FFCP PHASE1:Hg19::chr10:3094259..3094288,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=N|UniProt=NA|association_with_transcript=NA|coexpression_cluster_id=C52|description=CAGE_peak_at_chr10:3094259..3094288,+|id=chr10:3094259..3094288,+|ontology_enrichment_celltype=CL:0000594!1.42e-20!3;CL:0000188!4.24e-12!9;CL:0000214!1.16e-10!3;CL:0000135!2.25e-10!3;CL:0000386!2.25e-10!3;CL:0000388!2.25e-10!3;CL:0000499!6.50e-09!27;CL:0000153!1.02e-07!9;CL:0000447!1.02e-07!9|ontology_enrichment_celltype_v019=CL:0000214;1.40e-14;3|ontology_enrichment_celltype_v019_2=CL:0000214,1.40e-14,3|ontology_enrichment_development_v019=|ontology_enrichment_disease=DOID:1240!1.70e-10!39;DOID:1192!2.47e-10!3;DOID:8692!2.52e-10!31;DOID:6193!1.13e-08!1;DOID:8552!1.75e-08!1;DOID:3369!1.88e-08!1;DOID:2531!9.31e-08!51;DOID:0060083!9.31e-08!51|ontology_enrichment_disease_v019=DOID:6193;2.21e-40;1!DOID:3350;5.69e-21;2!DOID:1240;3.32e-08;39|ontology_enrichment_disease_v019_2=DOID:6193,1.48e-40,1;DOID:3350,4.66e-21,2;DOID:1240,6.08e-10,39;DOID:2531,8.80e-08,51;DOID:0060083,8.80e-08,51|ontology_enrichment_uberon=UBERON:0004905!1.20e-13!5;UBERON:0000982!1.20e-13!5;UBERON:0004770!1.20e-13!5;UBERON:0006915!1.16e-10!3;UBERON:0002018!1.16e-10!3;UBERON:0002217!1.16e-10!3;UBERON:0007616!1.16e-10!3;UBERON:0000043!2.25e-10!3|ontology_enrichment_uberon_v019=UBERON:0006915;1.40e-14;3!UBERON:0007616;1.40e-14;3!UBERON:0002217;1.40e-14;3!UBERON:0002018;1.40e-14;3|ontology_enrichment_uberon_v019_2=UBERON:0006915,1.40e-14,3;UBERON:0007616,1.40e-14,3;UBERON:0002217,1.40e-14,3;UBERON:0002018,1.40e-14,3|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.662794751455832,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.28769239232215,0,0,0,0,0,0,0,0,0,0,0,0.329851300186716,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.361439152384566,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.496971951695318,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0821271560138091,0,0,0,0,0,0,0.182091168006717,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154048617114644,0,0,0.107420244868274,0.145016693914229,0.0852266274161009,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.11107635297664,0.658589785919804,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.228234679033192,0,0,0,0,0,0,0,0.307240764308458,0.223676107892416,1.16794399198336,0,0,1.23087398947712,0,0,0,0,0,0,7.91248028370096,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.511572370226872,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.498635045700469,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.54787429224455,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.192619830407303,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.318004350653419,0.0788617450012534,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.462175628631418,0.432626562123789,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112131862580613,0,0,0,0,0,0.0717222053926763,0,0,0,0,0,0,0,0,0,0,0|short_description=p@chr10:3094259..3094288,+}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=N | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C52 | |||
|description=CAGE_peak_at_chr10:3094259..3094288,+ | |||
|id=chr10:3094259..3094288,+ | |||
|ontology_enrichment_celltype=CL:0000594!1.42e-20!3;CL:0000188!4.24e-12!9;CL:0000214!1.16e-10!3;CL:0000135!2.25e-10!3;CL:0000386!2.25e-10!3;CL:0000388!2.25e-10!3;CL:0000499!6.50e-09!27;CL:0000153!1.02e-07!9;CL:0000447!1.02e-07!9 | |||
|ontology_enrichment_celltype_v019=CL:0000214;1.40e-14;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000214,1.40e-14,3 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:1240!1.70e-10!39;DOID:1192!2.47e-10!3;DOID:8692!2.52e-10!31;DOID:6193!1.13e-08!1;DOID:8552!1.75e-08!1;DOID:3369!1.88e-08!1;DOID:2531!9.31e-08!51;DOID:0060083!9.31e-08!51 | |||
|ontology_enrichment_disease_v019=DOID:6193;2.21e-40;1!DOID:3350;5.69e-21;2!DOID:1240;3.32e-08;39 | |||
|ontology_enrichment_disease_v019_2=DOID:6193,1.48e-40,1;DOID:3350,4.66e-21,2;DOID:1240,6.08e-10,39;DOID:2531,8.80e-08,51;DOID:0060083,8.80e-08,51 | |||
|ontology_enrichment_uberon=UBERON:0004905!1.20e-13!5;UBERON:0000982!1.20e-13!5;UBERON:0004770!1.20e-13!5;UBERON:0006915!1.16e-10!3;UBERON:0002018!1.16e-10!3;UBERON:0002217!1.16e-10!3;UBERON:0007616!1.16e-10!3;UBERON:0000043!2.25e-10!3 | |||
|ontology_enrichment_uberon_v019=UBERON:0006915;1.40e-14;3!UBERON:0007616;1.40e-14;3!UBERON:0002217;1.40e-14;3!UBERON:0002018;1.40e-14;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0006915,1.40e-14,3;UBERON:0007616,1.40e-14,3;UBERON:0002217,1.40e-14,3;UBERON:0002018,1.40e-14,3 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.662794751455832,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.28769239232215,0,0,0,0,0,0,0,0,0,0,0,0.329851300186716,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.361439152384566,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.496971951695318,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0821271560138091,0,0,0,0,0,0,0.182091168006717,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154048617114644,0,0,0.107420244868274,0.145016693914229,0.0852266274161009,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.11107635297664,0.658589785919804,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.228234679033192,0,0,0,0,0,0,0,0.307240764308458,0.223676107892416,1.16794399198336,0,0,1.23087398947712,0,0,0,0,0,0,7.91248028370096,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.511572370226872,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.498635045700469,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.54787429224455,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.192619830407303,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.318004350653419,0.0788617450012534,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.462175628631418,0.432626562123789,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112131862580613,0,0,0,0,0,0.0717222053926763,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr10:3094259..3094288,+ | |||
}} |
Revision as of 13:09, 10 September 2013
Short description: | p@chr10:3094259..3094288, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr10:3094259..3094288, + |
Coexpression cluster: | C52_adult_NK_chronic_cord_testis_embryonic_myeloma |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
synovial cell | 1.40e-14 | 3 |
Ontology term | p-value | n |
---|---|---|
stratified squamous epithelium | 1.40e-14 | 3 |
layer of synovial tissue | 1.40e-14 | 3 |
synovial joint | 1.40e-14 | 3 |
synovial membrane of synovial joint | 1.40e-14 | 3 |
Ontology term | p-value | n |
---|---|---|
epithelioid sarcoma | 1.48e-40 | 1 |
mesenchymal cell neoplasm | 4.66e-21 | 2 |
leukemia | 6.08e-10 | 39 |
hematologic cancer | 8.80e-08 | 51 |
immune system cancer | 8.80e-08 | 51 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.