FFCP PHASE1:Hg19::chr10:60082527..60082529,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=N|UniProt=NA|association_with_transcript=NA|coexpression_cluster_id=C0|description=CAGE_peak_at_chr10:60082527..60082529,+|id=chr10:60082527..60082529,+|ontology_enrichment_celltype=CL:0002057!3.20e-54!42;CL:0000860!2.17e-50!45;CL:0002194!4.73e-43!63;CL:0000576!4.73e-43!63;CL:0000040!4.73e-43!63;CL:0000559!4.73e-43!63;CL:0002009!1.22e-41!65;CL:0000766!6.45e-39!76;CL:0000839!1.87e-38!70;CL:0000557!7.16e-38!71;CL:0002087!1.03e-31!119;CL:0000738!7.41e-29!140;CL:0000763!5.48e-28!112;CL:0000049!5.48e-28!112;CL:0000037!7.25e-25!172;CL:0000566!7.25e-25!172;CL:0000988!2.80e-23!182;CL:0002031!1.38e-22!124;CL:0000842!1.86e-22!3;CL:0002032!1.00e-19!165;CL:0000837!1.00e-19!165;CL:0000224!5.29e-17!4;CL:0002393!1.31e-13!9;CL:0002397!1.31e-13!9;CL:0000080!1.59e-11!6;CL:0000134!9.52e-10!358;CL:0002320!1.78e-09!365;CL:0000219!1.62e-08!390;CL:0000034!6.94e-08!444;CL:0000048!2.30e-07!430;CL:0000723!3.36e-07!436|ontology_enrichment_celltype_v019=CL:0002393;1.69e-27;6!CL:0002397;1.69e-27;6!CL:0000473;4.96e-20;39!CL:0000234;4.96e-20;39!CL:0000860;1.85e-18;33!CL:0002057;1.85e-18;33!CL:0000766;1.30e-17;69!CL:0000576;1.62e-16;48!CL:0000763;8.48e-08;100!CL:0002087;1.04e-07;104|ontology_enrichment_celltype_v019_2=CL:0000473,6.93e-37,48;CL:0000234,6.93e-37,48;CL:0000860,3.21e-34,42;CL:0002057,3.21e-34,42;CL:0002194,2.01e-29,59;CL:0000576,2.01e-29,59;CL:0000040,2.01e-29,59;CL:0000559,2.01e-29,59;CL:0002009,1.85e-28,61;CL:0000839,2.66e-26,66;CL:0000557,6.58e-26,67;CL:0000766,4.23e-24,72;CL:0002393,1.41e-18,9;CL:0002397,1.41e-18,9;CL:0000763,5.87e-16,108;CL:0000049,5.87e-16,108;CL:0002087,5.86e-15,115;CL:0002031,2.58e-14,120;CL:0000738,1.44e-12,136;CL:0002032,1.61e-10,161;CL:0000837,1.61e-10,161;CL:0000037,4.69e-10,168;CL:0000988,1.65e-09,177|ontology_enrichment_development_v019=CL:0002057;3.83e-22;42|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002390!2.69e-34!102;UBERON:0003061!2.69e-34!102;UBERON:0002371!2.90e-33!80;UBERON:0002193!6.48e-31!112;UBERON:0001474!1.01e-30!86;UBERON:0004765!1.14e-25!101;UBERON:0001434!1.14e-25!101;UBERON:0002405!3.95e-22!115;UBERON:0003081!3.64e-14!216;UBERON:0002204!3.92e-14!167;UBERON:0002384!4.18e-09!375|ontology_enrichment_uberon_v019=|ontology_enrichment_uberon_v019_2=UBERON:0002371,8.03e-23,76;UBERON:0001474,3.91e-21,82;UBERON:0004765,3.14e-19,90;UBERON:0002405,1.35e-18,93;UBERON:0002390,1.25e-17,98;UBERON:0003061,1.25e-17,98;UBERON:0001434,2.87e-17,100;UBERON:0002193,5.87e-16,108;UBERON:0002204,4.05e-10,167;UBERON:0003081,3.37e-08,203|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154816123316076,0,0,0,0,0,0,4.43196326825502,2.00544447470142,4.77423915574874,0,0,0,0,0,0,0,0,0,0.28769239232215,0.256160706529101,0.236482229888585,5.17118521104928,1.29096936716765,5.41705946377367,0,0,0,8.57034898638527,5.45579346029359,12.1474053901818,0.329851300186716,0,0,0,0,0.622822248995575,0,0,0,0.605399502633369,0,0.316462387440884,0,0,0,0.112328631146495,0,0,0,0.19891667719909,0,0,0,0,0,0,0,0,0,0,0,0,0,1.12101712596307,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.476981248610684,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.43247561282381,0,0,0,0,0,0,0,0,0,0.394061520403854,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206768026122887,0.215714200818617,0.74709290462411,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.1605880751037,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p@chr10:60082527..60082529,+}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=N | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C0 | |||
|description=CAGE_peak_at_chr10:60082527..60082529,+ | |||
|id=chr10:60082527..60082529,+ | |||
|ontology_enrichment_celltype=CL:0002057!3.20e-54!42;CL:0000860!2.17e-50!45;CL:0002194!4.73e-43!63;CL:0000576!4.73e-43!63;CL:0000040!4.73e-43!63;CL:0000559!4.73e-43!63;CL:0002009!1.22e-41!65;CL:0000766!6.45e-39!76;CL:0000839!1.87e-38!70;CL:0000557!7.16e-38!71;CL:0002087!1.03e-31!119;CL:0000738!7.41e-29!140;CL:0000763!5.48e-28!112;CL:0000049!5.48e-28!112;CL:0000037!7.25e-25!172;CL:0000566!7.25e-25!172;CL:0000988!2.80e-23!182;CL:0002031!1.38e-22!124;CL:0000842!1.86e-22!3;CL:0002032!1.00e-19!165;CL:0000837!1.00e-19!165;CL:0000224!5.29e-17!4;CL:0002393!1.31e-13!9;CL:0002397!1.31e-13!9;CL:0000080!1.59e-11!6;CL:0000134!9.52e-10!358;CL:0002320!1.78e-09!365;CL:0000219!1.62e-08!390;CL:0000034!6.94e-08!444;CL:0000048!2.30e-07!430;CL:0000723!3.36e-07!436 | |||
|ontology_enrichment_celltype_v019=CL:0002393;1.69e-27;6!CL:0002397;1.69e-27;6!CL:0000473;4.96e-20;39!CL:0000234;4.96e-20;39!CL:0000860;1.85e-18;33!CL:0002057;1.85e-18;33!CL:0000766;1.30e-17;69!CL:0000576;1.62e-16;48!CL:0000763;8.48e-08;100!CL:0002087;1.04e-07;104 | |||
|ontology_enrichment_celltype_v019_2=CL:0000473,6.93e-37,48;CL:0000234,6.93e-37,48;CL:0000860,3.21e-34,42;CL:0002057,3.21e-34,42;CL:0002194,2.01e-29,59;CL:0000576,2.01e-29,59;CL:0000040,2.01e-29,59;CL:0000559,2.01e-29,59;CL:0002009,1.85e-28,61;CL:0000839,2.66e-26,66;CL:0000557,6.58e-26,67;CL:0000766,4.23e-24,72;CL:0002393,1.41e-18,9;CL:0002397,1.41e-18,9;CL:0000763,5.87e-16,108;CL:0000049,5.87e-16,108;CL:0002087,5.86e-15,115;CL:0002031,2.58e-14,120;CL:0000738,1.44e-12,136;CL:0002032,1.61e-10,161;CL:0000837,1.61e-10,161;CL:0000037,4.69e-10,168;CL:0000988,1.65e-09,177 | |||
|ontology_enrichment_development_v019=CL:0002057;3.83e-22;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!2.69e-34!102;UBERON:0003061!2.69e-34!102;UBERON:0002371!2.90e-33!80;UBERON:0002193!6.48e-31!112;UBERON:0001474!1.01e-30!86;UBERON:0004765!1.14e-25!101;UBERON:0001434!1.14e-25!101;UBERON:0002405!3.95e-22!115;UBERON:0003081!3.64e-14!216;UBERON:0002204!3.92e-14!167;UBERON:0002384!4.18e-09!375 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,8.03e-23,76;UBERON:0001474,3.91e-21,82;UBERON:0004765,3.14e-19,90;UBERON:0002405,1.35e-18,93;UBERON:0002390,1.25e-17,98;UBERON:0003061,1.25e-17,98;UBERON:0001434,2.87e-17,100;UBERON:0002193,5.87e-16,108;UBERON:0002204,4.05e-10,167;UBERON:0003081,3.37e-08,203 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154816123316076,0,0,0,0,0,0,4.43196326825502,2.00544447470142,4.77423915574874,0,0,0,0,0,0,0,0,0,0.28769239232215,0.256160706529101,0.236482229888585,5.17118521104928,1.29096936716765,5.41705946377367,0,0,0,8.57034898638527,5.45579346029359,12.1474053901818,0.329851300186716,0,0,0,0,0.622822248995575,0,0,0,0.605399502633369,0,0.316462387440884,0,0,0,0.112328631146495,0,0,0,0.19891667719909,0,0,0,0,0,0,0,0,0,0,0,0,0,1.12101712596307,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.476981248610684,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.43247561282381,0,0,0,0,0,0,0,0,0,0.394061520403854,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206768026122887,0.215714200818617,0.74709290462411,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.1605880751037,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr10:60082527..60082529,+ | |||
}} |
Revision as of 13:43, 10 September 2013
Short description: | p@chr10:60082527..60082529, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr10:60082527..60082529, + |
Coexpression cluster: | C0_CD14_Eosinophils_Neutrophils_Basophils_CD34_immature_Peripheral |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
defensive cell | 6.93e-37 | 48 |
phagocyte | 6.93e-37 | 48 |
classical monocyte | 3.21e-34 | 42 |
CD14-positive, CD16-negative classical monocyte | 3.21e-34 | 42 |
monopoietic cell | 2.01e-29 | 59 |
monocyte | 2.01e-29 | 59 |
monoblast | 2.01e-29 | 59 |
promonocyte | 2.01e-29 | 59 |
macrophage dendritic cell progenitor | 1.85e-28 | 61 |
myeloid lineage restricted progenitor cell | 2.66e-26 | 66 |
granulocyte monocyte progenitor cell | 6.58e-26 | 67 |
myeloid leukocyte | 4.23e-24 | 72 |
intermediate monocyte | 1.41e-18 | 9 |
CD14-positive, CD16-positive monocyte | 1.41e-18 | 9 |
myeloid cell | 5.87e-16 | 108 |
common myeloid progenitor | 5.87e-16 | 108 |
nongranular leukocyte | 5.86e-15 | 115 |
hematopoietic lineage restricted progenitor cell | 2.58e-14 | 120 |
leukocyte | 1.44e-12 | 136 |
hematopoietic oligopotent progenitor cell | 1.61e-10 | 161 |
hematopoietic multipotent progenitor cell | 1.61e-10 | 161 |
hematopoietic stem cell | 4.69e-10 | 168 |
hematopoietic cell | 1.65e-09 | 177 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 8.03e-23 | 76 |
bone element | 3.91e-21 | 82 |
skeletal element | 3.14e-19 | 90 |
immune system | 1.35e-18 | 93 |
hematopoietic system | 1.25e-17 | 98 |
blood island | 1.25e-17 | 98 |
skeletal system | 2.87e-17 | 100 |
hemolymphoid system | 5.87e-16 | 108 |
musculoskeletal system | 4.05e-10 | 167 |
lateral plate mesoderm | 3.37e-08 | 203 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.