FFCP PHASE1:Hg19::chr11:85759876..85759880,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=N|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr11:85759876..85759880,-|id=chr11:85759876..85759880,-|ontology_enrichment_celltype=CL:0000766!1.90e-12!76;CL:0002057!8.35e-12!42;CL:0000738!8.41e-12!140;CL:0000860!1.47e-11!45;CL:0000037!1.17e-10!172;CL:0000566!1.17e-10!172;CL:0002032!1.70e-10!165;CL:0000837!1.70e-10!165;CL:0002087!1.81e-10!119;CL:0000839!6.23e-10!70;CL:0000763!9.01e-10!112;CL:0000049!9.01e-10!112;CL:0002194!1.72e-09!63;CL:0000576!1.72e-09!63;CL:0000040!1.72e-09!63;CL:0000559!1.72e-09!63;CL:0000988!2.62e-09!182;CL:0002031!3.54e-09!124;CL:0002009!9.71e-09!65;CL:0000557!2.32e-08!71|ontology_enrichment_celltype_v019=CL:0000775;1.27e-15;3!CL:0000094;2.75e-15;8!CL:0000081;4.87e-11;11!CL:0002393;9.51e-08;6!CL:0002397;9.51e-08;6!CL:0000226;1.97e-07;3!CL:0000842;1.97e-07;3!CL:0000623;3.69e-07;3!CL:0000766;5.34e-07;69|ontology_enrichment_celltype_v019_2=CL:0000766,4.22e-17,72;CL:0000775,7.56e-16,3;CL:0000094,1.18e-15,8;CL:0000738,4.96e-13,136;CL:0000763,1.83e-11,108;CL:0000049,1.83e-11,108;CL:0000860,2.41e-11,42;CL:0002057,2.41e-11,42;CL:0000081,2.66e-11,11;CL:0000037,1.11e-10,168;CL:0002194,1.71e-10,59;CL:0000576,1.71e-10,59;CL:0000040,1.71e-10,59;CL:0000559,1.71e-10,59;CL:0002009,4.55e-10,61;CL:0000988,7.13e-10,177;CL:0000473,1.17e-09,48;CL:0000234,1.17e-09,48;CL:0002032,4.01e-09,161;CL:0000837,4.01e-09,161;CL:0000839,4.05e-09,66;CL:0002087,5.50e-09,115;CL:0000557,6.03e-09,67;CL:0002393,1.08e-08,9;CL:0002397,1.08e-08,9;CL:0000226,2.11e-07,3;CL:0000842,2.11e-07,3;CL:0000623,6.47e-07,3;CL:0000825,6.47e-07,3|ontology_enrichment_development_v019=CL:0002057;1.42e-09;42|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0007023!4.61e-12!115;UBERON:0002390!1.39e-08!102;UBERON:0003061!1.39e-08!102;UBERON:0002193!8.36e-08!112|ontology_enrichment_uberon_v019=UBERON:0000178;1.05e-07;15!UBERON:0000179;1.05e-07;15!UBERON:0000463;1.05e-07;15|ontology_enrichment_uberon_v019_2=UBERON:0002390,3.16e-11,98;UBERON:0003061,3.16e-11,98;UBERON:0002193,7.78e-10,108;UBERON:0002371,1.35e-07,76;UBERON:0000178,1.37e-07,15;UBERON:0000179,1.37e-07,15;UBERON:0000463,1.37e-07,15;UBERON:0001474,7.30e-07,82|phase1_expression=0.181678379270557,0.214100523890983,0,0,0,0,0,0,0,0,0,0,0,0,0,0.672325146451775,0,0.730310090387373,0,0,0,0,0.85870796139317,0.136874425072884,0.125542639594803,0.382067028739756,0.164201178899891,0.157421562627358,0.786728553697808,1.91914699048606,0.309632246632152,0,0,0,0.154934401160603,0.142169232487422,0,2.21598163412751,1.20326668482085,1.95309783644267,0.223915474239924,0,0.515151135268373,0.436194716338694,0.377875943688809,0.242584061187816,0.697287110717054,0.411167888021826,0.929119112685311,1.7261543539329,0.256160706529101,0,1.03423704220986,1.29096936716765,0,0.188242339542605,0.272906150057846,0,0.306083892370903,0,1.91801137739712,0.329851300186716,0.797854630486527,0.852449501065388,1.16083695451434,0,0,0.502497330513487,0,0.217188844705117,0.605399502633369,0.736555271975129,0,0.422510572623884,0.425208599930087,0.209658645508376,1.12328631146495,0.750884464207532,1.28580469357664,0.855038231223746,0.79566670879636,1.0959849225878,0,0,0,0,0.400395987036012,0,0,0.954053754535364,0,0,0,0,0,0,0.786839080455332,1.17903228824749,0.205601498999509,0.167186495390678,0,0,0,0.111410456885174,0,0.664601683750863,0,0.768547918354051,0.520237390239513,0.493313713811028,0.552700035571697,0,0.14828656316206,0,0,0,0,0,0.506039384039006,0,0.651083453856419,0,0.150575119077773,0,0,0,0,0.604820229674197,0.802320587350522,0.289648807765598,0,0,0,0,0,0.289693037921647,0,0,0.378139268656271,0.443458794925128,0.263504357079378,0.458426764241994,0,0,0,1.74129737299267,1.32957960518865,0.476981248610684,0,0,0,0,0,0,0,0,0,0.258416759169329,0,0.33472061276467,0,0,0,0,0,0.267899184852239,0,0,0,0,0,2.63560834872127,0,0,0,0,0.132409180813219,0,0,0,1.06748995729705,0,0.311211035399766,0.404132016209064,0.326923806226917,0,0,0,0,0,0,0.23486899728753,0,0.140450806702248,0.204154171254893,0.122834317311768,0.103325781175765,1.18800285728205,0.247266929278557,0,0,0.168336113954066,0.250237039743928,0,0,0,0,0,0.179389635688862,0,0,0,0,0.257640540045629,0,0.506328996723799,0,0.252433774244115,0,0,0.710019185033229,0.10075209822764,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.590789906681404,0,0.614942192715568,0,0,0,0.100528972411631,0.0925884451585296,0,0,0,0,0,0.144366447761074,0,0,0,0,0.246217006087397,0.234004265139238,0,0,0.16798212819886,0,0,0,0,0,0.44024217006613,0.414656231081544,0.144119953416961,0,0,0,0,0,0,0,0,0,0.43596006883328,0,0,0,0,0.26593811658487,0,0,0,0,0,0,0,0,0,0,0,0,0.099972991182057,0,0,0,0,0,0,0.434343920002738,0,0.179060963239896,0.112085143993527,1.18218456121156,1.07813787429759,0.77005821767849,0,0,0.773288812777695,0.167516265334349,0,3.74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13,0.325613074443898,0.320182037633146,0,0,0,0.611207220914332,0.813792356631477,0.665756774185513,0.402547587182052,0.320568492303233|short_description=p@chr11:85759876..85759880,-}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=N | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr11:85759876..85759880,- | |||
|id=chr11:85759876..85759880,- | |||
|ontology_enrichment_celltype=CL:0000766!1.90e-12!76;CL:0002057!8.35e-12!42;CL:0000738!8.41e-12!140;CL:0000860!1.47e-11!45;CL:0000037!1.17e-10!172;CL:0000566!1.17e-10!172;CL:0002032!1.70e-10!165;CL:0000837!1.70e-10!165;CL:0002087!1.81e-10!119;CL:0000839!6.23e-10!70;CL:0000763!9.01e-10!112;CL:0000049!9.01e-10!112;CL:0002194!1.72e-09!63;CL:0000576!1.72e-09!63;CL:0000040!1.72e-09!63;CL:0000559!1.72e-09!63;CL:0000988!2.62e-09!182;CL:0002031!3.54e-09!124;CL:0002009!9.71e-09!65;CL:0000557!2.32e-08!71 | |||
|ontology_enrichment_celltype_v019=CL:0000775;1.27e-15;3!CL:0000094;2.75e-15;8!CL:0000081;4.87e-11;11!CL:0002393;9.51e-08;6!CL:0002397;9.51e-08;6!CL:0000226;1.97e-07;3!CL:0000842;1.97e-07;3!CL:0000623;3.69e-07;3!CL:0000766;5.34e-07;69 | |||
|ontology_enrichment_celltype_v019_2=CL:0000766,4.22e-17,72;CL:0000775,7.56e-16,3;CL:0000094,1.18e-15,8;CL:0000738,4.96e-13,136;CL:0000763,1.83e-11,108;CL:0000049,1.83e-11,108;CL:0000860,2.41e-11,42;CL:0002057,2.41e-11,42;CL:0000081,2.66e-11,11;CL:0000037,1.11e-10,168;CL:0002194,1.71e-10,59;CL:0000576,1.71e-10,59;CL:0000040,1.71e-10,59;CL:0000559,1.71e-10,59;CL:0002009,4.55e-10,61;CL:0000988,7.13e-10,177;CL:0000473,1.17e-09,48;CL:0000234,1.17e-09,48;CL:0002032,4.01e-09,161;CL:0000837,4.01e-09,161;CL:0000839,4.05e-09,66;CL:0002087,5.50e-09,115;CL:0000557,6.03e-09,67;CL:0002393,1.08e-08,9;CL:0002397,1.08e-08,9;CL:0000226,2.11e-07,3;CL:0000842,2.11e-07,3;CL:0000623,6.47e-07,3;CL:0000825,6.47e-07,3 | |||
|ontology_enrichment_development_v019=CL:0002057;1.42e-09;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!4.61e-12!115;UBERON:0002390!1.39e-08!102;UBERON:0003061!1.39e-08!102;UBERON:0002193!8.36e-08!112 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;1.05e-07;15!UBERON:0000179;1.05e-07;15!UBERON:0000463;1.05e-07;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,3.16e-11,98;UBERON:0003061,3.16e-11,98;UBERON:0002193,7.78e-10,108;UBERON:0002371,1.35e-07,76;UBERON:0000178,1.37e-07,15;UBERON:0000179,1.37e-07,15;UBERON:0000463,1.37e-07,15;UBERON:0001474,7.30e-07,82 | |||
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| |||
|short_description=p@chr11:85759876..85759880,- | |||
}} |
Revision as of 20:02, 10 September 2013
Short description: | p@chr11:85759876..85759880, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr11:85759876..85759880, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
myeloid leukocyte | 4.22e-17 | 72 |
neutrophil | 7.56e-16 | 3 |
granulocyte | 1.18e-15 | 8 |
leukocyte | 4.96e-13 | 136 |
myeloid cell | 1.83e-11 | 108 |
common myeloid progenitor | 1.83e-11 | 108 |
classical monocyte | 2.41e-11 | 42 |
CD14-positive, CD16-negative classical monocyte | 2.41e-11 | 42 |
blood cell | 2.66e-11 | 11 |
hematopoietic stem cell | 1.11e-10 | 168 |
monopoietic cell | 1.71e-10 | 59 |
monocyte | 1.71e-10 | 59 |
monoblast | 1.71e-10 | 59 |
promonocyte | 1.71e-10 | 59 |
macrophage dendritic cell progenitor | 4.55e-10 | 61 |
hematopoietic cell | 7.13e-10 | 177 |
defensive cell | 1.17e-09 | 48 |
phagocyte | 1.17e-09 | 48 |
hematopoietic oligopotent progenitor cell | 4.01e-09 | 161 |
hematopoietic multipotent progenitor cell | 4.01e-09 | 161 |
myeloid lineage restricted progenitor cell | 4.05e-09 | 66 |
nongranular leukocyte | 5.50e-09 | 115 |
granulocyte monocyte progenitor cell | 6.03e-09 | 67 |
intermediate monocyte | 1.08e-08 | 9 |
CD14-positive, CD16-positive monocyte | 1.08e-08 | 9 |
single nucleate cell | 2.11e-07 | 3 |
mononuclear cell | 2.11e-07 | 3 |
natural killer cell | 6.47e-07 | 3 |
pro-NK cell | 6.47e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 3.16e-11 | 98 |
blood island | 3.16e-11 | 98 |
hemolymphoid system | 7.78e-10 | 108 |
bone marrow | 1.35e-07 | 76 |
blood | 1.37e-07 | 15 |
haemolymphatic fluid | 1.37e-07 | 15 |
organism substance | 1.37e-07 | 15 |
bone element | 7.30e-07 | 82 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.