FFCP PHASE1:Hg19::chr10:3878265..3878278,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=N|UniProt=NA|association_with_transcript=NA|coexpression_cluster_id=C6|description=CAGE_peak_at_chr10:3878265..3878278,+|id=chr10:3878265..3878278,+|ontology_enrichment_celltype=CL:0002057!1.50e-55!42;CL:0000860!1.86e-51!45;CL:0000766!9.09e-49!76;CL:0000738!9.76e-45!140;CL:0002009!1.62e-39!65;CL:0002393!2.50e-39!9;CL:0002397!2.50e-39!9;CL:0000557!1.02e-38!71;CL:0000763!4.42e-38!112;CL:0000049!4.42e-38!112;CL:0002194!1.41e-37!63;CL:0000576!1.41e-37!63;CL:0000040!1.41e-37!63;CL:0000559!1.41e-37!63;CL:0000839!3.32e-36!70;CL:0000037!6.48e-35!172;CL:0000566!6.48e-35!172;CL:0000988!1.92e-34!182;CL:0002032!1.34e-30!165;CL:0000837!1.34e-30!165;CL:0002087!1.40e-30!119;CL:0002031!6.03e-27!124;CL:0000767!1.34e-14!3;CL:0000094!3.27e-14!8;CL:0000842!4.92e-14!3;CL:0000875!1.04e-13!3;CL:0002396!1.04e-13!3;CL:0000623!3.09e-13!3;CL:0000825!3.09e-13!3;CL:0000134!2.04e-12!358;CL:0002320!5.16e-12!365;CL:0000080!6.52e-12!6;CL:0000224!1.21e-10!4;CL:0000219!1.35e-10!390;CL:0000081!2.97e-10!11;CL:0000034!6.02e-10!444;CL:0000048!1.06e-09!430;CL:0000723!1.90e-09!436;CL:0000453!2.60e-08!5;CL:0000990!8.34e-08!8|ontology_enrichment_celltype_v019=CL:0002393;4.69e-36;6!CL:0002397;4.69e-36;6!CL:0000767;6.63e-19;3!CL:0000094;1.41e-15;8!CL:0000766;1.06e-13;69!CL:0000576;1.28e-11;48!CL:0000081;1.70e-11;11!CL:0000860;1.41e-08;33!CL:0002057;1.41e-08;33!CL:0000047;8.04e-08;2!CL:0000771;8.04e-08;2|ontology_enrichment_celltype_v019_2=CL:0000766,7.60e-25,72;CL:0000860,1.05e-24,42;CL:0002057,1.05e-24,42;CL:0002393,3.49e-24,9;CL:0002397,3.49e-24,9;CL:0000473,1.65e-21,48;CL:0000234,1.65e-21,48;CL:0000767,6.63e-19,3;CL:0002194,4.95e-17,59;CL:0000576,4.95e-17,59;CL:0000040,4.95e-17,59;CL:0000559,4.95e-17,59;CL:0002009,1.88e-16,61;CL:0000763,3.31e-16,108;CL:0000049,3.31e-16,108;CL:0000094,1.48e-15,8;CL:0000839,3.71e-15,66;CL:0000738,6.06e-15,136;CL:0000557,6.40e-15,67;CL:0000037,7.88e-12,168;CL:0000081,1.76e-11,11;CL:0000988,3.74e-11,177;CL:0002032,1.92e-10,161;CL:0000837,1.92e-10,161;CL:0002087,2.40e-10,115;CL:0002031,5.93e-08,120;CL:0000771,8.60e-08,2|ontology_enrichment_development_v019=CL:0002057;7.22e-17;42|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002390!2.28e-34!102;UBERON:0003061!2.28e-34!102;UBERON:0002371!1.06e-33!80;UBERON:0001474!6.18e-31!86;UBERON:0002193!1.08e-30!112;UBERON:0004765!1.92e-25!101;UBERON:0001434!1.92e-25!101;UBERON:0002405!1.33e-21!115;UBERON:0003081!1.17e-13!216;UBERON:0002204!5.67e-13!167;UBERON:0002384!1.83e-11!375|ontology_enrichment_uberon_v019=|ontology_enrichment_uberon_v019_2=UBERON:0002371,4.57e-13,76;UBERON:0002390,2.55e-12,98;UBERON:0003061,2.55e-12,98;UBERON:0001474,4.72e-12,82;UBERON:0002193,4.38e-11,108;UBERON:0004765,6.59e-11,90;UBERON:0002405,1.58e-10,93;UBERON:0001434,9.93e-10,100|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.14691421479123,0.383829398097213,3.8704030829019,0,0,0,0,0,0,10.5259127621057,5.61524452916397,6.51032612147556,0,0,0,0,0,0,0.464858073811369,0,0,0,0,0.236482229888585,0,2.5819387343353,0,0,0.272906150057846,0,0.918251677112708,1.92557416245656,3.83602275479425,0,0,0,0.870627715885752,0,0,0,0,0.217188844705117,0.605399502633369,2.20966581592539,1.89877432464531,0.211255286311942,1.70083439972035,0.628975936525128,0.22465726229299,0.150176892841506,0.16072558669708,0.285012743741249,0.39783335439818,0.365328307529268,0,0,0,0,0,0,0,0,0,0.587237189370939,0,0,2.24203425192614,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.087834785693126,0,0,0,0,0,0,0.238490624305342,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.31780417436063,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.25248486685276,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.394061520403854,0.215627574859517,0.128343036279748,0,1.30139853857622,0,0,0,0,0,0.414415513436035,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206768026122887,2.15714200818617,0.960548020230999,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19924798825107,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.208843899010911,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.674921674654501,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=N | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C6 | |||
|description=CAGE_peak_at_chr10:3878265..3878278,+ | |||
|id=chr10:3878265..3878278,+ | |||
|ontology_enrichment_celltype=CL:0002057!1.50e-55!42;CL:0000860!1.86e-51!45;CL:0000766!9.09e-49!76;CL:0000738!9.76e-45!140;CL:0002009!1.62e-39!65;CL:0002393!2.50e-39!9;CL:0002397!2.50e-39!9;CL:0000557!1.02e-38!71;CL:0000763!4.42e-38!112;CL:0000049!4.42e-38!112;CL:0002194!1.41e-37!63;CL:0000576!1.41e-37!63;CL:0000040!1.41e-37!63;CL:0000559!1.41e-37!63;CL:0000839!3.32e-36!70;CL:0000037!6.48e-35!172;CL:0000566!6.48e-35!172;CL:0000988!1.92e-34!182;CL:0002032!1.34e-30!165;CL:0000837!1.34e-30!165;CL:0002087!1.40e-30!119;CL:0002031!6.03e-27!124;CL:0000767!1.34e-14!3;CL:0000094!3.27e-14!8;CL:0000842!4.92e-14!3;CL:0000875!1.04e-13!3;CL:0002396!1.04e-13!3;CL:0000623!3.09e-13!3;CL:0000825!3.09e-13!3;CL:0000134!2.04e-12!358;CL:0002320!5.16e-12!365;CL:0000080!6.52e-12!6;CL:0000224!1.21e-10!4;CL:0000219!1.35e-10!390;CL:0000081!2.97e-10!11;CL:0000034!6.02e-10!444;CL:0000048!1.06e-09!430;CL:0000723!1.90e-09!436;CL:0000453!2.60e-08!5;CL:0000990!8.34e-08!8 | |||
|ontology_enrichment_celltype_v019=CL:0002393;4.69e-36;6!CL:0002397;4.69e-36;6!CL:0000767;6.63e-19;3!CL:0000094;1.41e-15;8!CL:0000766;1.06e-13;69!CL:0000576;1.28e-11;48!CL:0000081;1.70e-11;11!CL:0000860;1.41e-08;33!CL:0002057;1.41e-08;33!CL:0000047;8.04e-08;2!CL:0000771;8.04e-08;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000766,7.60e-25,72;CL:0000860,1.05e-24,42;CL:0002057,1.05e-24,42;CL:0002393,3.49e-24,9;CL:0002397,3.49e-24,9;CL:0000473,1.65e-21,48;CL:0000234,1.65e-21,48;CL:0000767,6.63e-19,3;CL:0002194,4.95e-17,59;CL:0000576,4.95e-17,59;CL:0000040,4.95e-17,59;CL:0000559,4.95e-17,59;CL:0002009,1.88e-16,61;CL:0000763,3.31e-16,108;CL:0000049,3.31e-16,108;CL:0000094,1.48e-15,8;CL:0000839,3.71e-15,66;CL:0000738,6.06e-15,136;CL:0000557,6.40e-15,67;CL:0000037,7.88e-12,168;CL:0000081,1.76e-11,11;CL:0000988,3.74e-11,177;CL:0002032,1.92e-10,161;CL:0000837,1.92e-10,161;CL:0002087,2.40e-10,115;CL:0002031,5.93e-08,120;CL:0000771,8.60e-08,2 | |||
|ontology_enrichment_development_v019=CL:0002057;7.22e-17;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!2.28e-34!102;UBERON:0003061!2.28e-34!102;UBERON:0002371!1.06e-33!80;UBERON:0001474!6.18e-31!86;UBERON:0002193!1.08e-30!112;UBERON:0004765!1.92e-25!101;UBERON:0001434!1.92e-25!101;UBERON:0002405!1.33e-21!115;UBERON:0003081!1.17e-13!216;UBERON:0002204!5.67e-13!167;UBERON:0002384!1.83e-11!375 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,4.57e-13,76;UBERON:0002390,2.55e-12,98;UBERON:0003061,2.55e-12,98;UBERON:0001474,4.72e-12,82;UBERON:0002193,4.38e-11,108;UBERON:0004765,6.59e-11,90;UBERON:0002405,1.58e-10,93;UBERON:0001434,9.93e-10,100 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.14691421479123,0.383829398097213,3.8704030829019,0,0,0,0,0,0,10.5259127621057,5.61524452916397,6.51032612147556,0,0,0,0,0,0,0.464858073811369,0,0,0,0,0.236482229888585,0,2.5819387343353,0,0,0.272906150057846,0,0.918251677112708,1.92557416245656,3.83602275479425,0,0,0,0.870627715885752,0,0,0,0,0.217188844705117,0.605399502633369,2.20966581592539,1.89877432464531,0.211255286311942,1.70083439972035,0.628975936525128,0.22465726229299,0.150176892841506,0.16072558669708,0.285012743741249,0.39783335439818,0.365328307529268,0,0,0,0,0,0,0,0,0,0.587237189370939,0,0,2.24203425192614,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.087834785693126,0,0,0,0,0,0,0.238490624305342,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.31780417436063,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.25248486685276,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.394061520403854,0.215627574859517,0.128343036279748,0,1.30139853857622,0,0,0,0,0,0.414415513436035,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206768026122887,2.15714200818617,0.960548020230999,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19924798825107,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.208843899010911,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.674921674654501,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132864840313363,0.327130788511688,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr10:3878265..3878278,+ | |||
}} |
Revision as of 13:22, 10 September 2013
Short description: | p@chr10:3878265..3878278, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr10:3878265..3878278, + |
Coexpression cluster: | C6_CD14_Eosinophils_Basophils_Peripheral_CD34_Natural_immature |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
myeloid leukocyte | 7.60e-25 | 72 |
classical monocyte | 1.05e-24 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.05e-24 | 42 |
intermediate monocyte | 3.49e-24 | 9 |
CD14-positive, CD16-positive monocyte | 3.49e-24 | 9 |
defensive cell | 1.65e-21 | 48 |
phagocyte | 1.65e-21 | 48 |
basophil | 6.63e-19 | 3 |
monopoietic cell | 4.95e-17 | 59 |
monocyte | 4.95e-17 | 59 |
monoblast | 4.95e-17 | 59 |
promonocyte | 4.95e-17 | 59 |
macrophage dendritic cell progenitor | 1.88e-16 | 61 |
myeloid cell | 3.31e-16 | 108 |
common myeloid progenitor | 3.31e-16 | 108 |
granulocyte | 1.48e-15 | 8 |
myeloid lineage restricted progenitor cell | 3.71e-15 | 66 |
leukocyte | 6.06e-15 | 136 |
granulocyte monocyte progenitor cell | 6.40e-15 | 67 |
hematopoietic stem cell | 7.88e-12 | 168 |
blood cell | 1.76e-11 | 11 |
hematopoietic cell | 3.74e-11 | 177 |
hematopoietic oligopotent progenitor cell | 1.92e-10 | 161 |
hematopoietic multipotent progenitor cell | 1.92e-10 | 161 |
nongranular leukocyte | 2.40e-10 | 115 |
hematopoietic lineage restricted progenitor cell | 5.93e-08 | 120 |
eosinophil | 8.60e-08 | 2 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 4.57e-13 | 76 |
hematopoietic system | 2.55e-12 | 98 |
blood island | 2.55e-12 | 98 |
bone element | 4.72e-12 | 82 |
hemolymphoid system | 4.38e-11 | 108 |
skeletal element | 6.59e-11 | 90 |
immune system | 1.58e-10 | 93 |
skeletal system | 9.93e-10 | 100 |
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