FFCP PHASE1:Hg19::chr11:788579..788588,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=51286|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=24153|TSSclassifier=S|UniProt=Q8N111|association_with_transcript=69bp_to_AF235030_5end|coexpression_cluster_id=C149|description=CAGE_peak_10_at_CEND1_5end|id=chr11:788579..788588,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_development_v019=UBERON:0006241;5.96e-34;3!UBERON:0003057;5.96e-34;3|ontology_enrichment_disease=DOID:0060060!4.11e-08!1;DOID:0060061!4.11e-08!1;DOID:8691!4.11e-08!1|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001893!3.08e-29!34;UBERON:0000200!4.48e-27!6;UBERON:0001869!1.89e-26!32;UBERON:0001049!3.93e-26!57;UBERON:0005068!3.93e-26!57;UBERON:0006241!3.93e-26!57;UBERON:0007135!3.93e-26!57;UBERON:0002791!1.10e-25!33;UBERON:0001017!6.20e-25!82;UBERON:0002020!6.85e-25!34;UBERON:0003528!6.85e-25!34;UBERON:0002780!5.86e-24!41;UBERON:0001890!5.86e-24!41;UBERON:0006240!5.86e-24!41;UBERON:0000956!8.21e-24!25;UBERON:0000203!8.21e-24!25;UBERON:0005743!1.25e-23!86;UBERON:0003080!2.41e-23!42;UBERON:0002619!5.10e-22!22;UBERON:0002616!7.68e-22!59;UBERON:0000073!4.34e-21!94;UBERON:0001016!4.34e-21!94;UBERON:0000955!9.73e-21!69;UBERON:0006238!9.73e-21!69;UBERON:0001950!2.98e-19!20;UBERON:0003075!1.04e-18!86;UBERON:0007284!1.04e-18!86;UBERON:0002346!9.75e-18!90;UBERON:0003056!1.93e-15!61;UBERON:0000033!5.92e-12!123;UBERON:0007023!1.32e-11!115;UBERON:0000153!2.97e-11!129;UBERON:0007811!2.97e-11!129;UBERON:0004121!2.98e-10!169;UBERON:0000924!6.21e-10!173;UBERON:0006601!6.21e-10!173;UBERON:0002771!1.40e-09!3;UBERON:0000025!1.31e-08!194;UBERON:0002702!1.91e-08!1;UBERON:0003112!5.79e-08!1;UBERON:0000032!5.79e-08!1;UBERON:0005253!5.79e-08!1;UBERON:0003128!5.79e-08!1;UBERON:0002241!5.79e-08!1;UBERON:0001703!5.79e-08!1;UBERON:0004761!5.79e-08!1;UBERON:0009617!5.79e-08!1;UBERON:0002038!6.19e-08!1;UBERON:0009661!6.19e-08!1;UBERON:0001871!7.96e-08!7;UBERON:0007190!1.06e-07!1;UBERON:0002581!1.14e-07!1;UBERON:0001882!1.21e-07!1;UBERON:0005403!1.21e-07!1;UBERON:0004111!4.23e-07!241|ontology_enrichment_uberon_v019=UBERON:0002240;5.96e-34;3!UBERON:0005174;5.96e-34;3!UBERON:0001137;5.96e-34;3!UBERON:0002021;4.21e-21;5|ontology_enrichment_uberon_v019_2=UBERON:0002240,5.96e-34,3;UBERON:0005174,5.96e-34,3;UBERON:0001137,5.96e-34,3;UBERON:0002021,4.21e-21,5;UBERON:0001049,3.28e-08,56;UBERON:0005068,3.28e-08,56;UBERON:0006241,3.28e-08,56;UBERON:0007135,3.28e-08,56;UBERON:0003076,5.93e-08,15;UBERON:0003057,5.93e-08,15|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136874425072884,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.270803863765016,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.130979075497713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.354668382198357,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.254094624222463,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.177561725313127,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18532421910392,0,0,0,0,0,0,0.318203247925937,0,0,0,0,0,0,0,0,0,0,0,0.141405431953713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.278304294485554,0,0,0,0,0,0,0,0,0,0,0,0,0,0.221158519862449,0.295547618953547,0.219385397153973,0,0,0,0,0,0,0,0,0.183195186803725,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136203406111576,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.886068179966986,0,0.1251909307065,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138258436151731,0,0,0,0,0,0,0.19998739585493,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0642292250964595,0,0,5.9483745629819,0.252071696221718,0,0.161475645631851,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0675375846183947,0,0.206686796501184,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0657727735628491,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.198950775161368,0,0,0,0,0,0,0,0,0,0,0,1.6906229103336,0,0,0,0,0,0,0,0,0,0.143339583151451,0,0.135982980381829,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p10@CEND1}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=51286 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=24153 | |||
|TSSclassifier=S | |||
|UniProt=Q8N111 | |||
|association_with_transcript=69bp_to_AF235030_5end | |||
|coexpression_cluster_id=C149 | |||
|description=CAGE_peak_10_at_CEND1_5end | |||
|id=chr11:788579..788588,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006241;5.96e-34;3!UBERON:0003057;5.96e-34;3 | |||
|ontology_enrichment_disease=DOID:0060060!4.11e-08!1;DOID:0060061!4.11e-08!1;DOID:8691!4.11e-08!1 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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|ontology_enrichment_uberon_v019=UBERON:0002240;5.96e-34;3!UBERON:0005174;5.96e-34;3!UBERON:0001137;5.96e-34;3!UBERON:0002021;4.21e-21;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002240,5.96e-34,3;UBERON:0005174,5.96e-34,3;UBERON:0001137,5.96e-34,3;UBERON:0002021,4.21e-21,5;UBERON:0001049,3.28e-08,56;UBERON:0005068,3.28e-08,56;UBERON:0006241,3.28e-08,56;UBERON:0007135,3.28e-08,56;UBERON:0003076,5.93e-08,15;UBERON:0003057,5.93e-08,15 | |||
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|short_description=p10@CEND1 | |||
}} |
Revision as of 19:51, 10 September 2013
Short description: | p10@CEND1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_10_at_CEND1_5end |
Coexpression cluster: | C149_occipital_medial_brain_amygdala_parietal_cerebral_cerebellum |
Association with transcript: | 69bp_to_AF235030_5end |
EntrezGene: | CEND1 |
HGNC: | 24153 |
UniProt: | Q8N111 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
spinal cord | 5.96e-34 | 3 |
dorsal region element | 5.96e-34 | 3 |
dorsum | 5.96e-34 | 3 |
occipital lobe | 4.21e-21 | 5 |
neural tube | 3.28e-08 | 56 |
neural rod | 3.28e-08 | 56 |
future spinal cord | 3.28e-08 | 56 |
neural keel | 3.28e-08 | 56 |
posterior neural tube | 5.93e-08 | 15 |
chordal neural plate | 5.93e-08 | 15 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.