FFCP PHASE1:Hg19::chr12:10562135..10562149,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=|TSSclassifier=S|UniProt=|association_with_transcript=0bp_to_ENST00000539300,ENST00000539370_5end|coexpression_cluster_id=C98|description=CAGE_peak_1_at_ENST00000539300_5end,CAGE_peak_1_at_ENST00000539370_5end|id=chr12:10562135..10562149,-|ontology_enrichment_celltype=CL:0000625!2.35e-28!11;CL:0000791!4.07e-19!18;CL:0000789!4.07e-19!18;CL:0002420!4.07e-19!18;CL:0002419!4.07e-19!18;CL:0000790!4.07e-19!18;CL:0000738!2.54e-16!140;CL:0002087!8.47e-15!119;CL:0000542!6.79e-13!53;CL:0000051!6.79e-13!53;CL:0000084!7.20e-13!25;CL:0000827!7.20e-13!25;CL:0000037!3.29e-12!172;CL:0000566!3.29e-12!172;CL:0002031!9.86e-12!124;CL:0000838!1.01e-11!52;CL:0000988!5.56e-11!182;CL:0002032!1.92e-10!165;CL:0000837!1.92e-10!165;CL:0000623!7.98e-09!3;CL:0000825!7.98e-09!3;CL:0000842!1.29e-08!3;CL:0002619!1.82e-07!3;CL:0002150!3.21e-07!3;CL:0000861!3.21e-07!3|ontology_enrichment_celltype_v019=CL:0000625;4.80e-70;11!CL:0000791;3.17e-42;18!CL:0000789;3.17e-42;18!CL:0002419;3.17e-42;18!CL:0000084;5.74e-30;25!CL:0000623;1.08e-23;3!CL:0000542;3.78e-17;53!CL:0000226;3.79e-11;3!CL:0000842;3.79e-11;3!CL:0000785;5.53e-09;1!CL:0000819;5.53e-09;1|ontology_enrichment_celltype_v019_2=CL:0000625,4.32e-70,11;CL:0000791,2.97e-42,18;CL:0000789,2.97e-42,18;CL:0002420,2.97e-42,18;CL:0002419,2.97e-42,18;CL:0000790,2.97e-42,18;CL:0000838,5.83e-31,52;CL:0000542,2.52e-30,53;CL:0000051,2.52e-30,53;CL:0000084,5.49e-30,25;CL:0000827,5.49e-30,25;CL:0000623,9.24e-24,3;CL:0000825,9.24e-24,3;CL:0000738,4.14e-19,136;CL:0002087,2.20e-18,115;CL:0002031,1.97e-15,120;CL:0000037,8.30e-15,168;CL:0000988,7.10e-14,177;CL:0002032,2.96e-12,161;CL:0000837,2.96e-12,161;CL:0000226,3.60e-11,3;CL:0000842,3.60e-11,3;CL:0000819,6.72e-09,1|ontology_enrichment_development_v019=CL:0000790;3.17e-42;18!CL:0000051;3.78e-17;53|ontology_enrichment_disease=|ontology_enrichment_disease_v019=DOID:0060073;5.53e-09;1!DOID:8675;5.53e-09;1|ontology_enrichment_disease_v019_2=DOID:0060073,6.72e-09,1;DOID:8675,6.72e-09,1|ontology_enrichment_uberon=UBERON:0000178!5.24e-10!15;UBERON:0000179!5.24e-10!15;UBERON:0000463!5.24e-10!15;UBERON:0007023!5.46e-10!115;UBERON:0002390!6.88e-09!102;UBERON:0003061!6.88e-09!102;UBERON:0002193!2.31e-08!112|ontology_enrichment_uberon_v019=UBERON:0000178;5.79e-24;15!UBERON:0000179;5.79e-24;15!UBERON:0000463;5.79e-24;15!UBERON:0002390;2.02e-10;32|ontology_enrichment_uberon_v019_2=UBERON:0000178,5.90e-24,15;UBERON:0000179,5.90e-24,15;UBERON:0000463,5.90e-24,15|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0.123766352960047,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0787107813136792,0,4.60595277716655,0.154816123316076,0,0,0,1.39440961044543,0,0,0,0.601633342410425,0.651032612147555,0.223915474239924,0.32389366601898,0.257575567634187,0,0,0,0,0,0,0.28769239232215,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.217188844705117,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.32592226663359,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.5569624297229,9.76625180784628,21.8603970223126,1.35517607169996,2.8157054453972,16.240994451805,12.5491943583329,18.064815932263,0.80642697289893,8.82552646085574,8.11016661743674,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.118306800039844,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0925884451585296,0,0,0,0,0,0,0,0,0,0,0.246217006087397,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.50677127429638,0,0,0,0,0,0,0,0,4.53170748464433,4.52817907204986,1.79680250791648,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.48121631347465,0.862856803274467,2.77491650288955,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120859449591622,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0852266274161009,0,0,0,0,0,0,0,0,0,0,0,0,0,0.372158369359667,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.52234282769651,0,1.13929437434833,2.62054953003568,3.70226045777575,0,0,2.37937552888281,0,0,0,0.743212700502875,0,0,0,0,0,0,0,0,0.228234679033192,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0,0,0,0,0,0,0,0,0,0,0,0.276283915531148,0,0,0,0,0,0,0,0.0986434056369336,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.110579259931225,0,0,0,0,0.615602068030377,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.353830258013357,0,0,0,0,0,0,0,2.18945747058799,0,0,0,0,0,0.379119477770928,0,0,0,0,0,1.19472429772959,0,0,0,0,0,0,0,0.19351266257817,0.365446585430928,0.0821154570532092,0,0.0882561266915003,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.458320848023367,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.899895566206002,3.0952078182318,0,0,0.394028536495991,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146552233678082,0,0,0.13223260174269,0,0,0.427149650270779,0,0,0,0,0,0,0,0,0.306345576763462,0,0,0,0,0,0,0.110929051536852,0.0620964029413835,0,0,0,0,0,0,0,0,0,0,0,0,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| ||
|DPIdataset=robustDPI | |||
|EntrezGene= | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC= | |||
|TSSclassifier=S | |||
|UniProt= | |||
|association_with_transcript=0bp_to_ENST00000539300,ENST00000539370_5end | |||
|coexpression_cluster_id=C98 | |||
|description=CAGE_peak_1_at_ENST00000539300_5end,CAGE_peak_1_at_ENST00000539370_5end | |||
|id=chr12:10562135..10562149,- | |||
|ontology_enrichment_celltype=CL:0000625!2.35e-28!11;CL:0000791!4.07e-19!18;CL:0000789!4.07e-19!18;CL:0002420!4.07e-19!18;CL:0002419!4.07e-19!18;CL:0000790!4.07e-19!18;CL:0000738!2.54e-16!140;CL:0002087!8.47e-15!119;CL:0000542!6.79e-13!53;CL:0000051!6.79e-13!53;CL:0000084!7.20e-13!25;CL:0000827!7.20e-13!25;CL:0000037!3.29e-12!172;CL:0000566!3.29e-12!172;CL:0002031!9.86e-12!124;CL:0000838!1.01e-11!52;CL:0000988!5.56e-11!182;CL:0002032!1.92e-10!165;CL:0000837!1.92e-10!165;CL:0000623!7.98e-09!3;CL:0000825!7.98e-09!3;CL:0000842!1.29e-08!3;CL:0002619!1.82e-07!3;CL:0002150!3.21e-07!3;CL:0000861!3.21e-07!3 | |||
|ontology_enrichment_celltype_v019=CL:0000625;4.80e-70;11!CL:0000791;3.17e-42;18!CL:0000789;3.17e-42;18!CL:0002419;3.17e-42;18!CL:0000084;5.74e-30;25!CL:0000623;1.08e-23;3!CL:0000542;3.78e-17;53!CL:0000226;3.79e-11;3!CL:0000842;3.79e-11;3!CL:0000785;5.53e-09;1!CL:0000819;5.53e-09;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000625,4.32e-70,11;CL:0000791,2.97e-42,18;CL:0000789,2.97e-42,18;CL:0002420,2.97e-42,18;CL:0002419,2.97e-42,18;CL:0000790,2.97e-42,18;CL:0000838,5.83e-31,52;CL:0000542,2.52e-30,53;CL:0000051,2.52e-30,53;CL:0000084,5.49e-30,25;CL:0000827,5.49e-30,25;CL:0000623,9.24e-24,3;CL:0000825,9.24e-24,3;CL:0000738,4.14e-19,136;CL:0002087,2.20e-18,115;CL:0002031,1.97e-15,120;CL:0000037,8.30e-15,168;CL:0000988,7.10e-14,177;CL:0002032,2.96e-12,161;CL:0000837,2.96e-12,161;CL:0000226,3.60e-11,3;CL:0000842,3.60e-11,3;CL:0000819,6.72e-09,1 | |||
|ontology_enrichment_development_v019=CL:0000790;3.17e-42;18!CL:0000051;3.78e-17;53 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:0060073;5.53e-09;1!DOID:8675;5.53e-09;1 | |||
|ontology_enrichment_disease_v019_2=DOID:0060073,6.72e-09,1;DOID:8675,6.72e-09,1 | |||
|ontology_enrichment_uberon=UBERON:0000178!5.24e-10!15;UBERON:0000179!5.24e-10!15;UBERON:0000463!5.24e-10!15;UBERON:0007023!5.46e-10!115;UBERON:0002390!6.88e-09!102;UBERON:0003061!6.88e-09!102;UBERON:0002193!2.31e-08!112 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;5.79e-24;15!UBERON:0000179;5.79e-24;15!UBERON:0000463;5.79e-24;15!UBERON:0002390;2.02e-10;32 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,5.90e-24,15;UBERON:0000179,5.90e-24,15;UBERON:0000463,5.90e-24,15 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0.123766352960047,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0787107813136792,0,4.60595277716655,0.154816123316076,0,0,0,1.39440961044543,0,0,0,0.601633342410425,0.651032612147555,0.223915474239924,0.32389366601898,0.257575567634187,0,0,0,0,0,0,0.28769239232215,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.217188844705117,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.32592226663359,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.5569624297229,9.76625180784628,21.8603970223126,1.35517607169996,2.8157054453972,16.240994451805,12.5491943583329,18.064815932263,0.80642697289893,8.82552646085574,8.11016661743674,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.118306800039844,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0925884451585296,0,0,0,0,0,0,0,0,0,0,0.246217006087397,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.50677127429638,0,0,0,0,0,0,0,0,4.53170748464433,4.52817907204986,1.79680250791648,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.48121631347465,0.862856803274467,2.77491650288955,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120859449591622,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0852266274161009,0,0,0,0,0,0,0,0,0,0,0,0,0,0.372158369359667,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.52234282769651,0,1.13929437434833,2.62054953003568,3.70226045777575,0,0,2.37937552888281,0,0,0,0.743212700502875,0,0,0,0,0,0,0,0,0.228234679033192,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0,0,0,0,0,0,0,0,0,0,0,0.276283915531148,0,0,0,0,0,0,0,0.0986434056369336,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.110579259931225,0,0,0,0,0.615602068030377,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.353830258013357,0,0,0,0,0,0,0,2.18945747058799,0,0,0,0,0,0.379119477770928,0,0,0,0,0,1.19472429772959,0,0,0,0,0,0,0,0.19351266257817,0.365446585430928,0.0821154570532092,0,0.0882561266915003,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.458320848023367,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.899895566206002,3.0952078182318,0,0,0.394028536495991,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146552233678082,0,0,0.13223260174269,0,0,0.427149650270779,0,0,0,0,0,0,0,0,0.306345576763462,0,0,0,0,0,0,0.110929051536852,0.0620964029413835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132864840313363,0,0,0,0,0,0.106691729694141,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.80057074828547,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0887023701626388,0,0.514464028312255,0,0,0,0,0.078493092850514,0,0,0,0,0,0.142953088353313,0,0,0,0,0,0,0,0,0,0,0.423387050190929,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.617393264863557,0,0,0,0.235676547101626,0,0,0.4226557275834,0,0.469919589899268,0.322289439867886,0,0,0,0,0,0,0,0,0,0,0.5290268405154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.639701945702943,0,0.0645889098360061,0.372448285775147,0,0,0,0,0,0.471464371102113,0.0717222053926763,0,0,0,0,0,0,0,0,0,0.201273793591026,0 | |||
|short_description=p1@ENST00000539300,p1@ENST00000539370 | |||
}} |
Revision as of 20:35, 10 September 2013
Short description: | p1@ENST00000539300, p1@ENST00000539370 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_ENST00000539300_5end, CAGE_peak_1_at_ENST00000539370_5end |
Coexpression cluster: | C98_CD8_Natural_Basophils_blood_CD4_Peripheral_Whole |
Association with transcript: | 0bp_to_ENST00000539300, ENST00000539370_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
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Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CD8-positive, alpha-beta T cell | 4.32e-70 | 11 |
mature alpha-beta T cell | 2.97e-42 | 18 |
alpha-beta T cell | 2.97e-42 | 18 |
immature T cell | 2.97e-42 | 18 |
mature T cell | 2.97e-42 | 18 |
immature alpha-beta T cell | 2.97e-42 | 18 |
lymphoid lineage restricted progenitor cell | 5.83e-31 | 52 |
lymphocyte | 2.52e-30 | 53 |
common lymphoid progenitor | 2.52e-30 | 53 |
T cell | 5.49e-30 | 25 |
pro-T cell | 5.49e-30 | 25 |
natural killer cell | 9.24e-24 | 3 |
pro-NK cell | 9.24e-24 | 3 |
leukocyte | 4.14e-19 | 136 |
nongranular leukocyte | 2.20e-18 | 115 |
hematopoietic lineage restricted progenitor cell | 1.97e-15 | 120 |
hematopoietic stem cell | 8.30e-15 | 168 |
hematopoietic cell | 7.10e-14 | 177 |
hematopoietic oligopotent progenitor cell | 2.96e-12 | 161 |
hematopoietic multipotent progenitor cell | 2.96e-12 | 161 |
single nucleate cell | 3.60e-11 | 3 |
mononuclear cell | 3.60e-11 | 3 |
B-1 B cell | 6.72e-09 | 1 |
Ontology term | p-value | n |
---|---|---|
blood | 5.90e-24 | 15 |
haemolymphatic fluid | 5.90e-24 | 15 |
organism substance | 5.90e-24 | 15 |
Ontology term | p-value | n |
---|---|---|
lymphatic system cancer | 6.72e-09 | 1 |
lymphosarcoma | 6.72e-09 | 1 |
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