FFCP PHASE1:Hg19::chr11:71752057..71752068,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=4926|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=8059|TSSclassifier=S|UniProt=|association_with_transcript=63bp_to_ENST00000536119,uc009ysx.1,uc009ysy.1_5end|description=CAGE_peak_15_at_NUMA1_5end|id=chr11:71752057..71752068,-|ontology_enrichment_celltype=CL:0000791!3.99e-08!18;CL:0000789!3.99e-08!18;CL:0002420!3.99e-08!18;CL:0002419!3.99e-08!18;CL:0000790!3.99e-08!18|ontology_enrichment_celltype_v019=CL:0000791;4.94e-20;18!CL:0000789;4.94e-20;18!CL:0002419;4.94e-20;18!CL:0000084;9.38e-17;25!CL:0000624;1.36e-16;6!CL:0000623;2.69e-12;3!CL:0000625;1.11e-08;11!CL:0000542;3.03e-07;53|ontology_enrichment_celltype_v019_2=CL:0000791,2.94e-20,18;CL:0000789,2.94e-20,18;CL:0002420,2.94e-20,18;CL:0002419,2.94e-20,18;CL:0000790,2.94e-20,18;CL:0000084,5.51e-17,25;CL:0000827,5.51e-17,25;CL:0000624,1.00e-16,6;CL:0000838,1.69e-13,52;CL:0000542,3.55e-13,53;CL:0000051,3.55e-13,53;CL:0000623,2.04e-12,3;CL:0000825,2.04e-12,3;CL:0000625,8.55e-09,11|ontology_enrichment_development_v019=CL:0000790;4.94e-20;18!CL:0000051;3.03e-07;53|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0007023!7.18e-19!115;UBERON:0001049!3.82e-11!57;UBERON:0005068!3.82e-11!57;UBERON:0006241!3.82e-11!57;UBERON:0007135!3.82e-11!57;UBERON:0002346!5.72e-11!90;UBERON:0002780!7.21e-10!41;UBERON:0001890!7.21e-10!41;UBERON:0006240!7.21e-10!41;UBERON:0003075!1.05e-09!86;UBERON:0007284!1.05e-09!86;UBERON:0000073!1.30e-09!94;UBERON:0001016!1.30e-09!94;UBERON:0002616!1.64e-09!59;UBERON:0003080!2.39e-09!42;UBERON:0005743!2.60e-09!86;UBERON:0001017!8.27e-09!82;UBERON:0002791!2.98e-08!33;UBERON:0002020!3.19e-08!34;UBERON:0003528!3.19e-08!34;UBERON:0001893!3.47e-08!34;UBERON:0003056!7.14e-08!61;UBERON:0000955!9.65e-08!69;UBERON:0006238!9.65e-08!69;UBERON:0001869!1.77e-07!32;UBERON:0000153!2.03e-07!129;UBERON:0007811!2.03e-07!129;UBERON:0000956!4.14e-07!25;UBERON:0000203!4.14e-07!25;UBERON:0001950!9.94e-07!20|ontology_enrichment_uberon_v019=UBERON:0002370;1.69e-08;2!UBERON:0005162;1.69e-08;2!UBERON:0000122;1.69e-08;2!UBERON:0005058;1.69e-08;2!UBERON:0009113;1.69e-08;2|ontology_enrichment_uberon_v019_2=UBERON:0002370,2.68e-09,4;UBERON:0005058,2.68e-09,4;UBERON:0009113,2.68e-09,4;UBERON:0003295,2.68e-09,4;UBERON:0005562,2.68e-09,4;UBERON:0005162,2.90e-08,2;UBERON:0000122,2.90e-08,2|phase1_expression=0.181678379270557,0,0,0,0,0,0,0,0,0,0,0,0.263766978228454,0.74259811776028,0,0,0,0.730310090387373,0,0,0,1.56727360739044,0.572471974262113,0.273748850145768,0.125542639594803,0.0764134057479513,0.0821005894499457,0.157421562627358,0,0.767658796194425,0.154816123316076,0,0.30120591877825,0,0.154934401160603,0,0.587200878669695,0,0,0.868043482863407,0.223915474239924,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.306083892370903,0,0.639337125799041,0,0,0,0.290209238628584,0,0.622822248995575,0,0,0,0,0,0.316462387440884,0,0,0,0.112328631146495,0,0,0,0,0,0,0,0.889509253863555,0.426730222566507,0.400395987036012,0,0,0,0,1.17447437874188,0,1.32171328579026,0.560508562981536,0.263384084775077,2.360517241366,1.17903228824749,2.05601498999509,0.501559486172034,3.91106719960308,5.20792586308207,1.94826728407911,0.557052284425868,0.294605907474837,0.664601683750863,0.812411591295047,0.128091319725675,0.260118695119756,0.328875809207352,0.552700035571697,0.289803085735052,2.96573126324121,3.47803076516627,3.1360657141493,0,1.91610246800961,0.68725489096526,1.77113784413652,0.95569624297229,0.651083453856419,0,1.95747654801105,2.17577238962511,0,2.13099526839615,0.821127996921047,0.403213486449465,1.87208137048455,1.01377082717959,0,0,0,0,0,0.144846518960824,0,0.973269740605272,0.850813354476611,0,0,0.458426764241994,0.364295288292542,0,0,0,0,0,1.14398982156026,0,0.596287222100115,0,0,0,0,0,0,0.516833518338658,0,0,0,0,0,0,0,0.17859945656816,0,0.112611480483322,0,0,0.366403487860815,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.908144565869588,0.576175924479999,0,0,0,0.298897361103602,0,0,0,0.204154171254893,0.122834317311768,0.103325781175765,0,0,0,0,0,0,0,0,0,0.150238058906597,0,0,0.213557388818567,0.211931901159562,0.600182192168805,0.103052529238439,0.515281080091258,0.18611685633159,0.168776332241266,0,0,0,0.161646056818812,0,0.10075209822764,0.169560592310488,0,0,0.286804595389004,0.243947412259191,0,0.116193942869518,0.207322110030741,0.252320850875628,0,0,0,0,0,0,0,0,0,0,0.217879444092406,0,0.134831308160164,0,0,0,0,0.4115740113314,0,0,0,0,0,0.122988438543114,0.171567810298526,0,0,0,0.277765335475589,0,0,0,0.463721619900307,0.117408694235822,0,0.462985512576611,0,0.790204397959275,3.43394464837949,0,0,0,0,0,0,0,0,0,0.492663237895943,0.176096868026452,1.24396869324463,0,0.50496973370552,0.126995788584338,0.381988425558278,0,0,0.102827492703324,0,0,0.112131084345361,0,0.07333828582095,0.129271715757778,0,0,0,1.04007436911366,0,0,0,0,0,0,0.325736184293735,0,0,0.301439377059586,0,0,0,0,0,0,0,0,0.144781306667579,0,0,0,2.95546140302891,1.50939302401662,1.283430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47911,0.217716747896961,0.684466602170562,1.54909721933551,0.860666464712116,0.99798106963804,0.325613074443898,0.106727345877715,3.8614456457388,0.0898252021065869,0,1.71138021856013,0.813792356631477,0,1.61019034872821,0|short_description=p15@NUMA1}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=4926 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=8059 | |||
|TSSclassifier=S | |||
|UniProt= | |||
|association_with_transcript=63bp_to_ENST00000536119,uc009ysx.1,uc009ysy.1_5end | |||
|description=CAGE_peak_15_at_NUMA1_5end | |||
|id=chr11:71752057..71752068,- | |||
|ontology_enrichment_celltype=CL:0000791!3.99e-08!18;CL:0000789!3.99e-08!18;CL:0002420!3.99e-08!18;CL:0002419!3.99e-08!18;CL:0000790!3.99e-08!18 | |||
|ontology_enrichment_celltype_v019=CL:0000791;4.94e-20;18!CL:0000789;4.94e-20;18!CL:0002419;4.94e-20;18!CL:0000084;9.38e-17;25!CL:0000624;1.36e-16;6!CL:0000623;2.69e-12;3!CL:0000625;1.11e-08;11!CL:0000542;3.03e-07;53 | |||
|ontology_enrichment_celltype_v019_2=CL:0000791,2.94e-20,18;CL:0000789,2.94e-20,18;CL:0002420,2.94e-20,18;CL:0002419,2.94e-20,18;CL:0000790,2.94e-20,18;CL:0000084,5.51e-17,25;CL:0000827,5.51e-17,25;CL:0000624,1.00e-16,6;CL:0000838,1.69e-13,52;CL:0000542,3.55e-13,53;CL:0000051,3.55e-13,53;CL:0000623,2.04e-12,3;CL:0000825,2.04e-12,3;CL:0000625,8.55e-09,11 | |||
|ontology_enrichment_development_v019=CL:0000790;4.94e-20;18!CL:0000051;3.03e-07;53 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!7.18e-19!115;UBERON:0001049!3.82e-11!57;UBERON:0005068!3.82e-11!57;UBERON:0006241!3.82e-11!57;UBERON:0007135!3.82e-11!57;UBERON:0002346!5.72e-11!90;UBERON:0002780!7.21e-10!41;UBERON:0001890!7.21e-10!41;UBERON:0006240!7.21e-10!41;UBERON:0003075!1.05e-09!86;UBERON:0007284!1.05e-09!86;UBERON:0000073!1.30e-09!94;UBERON:0001016!1.30e-09!94;UBERON:0002616!1.64e-09!59;UBERON:0003080!2.39e-09!42;UBERON:0005743!2.60e-09!86;UBERON:0001017!8.27e-09!82;UBERON:0002791!2.98e-08!33;UBERON:0002020!3.19e-08!34;UBERON:0003528!3.19e-08!34;UBERON:0001893!3.47e-08!34;UBERON:0003056!7.14e-08!61;UBERON:0000955!9.65e-08!69;UBERON:0006238!9.65e-08!69;UBERON:0001869!1.77e-07!32;UBERON:0000153!2.03e-07!129;UBERON:0007811!2.03e-07!129;UBERON:0000956!4.14e-07!25;UBERON:0000203!4.14e-07!25;UBERON:0001950!9.94e-07!20 | |||
|ontology_enrichment_uberon_v019=UBERON:0002370;1.69e-08;2!UBERON:0005162;1.69e-08;2!UBERON:0000122;1.69e-08;2!UBERON:0005058;1.69e-08;2!UBERON:0009113;1.69e-08;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002370,2.68e-09,4;UBERON:0005058,2.68e-09,4;UBERON:0009113,2.68e-09,4;UBERON:0003295,2.68e-09,4;UBERON:0005562,2.68e-09,4;UBERON:0005162,2.90e-08,2;UBERON:0000122,2.90e-08,2 | |||
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| |||
|short_description=p15@NUMA1 | |||
}} |
Revision as of 19:29, 10 September 2013
Short description: | p15@NUMA1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_15_at_NUMA1_5end |
Coexpression cluster: | NA |
Association with transcript: | 63bp_to_ENST00000536119, uc009ysx.1, uc009ysy.1_5end |
EntrezGene: | NUMA1 |
HGNC: | 8059 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mature alpha-beta T cell | 2.94e-20 | 18 |
alpha-beta T cell | 2.94e-20 | 18 |
immature T cell | 2.94e-20 | 18 |
mature T cell | 2.94e-20 | 18 |
immature alpha-beta T cell | 2.94e-20 | 18 |
T cell | 5.51e-17 | 25 |
pro-T cell | 5.51e-17 | 25 |
CD4-positive, alpha-beta T cell | 1.00e-16 | 6 |
lymphoid lineage restricted progenitor cell | 1.69e-13 | 52 |
lymphocyte | 3.55e-13 | 53 |
common lymphoid progenitor | 3.55e-13 | 53 |
natural killer cell | 2.04e-12 | 3 |
pro-NK cell | 2.04e-12 | 3 |
CD8-positive, alpha-beta T cell | 8.55e-09 | 11 |
Ontology term | p-value | n |
---|---|---|
thymus | 2.68e-09 | 4 |
hemolymphoid system gland | 2.68e-09 | 4 |
thymic region | 2.68e-09 | 4 |
pharyngeal gland | 2.68e-09 | 4 |
thymus primordium | 2.68e-09 | 4 |
multi cell component structure | 2.90e-08 | 2 |
neuron projection bundle | 2.90e-08 | 2 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.