FFCP PHASE1:Hg19::chr11:68780701..68780736,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=116535|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=24828|TSSclassifier=S|UniProt=F5H5R4,E9PDW9|association_with_transcript=0bp_to_ENST00000320913,ENST00000421543_5end|description=CAGE_peak_1_at_MRGPRF_5end|id=chr11:68780701..68780736,-|ontology_enrichment_celltype=CL:0000055!1.82e-32!180;CL:0000057!4.10e-21!75;CL:0000680!1.73e-14!57;CL:0000056!1.73e-14!57;CL:0000355!1.73e-14!57;CL:0000183!1.76e-14!59;CL:0000187!4.89e-14!54;CL:0000393!8.29e-14!60;CL:0000211!8.29e-14!60;CL:0000192!2.59e-12!42;CL:0000514!2.59e-12!42;CL:0002620!8.93e-11!23;CL:0000359!2.86e-07!32|ontology_enrichment_celltype_v019=CL:0002620;3.01e-11;23!CL:0000192;4.88e-10;43!CL:0000187;9.88e-09;55!CL:0000057;1.07e-08;73!CL:0000393;5.40e-08;61!CL:0000211;5.40e-08;61!CL:0000359;1.73e-07;32!CL:0002320;3.37e-07;188|ontology_enrichment_celltype_v019_2=CL:0000057,8.45e-22,76;CL:0000680,6.60e-16,58;CL:0000056,6.60e-16,58;CL:0000355,6.60e-16,58;CL:0000187,1.97e-15,55;CL:0000393,2.47e-14,61;CL:0000211,2.47e-14,61;CL:0000192,1.26e-13,43;CL:0000514,1.26e-13,43;CL:0002620,2.77e-11,23;CL:0000359,1.24e-07,32|ontology_enrichment_development_v019=CL:0000514;4.88e-10;43!CL:0000355;9.93e-09;58|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000914!2.32e-22!83;UBERON:0002329!2.32e-22!83;UBERON:0003077!2.32e-22!83;UBERON:0003059!2.32e-22!83;UBERON:0007282!2.32e-22!83;UBERON:0009618!2.32e-22!83;UBERON:0007285!2.32e-22!83;UBERON:0004290!7.85e-19!70;UBERON:0002385!4.03e-16!63;UBERON:0001015!4.03e-16!63;UBERON:0000383!4.03e-16!63;UBERON:0005256!6.22e-16!143;UBERON:0001134!3.17e-15!61;UBERON:0002036!3.17e-15!61;UBERON:0003082!3.17e-15!61;UBERON:0000486!1.09e-14!82;UBERON:0000475!3.43e-14!365;UBERON:0000481!5.63e-12!347;UBERON:0002100!7.10e-10!216;UBERON:0003102!7.97e-10!95;UBERON:0000468!2.31e-09!659;UBERON:0007023!6.37e-09!115;UBERON:0002199!2.48e-07!45;UBERON:0002416!2.48e-07!45;UBERON:0003104!2.80e-07!238;UBERON:0009142!2.80e-07!238|ontology_enrichment_uberon_v019=UBERON:0002385;5.31e-08;31!UBERON:0001015;5.31e-08;31!UBERON:0000383;5.31e-08;31!UBERON:0002384;8.33e-08;198|ontology_enrichment_uberon_v019_2=UBERON:0007524,1.54e-20,73;UBERON:0002329,4.65e-20,71;UBERON:0003059,4.65e-20,71;UBERON:0007282,4.65e-20,71;UBERON:0004290,4.65e-20,71;UBERON:0009618,4.65e-20,71;UBERON:0003077,4.81e-20,72;UBERON:0007285,4.81e-20,72;UBERON:0007503,1.22e-17,78;UBERON:0002385,3.42e-17,64;UBERON:0001015,3.42e-17,64;UBERON:0000383,3.42e-17,64;UBERON:0001134,3.03e-16,62;UBERON:0002036,3.03e-16,62;UBERON:0003082,3.03e-16,62;UBERON:0000486,4.22e-16,83;UBERON:0003104,4.00e-15,160;UBERON:0009142,4.00e-15,160;UBERON:0005256,8.95e-14,122;UBERON:0003102,1.45e-09,99;UBERON:0002199,3.20e-08,46;UBERON:0002416,3.20e-08,46;UBERON:0007023,4.16e-08,114;UBERON:0000479,9.07e-08,773;UBERON:0002100,1.22e-07,199;UBERON:0002097,2.46e-07,41|phase1_expression=5.08699461957559,6.20891519283851,11.8401699440616,11.0080628188443,16.0905993993824,15.7020934338066,0,10.7392378482561,33.4317604095793,0.982935746006035,1.39560233594486,0.218441372130172,0.791300934685361,38.7388684764946,59.3201302552969,6.05092631806598,4.82155622419182,5.11217063271161,9.27072317701963,16.0057375499824,11.4240387096782,30.4051079833745,1.71741592278634,6.56997240349844,1.50651167513763,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.605399502633369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.263384084775077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.87613732627923,2.68280343881454,2.81297636055767,33.9752803241492,49.1311152423172,46.2060395485028,1.5905718941022,12.6525066278685,5.10488012685966,1.77383517970051,1.05401742831751,23.3797649763417,0,0,0,0,0.531831842075461,0,0,0,0,1.72046919021225,0,0,0,0,0,0,0.71153252537342,0,0,0,0.24406205754817,0,0,0,0,0,0,0,0,0,0,0,9.44246708221105,6.20489507156441,6.62045904066094,41.8781466293268,11.7040566125458,7.8494864019923,0,0.74000264525148,3.42332138939743,0.269421344139376,0,13.0167387774641,6.91411109375999,5.62371436401112,26.2214464537469,6.84566185853339,23.1645454855292,5.87172493218824,12.6260896607143,16.7136459975676,17.3531045566659,26.7778811739654,34.4074851315299,39.2040942903078,64.7839354709819,15.4727431529464,24.4330168217521,19.3586531047176,18.1421853814348,20.7798086613137,35.118209670467,36.1655599042843,47.9259407912044,1.24775401476023,36.416096044839,22.4235258259496,18.2261434997223,52.215850718686,19.8891381430187,20.0959621235591,18.4255687768274,31.2236214646343,11.0103815832154,27.7677151668526,25.0375724307054,22.4688018978149,40.8261031394106,11.1834829032681,25.9427706235046,0,0,0,2.31750041646231,2.38553582978673,2.32387885739037,4.87206958572241,5.55105871926382,4.01475094983413,57.8863269620319,117.069850751105,31.7710319110705,15.3241416250553,24.5439023767659,0,0,0,0,0,0,0,0,0,0.738155454624648,0,9.8777762719536,14.700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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=116535 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=24828 | |||
|TSSclassifier=S | |||
|UniProt=F5H5R4,E9PDW9 | |||
|association_with_transcript=0bp_to_ENST00000320913,ENST00000421543_5end | |||
|description=CAGE_peak_1_at_MRGPRF_5end | |||
|id=chr11:68780701..68780736,- | |||
|ontology_enrichment_celltype=CL:0000055!1.82e-32!180;CL:0000057!4.10e-21!75;CL:0000680!1.73e-14!57;CL:0000056!1.73e-14!57;CL:0000355!1.73e-14!57;CL:0000183!1.76e-14!59;CL:0000187!4.89e-14!54;CL:0000393!8.29e-14!60;CL:0000211!8.29e-14!60;CL:0000192!2.59e-12!42;CL:0000514!2.59e-12!42;CL:0002620!8.93e-11!23;CL:0000359!2.86e-07!32 | |||
|ontology_enrichment_celltype_v019=CL:0002620;3.01e-11;23!CL:0000192;4.88e-10;43!CL:0000187;9.88e-09;55!CL:0000057;1.07e-08;73!CL:0000393;5.40e-08;61!CL:0000211;5.40e-08;61!CL:0000359;1.73e-07;32!CL:0002320;3.37e-07;188 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,8.45e-22,76;CL:0000680,6.60e-16,58;CL:0000056,6.60e-16,58;CL:0000355,6.60e-16,58;CL:0000187,1.97e-15,55;CL:0000393,2.47e-14,61;CL:0000211,2.47e-14,61;CL:0000192,1.26e-13,43;CL:0000514,1.26e-13,43;CL:0002620,2.77e-11,23;CL:0000359,1.24e-07,32 | |||
|ontology_enrichment_development_v019=CL:0000514;4.88e-10;43!CL:0000355;9.93e-09;58 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000914!2.32e-22!83;UBERON:0002329!2.32e-22!83;UBERON:0003077!2.32e-22!83;UBERON:0003059!2.32e-22!83;UBERON:0007282!2.32e-22!83;UBERON:0009618!2.32e-22!83;UBERON:0007285!2.32e-22!83;UBERON:0004290!7.85e-19!70;UBERON:0002385!4.03e-16!63;UBERON:0001015!4.03e-16!63;UBERON:0000383!4.03e-16!63;UBERON:0005256!6.22e-16!143;UBERON:0001134!3.17e-15!61;UBERON:0002036!3.17e-15!61;UBERON:0003082!3.17e-15!61;UBERON:0000486!1.09e-14!82;UBERON:0000475!3.43e-14!365;UBERON:0000481!5.63e-12!347;UBERON:0002100!7.10e-10!216;UBERON:0003102!7.97e-10!95;UBERON:0000468!2.31e-09!659;UBERON:0007023!6.37e-09!115;UBERON:0002199!2.48e-07!45;UBERON:0002416!2.48e-07!45;UBERON:0003104!2.80e-07!238;UBERON:0009142!2.80e-07!238 | |||
|ontology_enrichment_uberon_v019=UBERON:0002385;5.31e-08;31!UBERON:0001015;5.31e-08;31!UBERON:0000383;5.31e-08;31!UBERON:0002384;8.33e-08;198 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007524,1.54e-20,73;UBERON:0002329,4.65e-20,71;UBERON:0003059,4.65e-20,71;UBERON:0007282,4.65e-20,71;UBERON:0004290,4.65e-20,71;UBERON:0009618,4.65e-20,71;UBERON:0003077,4.81e-20,72;UBERON:0007285,4.81e-20,72;UBERON:0007503,1.22e-17,78;UBERON:0002385,3.42e-17,64;UBERON:0001015,3.42e-17,64;UBERON:0000383,3.42e-17,64;UBERON:0001134,3.03e-16,62;UBERON:0002036,3.03e-16,62;UBERON:0003082,3.03e-16,62;UBERON:0000486,4.22e-16,83;UBERON:0003104,4.00e-15,160;UBERON:0009142,4.00e-15,160;UBERON:0005256,8.95e-14,122;UBERON:0003102,1.45e-09,99;UBERON:0002199,3.20e-08,46;UBERON:0002416,3.20e-08,46;UBERON:0007023,4.16e-08,114;UBERON:0000479,9.07e-08,773;UBERON:0002100,1.22e-07,199;UBERON:0002097,2.46e-07,41 | |||
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| |||
|short_description=p1@MRGPRF | |||
}} |
Revision as of 19:21, 10 September 2013
Short description: | p1@MRGPRF |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_MRGPRF_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000320913, ENST00000421543_5end |
EntrezGene: | MRGPRF |
HGNC: | 24828 |
UniProt: | F5H5R4E9PDW9 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 8.45e-22 | 76 |
muscle precursor cell | 6.60e-16 | 58 |
myoblast | 6.60e-16 | 58 |
multi-potent skeletal muscle stem cell | 6.60e-16 | 58 |
muscle cell | 1.97e-15 | 55 |
electrically responsive cell | 2.47e-14 | 61 |
electrically active cell | 2.47e-14 | 61 |
smooth muscle cell | 1.26e-13 | 43 |
smooth muscle myoblast | 1.26e-13 | 43 |
skin fibroblast | 2.77e-11 | 23 |
vascular associated smooth muscle cell | 1.24e-07 | 32 |
Ontology term | p-value | n |
---|---|---|
dense mesenchyme tissue | 1.54e-20 | 73 |
somite | 4.65e-20 | 71 |
presomitic mesoderm | 4.65e-20 | 71 |
presumptive segmental plate | 4.65e-20 | 71 |
dermomyotome | 4.65e-20 | 71 |
trunk paraxial mesoderm | 4.65e-20 | 71 |
paraxial mesoderm | 4.81e-20 | 72 |
presumptive paraxial mesoderm | 4.81e-20 | 72 |
epithelial vesicle | 1.22e-17 | 78 |
muscle tissue | 3.42e-17 | 64 |
musculature | 3.42e-17 | 64 |
musculature of body | 3.42e-17 | 64 |
skeletal muscle tissue | 3.03e-16 | 62 |
striated muscle tissue | 3.03e-16 | 62 |
myotome | 3.03e-16 | 62 |
multilaminar epithelium | 4.22e-16 | 83 |
mesenchyme | 4.00e-15 | 160 |
entire embryonic mesenchyme | 4.00e-15 | 160 |
trunk mesenchyme | 8.95e-14 | 122 |
surface structure | 1.45e-09 | 99 |
integument | 3.20e-08 | 46 |
integumental system | 3.20e-08 | 46 |
adult organism | 4.16e-08 | 114 |
tissue | 9.07e-08 | 773 |
trunk | 1.22e-07 | 199 |
skin of body | 2.46e-07 | 41 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.