419003,+p8@SDCCAG8
Hg19::chr1:244214455..244214479,-p@chr1:244214455..244214479
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Hg19::chr1:244214655..244214666,+p7@ZNF238
Hg19::chr1:53833780..53833801,-p2@ENST00000449958
Hg19::chr1:53833812..53833826,-p1@ENST00000449958
Hg19::chr1:53834681..53834688,-p@chr1:53834681..53834688
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Hg19::chr1:53834714..53834761,-p@chr1:53834714..53834761
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Hg19::chr1:66169696..66169704,+p@chr1:66169696..66169704
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Hg19::chr1:66169737..66169756,+p@chr1:66169737..66169756
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Hg19::chr1:8014089..8014102,+p8@PARK7
Hg19::chr1:92948492..92948508,-p@chr1:92948492..92948508
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Hg19::chr1:92948515..92948532,-p@chr1:92948515..92948532
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Hg19::chr1:92948792..92948807,-p@chr1:92948792..92948807
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Hg19::chr1:92950138..92950159,-p4@GFI1
Hg19::chr20:23029606..23029614,-p17@THBD
Hg19::chr20:23029620..23029640,-p5@THBD
Hg19::chr20:23029668..23029678,-p14@THBD
Hg19::chr20:23029700..23029711,-p2@AB587391
Hg19::chr20:23029956..23029963,+p@chr20:23029956..23029963
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Hg19::chr20:23029975..23029997,+p@chr20:23029975..23029997
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Hg19::chr20:23211928..23211934,+p@chr20:23211928..23211934
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Hg19::chr20:32829196..32829232,+p1@AY805393
Hg19::chr20:42310300..42310312,+p@chr20:42310300..42310312
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Hg19::chr20:42310399..42310415,+p@chr20:42310399..42310415
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Hg19::chr20:42339625..42339640,+p@chr20:42339625..42339640
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Hg19::chr20:42340062..42340071,+p@chr20:42340062..42340071
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Hg19::chr20:42697364..42697377,+p@chr20:42697364..42697377
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Hg19::chr20:4803645..4803654,+p@chr20:4803645..4803654
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Hg19::chr20:56255237..56255246,-p@chr20:56255237..56255246
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Hg19::chr20:56255254..56255266,-p@chr20:56255254..56255266
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Hg19::chr20:9491518..9491543,+p@chr20:9491518..9491543
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Hg19::chr21:26779622..26779662,-p@chr21:26779622..26779662
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Hg19::chr21:43723219..43723257,-p@chr21:43723219..43723257
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Hg19::chr21:44529290..44529301,+p@chr21:44529290..44529301
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Hg19::chr21:45602441..45602448,+p@chr21:45602441..45602448
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Hg19::chr21:45602458..45602471,+p@chr21:45602458..45602471
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Hg19::chr22:23241776..23241804,+p2@AL713800
Hg19::chr22:24180746..24180778,-p3@DERL3
Hg19::chr22:24180788..24180805,-p6@DERL3
Hg19::chr22:24180954..24180971,-p7@DERL3
Hg19::chr22:24180978..24180996,-p5@DERL3
Hg19::chr22:24181174..24181200,-p1@DERL3
Hg19::chr22:24181278..24181309,-p4@DERL3
Hg19::chr22:24181616..24181622,+p@chr22:24181616..24181622
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Hg19::chr22:24181629..24181642,+p@chr22:24181629..24181642
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Hg19::chr22:24181653..24181663,+p@chr22:24181653..24181663
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Hg19::chr22:24186544..24186557,-p@chr22:24186544..24186557
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Hg19::chr22:47070305..47070317,-p@chr22:47070305..47070317
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Hg19::chr22:47070490..47070513,+p3@GRAMD4
Hg19::chr22:47070544..47070559,+p6@GRAMD4
Hg19::chr2:102972723..102972746,+p6@IL18R1
Hg19::chr2:128180735..128180740,-p@chr2:128180735..128180740
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Hg19::chr2:128180842..128180878,+p2@PROC
Hg19::chr2:128180886..128180901,+p4@PROC
Hg19::chr2:135733382..135733418,+p@chr2:135733382..135733418
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Hg19::chr2:153415904..153415907,+p@chr2:153415904..153415907
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Hg19::chr2:220465618..220465623,+p7@STK11IP
Hg19::chr2:220466117..220466127,+p5@STK11IP
Hg19::chr2:220466151..220466157,+p11@STK11IP
Hg19::chr2:37319280..37319302,+p@chr2:37319280..37319302
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Hg19::chr2:38977760..38977793,-p@chr2:38977760..38977793
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Hg19::chr2:60639257..60639280,-p@chr2:60639257..60639280
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Hg19::chr2:60639281..60639304,-p@chr2:60639281..60639304
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Hg19::chr2:60639314..60639338,-p@chr2:60639314..60639338
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Hg19::chr2:60639343..60639352,-p@chr2:60639343..60639352
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Hg19::chr2:60782262..60782286,-p@chr2:60782262..60782286
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Hg19::chr2:60782577..60782593,-p@chr2:60782577..60782593
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Hg19::chr2:60782745..60782752,+p@chr2:60782745..60782752
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Hg19::chr2:89158038..89158051,+p@chr2:89158038..89158051
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Hg19::chr2:89161432..89161449,-p2@IGKJ1
Hg19::chr2:89161453..89161485,-p1@IGKJ1
Hg19::chr2:89161486..89161493,-p1@ENST00000418209
Hg19::chr2:89161517..89161528,-p2@ENST00000418209
Hg19::chr2:89161568..89161575,-p4@ENST00000418209
Hg19::chr2:89162070..89162082,-p@chr2:89162070..89162082
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Hg19::chr2:89165515..89165526,-p2@ENST00000430694
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Hg19::chr2:89165531..89165542,-p3@ENST00000430694
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Hg19::chr2:89165569..89165580,-p5@ENST00000430694
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Hg19::chr2:89165603..89165608,-p10@ENST00000430694
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Hg19::chr2:89165668..89165669,-p9@ENST00000430694
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Hg19::chr2:99165457..99165496,-p@chr2:99165457..99165496
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Hg19::chr2:99173256..99173285,-p@chr2:99173256..99173285
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Hg19::chr2:99181476..99181492,+p@chr2:99181476..99181492
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Hg19::chr3:113344763..113344777,+p7@SIDT1
Hg19::chr3:113344781..113344796,+p3@SIDT1
Hg19::chr3:191046810..191046860,+p6@CCDC50
Hg19::chr3:191047018..191047047,+p3@CCDC50
Hg19::chr3:191047053..191047089,+p4@CCDC50
Hg19::chr3:197476196..197476224,-p6@KIAA0226
Hg19::chr3:44552073..44552084,-p2@ZNF852
Hg19::chr3:46077062..46077087,+p@chr3:46077062..46077087
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Hg19::chr3:47205402..47205411,-p11@SETD2
Hg19::chr3:50365569..50365570,-p3@TUSC2
Hg19::chr3:5053214..5053223,-p@chr3:5053214..5053223
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Hg19::chr3:57260377..57260399,-p2@HESX1
Hg19::chr3:58186767..58186823,-p@chr3:58186767..58186823
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Hg19::chr3:58200310..58200326,-p5@DNASE1L3
Hg19::chr3:58200329..58200340,-p8@DNASE1L3
Hg19::chr3:58200409..58200438,-p4@DNASE1L3
Hg19::chr3:88198944..88198962,+p7@C3orf38
Hg19::chr4:10096507..10096525,-p21@WDR1
Hg19::chr4:152330024..152330050,-p1@ENST00000508847
Hg19::chr4:152833989..152834007,+p@chr4:152833989..152834007
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Hg19::chr4:152834021..152834065,+p@chr4:152834021..152834065
+
Hg19::chr4:156536533..156536549,+p@chr4:156536533..156536549
+
Hg19::chr4:156536620..156536641,+p@chr4:156536620..156536641
+
Hg19::chr4:38745751..38745762,+p@chr4:38745751..38745762
+
Hg19::chr4:71768164..71768177,+p3@MOB1B
Hg19::chr4:71862994..71863029,+p@chr4:71862994..71863029
+
Hg19::chr4:71863041..71863059,+p@chr4:71863041..71863059
+
Hg19::chr4:786606..786618,-p11@CPLX1
Hg19::chr4:8200703..8200720,+p9@SH3TC1
Hg19::chr4:8200756..8200765,+p17@SH3TC1
Hg19::chr5:115412419..115412448,+p@chr5:115412419..115412448
+
Hg19::chr5:138725522..138725542,-p3@MZB1
Hg19::chr5:156927169..156927191,+p@chr5:156927169..156927191
+
Hg19::chr5:1799180..1799192,+p@chr5:1799180..1799192
+
Hg19::chr5:43519263..43519271,+p@chr5:43519263..43519271
+
Hg19::chr5:94417523..94417560,-p5@MCTP1
Hg19::chr5:94417562..94417578,-p8@MCTP1
Hg19::chr6:11731299..11731308,+p@chr6:11731299..11731308
+
Hg19::chr6:135644422..135644432,-p12@AHI1
Hg19::chr6:135664055..135664088,-p@chr6:135664055..135664088
-
Hg19::chr6:167369681..167369748,-p1@ENST00000507747
Hg19::chr6:32190527..32190536,-p@chr6:32190527..32190536
-
Hg19::chr6:341268..341280,-p@chr6:341268..341280
-
Hg19::chr6:342279..342288,+p@chr6:342279..342288
+
Hg19::chr6:35016594..35016638,+p@chr6:35016594..35016638
+
Hg19::chr6:35026759..35026770,-p@chr6:35026759..35026770
-
Hg19::chr6:394018..394029,-p@chr6:394018..394029
-
Hg19::chr6:394034..394046,-p@chr6:394034..394046
-
Hg19::chr6:401614..401625,+p@chr6:401614..401625
+
Hg19::chr6:42883784..42883804,+p1@PTCRA
Hg19::chr6:42896754..42896799,-p@chr6:42896754..42896799
-
Hg19::chr6:42897990..42898012,+p@chr6:42897990..42898012
+
Hg19::chr6:45390164..45390195,-p@chr6:45390164..45390195
-
Hg19::chr6:45390300..45390335,+p4@RUNX2
Hg19::chr6:45390599..45390662,+p11@RUNX2
Hg19::chr6:47445214..47445218,-p@chr6:47445214..47445218
-
Hg19::chr6:47445710..47445738,+p6@CD2AP
Hg19::chr6:47445745..47445788,+p4@CD2AP
Hg19::chr6:90062888..90062899,-p6@UBE2J1
Hg19::chr7:101821643..101821681,+p@chr7:101821643..101821681
+
Hg19::chr7:130809261..130809298,+p@chr7:130809261..130809298
+
Hg19::chr7:141998782..141998789,+p8@TRBV1
Hg19::chr7:150130792..150130825,+p1@ENST00000486954
Hg19::chr7:1961711..1961753,-p@chr7:1961711..1961753
-
Hg19::chr7:2271845..2271865,+p@chr7:2271845..2271865
+
Hg19::chr7:3018447..3018480,+p@chr7:3018447..3018480
+
Hg19::chr7:3020194..3020229,-p@chr7:3020194..3020229
-
Hg19::chr7:3020230..3020251,-p@chr7:3020230..3020251
-
Hg19::chr7:37860907..37860918,+p2@ENST00000437554
Hg19::chr7:37860926..37860937,+p1@ENST00000437554
Hg19::chr7:4773446..4773457,-p@chr7:4773446..4773457
-
Hg19::chr7:4779412..4779420,-p@chr7:4779412..4779420
-
Hg19::chr7:4784283..4784288,-p@chr7:4784283..4784288
-
Hg19::chr7:51224469..51224486,-p@chr7:51224469..51224486
-
Hg19::chr8:11324020..11324031,-p@chr8:11324020..11324031
-
Hg19::chr8:11351970..11351981,+p12@BLK
Hg19::chr8:119294412..119294441,+p3@ENST00000366457
Hg19::chr8:119294456..119294486,+p1@ENST00000366457
Hg19::chr8:119294494..119294511,+p1@ENST00000449065
Hg19::chr8:135613849..135613883,-p7@ZFAT
Hg19::chr8:135613895..135613921,-p8@ZFAT
Hg19::chr8:135614062..135614073,-p14@ZFAT
Hg19::chr8:135614084..135614119,-p4@ZFAT
Hg19::chr8:135614120..135614149,-p5@ZFAT
Hg19::chr8:135614159..135614170,-p13@ZFAT
Hg19::chr8:135614204..135614209,-p22@ZFAT
Hg19::chr8:135652051..135652065,-p21@ZFAT
Hg19::chr8:135671985..135672023,-p@chr8:135671985..135672023
-
Hg19::chr9:101984719..101984730,+p3@SEC61B
Hg19::chr9:114840910..114840925,-p@chr9:114840910..114840925
-
Hg19::chr9:114840937..114840961,-p@chr9:114840937..114840961
-
Hg19::chr9:124241522..124241536,-p@chr9:124241522..124241536
-
Hg19::chr9:128582969..128582976,+p@chr9:128582969..128582976
+
Hg19::chr9:130678316..130678327,+p@chr9:130678316..130678327
+
Hg19::chr9:130678336..130678345,+p@chr9:130678336..130678345
+
Hg19::chr9:130678352..130678361,+p@chr9:130678352..130678361
+
Hg19::chr9:139596265..139596289,-p@chr9:139596265..139596289
-
Hg19::chr9:139606415..139606418,+p@chr9:139606415..139606418
+
Hg19::chr9:139694777..139694789,+p2@KIAA1984
Hg19::chr9:139694790..139694804,+p4@C9orf86
Hg19::chr9:139694809..139694825,+p5@C9orf86
Hg19::chr9:139694828..139694859,+p3@C9orf86
Hg19::chr9:139879342..139879362,+p6@LCNL1
Hg19::chr9:139887213..139887255,+p2@C9orf142
Hg19::chr9:139887321..139887335,+p5@C9orf142
Hg19::chr9:139887338..139887389,+p3@C9orf142
Hg19::chr9:139890798..139890821,-p5@CLIC3
Hg19::chr9:139890864..139890876,-p10@CLIC3
Hg19::chr9:139891110..139891130,+p@chr9:139891110..139891130
+
Hg19::chr9:139891505..139891536,-p12@CLIC3
Hg19::chr9:140062651..140062657,-p@chr9:140062651..140062657
-
Hg19::chr9:140064045..140064052,+p@chr9:140064045..140064052
+
Hg19::chr9:19230548..19230598,+p@chr9:19230548..19230598
+
Hg19::chr9:35833866..35833870,-p@chr9:35833866..35833870
-
Hg19::chr9:35846267..35846282,+p@chr9:35846267..35846282
+
Hg19::chr9:94935693..94935702,-p@chr9:94935693..94935702
-
Hg19::chr9:94935773..94935787,-p@chr9:94935773..94935787
-
Hg19::chrX:13778731..13778742,+p7@OFD1
Hg19::chrX:22056318..22056323,+p8@PHEX
Hg19::chrX:22056350..22056355,+p11@PHEX
Hg19::chrX:22056377..22056388,+p4@PHEX
Hg19::chrX:22056423..22056428,+p13@PHEX
Hg19::chrX:22056435..22056446,+p3@PHEX


Enriched pathways on this co-expression cluster<b>Summary:</b><br>Canonical pathway gene sets were compiled from Reactome, Wikipathways and KEGG. For the major signaling pathways, the transcriptionally-regulated genes (downstream targets) were obtained from Netpath. Combined, the canonical pathways and downstream targets totaled 489 human gene sets. The corresponding M. musculus gene sets were inferred by homology using the HomoloGene database. Enrichment for each of the canonical 489 pathways and gene sets included in the co-expression cluster was assessed by the hypergeometric probability. The resulting P values were also then adjusted by the Benjamini-Hochberg method for multiple comparisons.<br><b>Analyst: </b>Emmanuel Dimont<br><br>link to source dataset<br>data


No results for this coexpression

Enriched Gene Ontology terms on this co-expression cluster<b>Summary:</b> Results for GOStat analysis on co-expressed clusters. Each cluster with promoters mapping to at least two different genes was analysed with GOStat (PMID: 14962934) with default parameter. <br><b>Analyst:</b> Erik Arner<br><br>link to source dataset<br>data


GO IDGO nameFDR corrected p-value
GO:0003702RNA polymerase II transcription factor activity0.0119727516496982
GO:0005515protein binding0.0138965815428835
GO:0007242intracellular signaling cascade0.0219847442103654
GO:0006357regulation of transcription from RNA polymerase II promoter0.0296845419904631



Enriched sample ontology terms on this co-expression cluster<b>Summary:</b>To summarize promoter activities (expression profile of a TSS region) across ~1000 samples, we performed enrichment analysis based on FANTOM5 Sample Ontology (FF ontology). The question here is “in which type of samples the promoter is more active”. To answer this question, we compared expressions (TPMs) in the samples associated with a sample ontology term and the rest of the samples by using the Mann-Whitney rank sum test. To summarize ontologies enriched in this co-expression cluster, we ran the same analysis on an averaged expression profile of all promoters that make up. <b>Analyst:</b> Hideya Kawaji <br><br>links to source dataset<br><br>cell_data<br>uberon_data<br><br>


Cell Type
Ontology termp-valuen
plasmacytoid dendritic cell2.96e-473
single nucleate cell4.87e-463
mononuclear cell4.87e-463
circulating cell1.97e-236
basophil1.43e-213
dendritic cell2.02e-1310
granulocyte1.09e-088
Uber Anatomy
Ontology termp-valuen
hemopoietic organ7.54e-207
immune organ7.54e-207
tonsil1.93e-161
mucosa-associated lymphoid tissue1.93e-161
lymphoid tissue1.93e-161
tonsillar ring1.93e-161
thymus6.13e-164
hemolymphoid system gland6.13e-164
thymic region6.13e-164
pharyngeal gland6.13e-164
thymus primordium6.13e-164
chordate pharynx3.84e-1410
pharyngeal region of foregut3.84e-1410
pharynx6.48e-1311
pharyngeal epithelium5.93e-116
blood9.19e-1015
haemolymphatic fluid9.19e-1015
organism substance9.19e-1015
hemolymphoid system2.94e-08108
upper respiratory tract1.01e-0719
hematopoietic system4.76e-0798
blood island4.76e-0798
neck6.31e-0710
gland of gut6.31e-0710


Overrepresented TFBS (DNA) motifs on this co-expression cluster<b>Summary:</b>The values shown are the p-values for overrepresentation of the motif in this coexpression cluster. So a small p-value means a strong overrepresentation. <b>Analyst:</b> Michiel de Hoon <br><br>link to source data <br> Novel motifs <br>data <br><br> Jaspar motifs <br>data


Novel motifs



JASPAR motifs

Motifs-log10(p-value)

{{{tfbs_overrepresentation_jaspar}}}



ENCODE TF ChIP-seq peak enrichment analysis<b>Summary:</b> For each TF and each co-expression cluster, the number of promoters with ENCODE TF ChIP signal was compared with the rest of promoters from the robust set using Fisher's exact test. Clusters with significant ChIP enrichment (q <= 0.05) after Benjamini-Hochberg correction were retained. <br><b>Analyst:</b> Erik Arner<br><br>link to source dataset<br><br>data


(#promoters = Number of promoters in this coexpression cluster that have ChIP signal of the TF)

TF#promotersEnrichmentp-valueq-value
BATF#10538382.235740261129324.3826841135797e-060.000137289485944256
BCL11A#53335432.946585916558224.40869296087417e-104.31123112491327e-08
CTCF#106641021.320642874525730.001493356879320020.00954145963044803
EBF1#18791082.323426133887573.94539802589067e-178.1272864778303e-15
ELF1#19971221.254801813948110.002935123330542450.0156614389985451
IRF4#3662452.382012248559149.5444060382598e-085.6316848713549e-06
MEF2A#4205532.399495744471344.81563484558214e-093.88071055276044e-07
MEF2C#4208252.494647010424163.60572293952078e-050.000698013156775923
NFKB1#47901091.444924911200792.81991240645569e-050.000594967337005709
PAX5#50791111.788216845315793.80555088093323e-103.77443426831705e-08
POLR2A#54302201.141158692856950.004251337140321510.0202280364281566
POU2F2#5452631.385714530526040.005036090500207580.0234669279325025
SPI1#66881202.378064785079055.25676084299137e-201.33255059631353e-17
TCF12#69381203.082453594836641.25299991275138e-294.97574364592554e-27
ZEB1#6935622.529185471226372.40592385696892e-112.85212578544809e-09



Relative expression of the co-expression cluster<b>Summary:</b>Co-expression clusters are compared against FANTOM5 samples to obtain relative expression. <br><b>Analyst:</b>NA<br><br>link to data source<br> data