FFCP PHASE1:Hg19::chr13:72441289..72441300,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=1602|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=2663|TSSclassifier=S|UniProt=D0FY35,D0FY36,A6NJF5,Q9UI36|association_with_transcript=29bp_to_ENST00000305425,ENST00000313174,ENST00000354591,ENST00000377826,NM_004392,NM_080759,NM_080760,uc010thn.1,uc010tho.1,uc010thp.1_5end|coexpression_cluster_id=C2269|description=CAGE_peak_13_at_DACH1_5end|id=chr13:72441289..72441300,-|ontology_enrichment_celltype=CL:0000064!3.39e-07!3;CL:0005012!3.39e-07!3;CL:0000067!3.39e-07!3;CL:0002304!3.39e-07!3;CL:0002319!6.07e-07!25;CL:0002605!9.10e-07!3|ontology_enrichment_celltype_v019=CL:0000123;8.51e-20;2!CL:0000242;8.51e-20;2!CL:0000312;1.82e-08;5!CL:0000095;6.08e-08;17!CL:0000240;3.44e-07;6!CL:0000311;3.44e-07;6!CL:0000079;3.44e-07;6!CL:0000237;3.44e-07;6|ontology_enrichment_celltype_v019_2=CL:0000242,8.54e-20,2;CL:0000312,1.83e-08,5;CL:0000095,5.25e-08,17;CL:0000123,5.25e-08,17;CL:0000240,3.44e-07,6;CL:0000311,3.44e-07,6;CL:0000079,3.44e-07,6;CL:0000237,3.44e-07,6;CL:0000036,3.44e-07,6;CL:0000357,3.44e-07,6;CL:0000114,3.44e-07,6|ontology_enrichment_development_v019=CL:0000357;3.44e-07;6!CL:0000114;3.44e-07;6|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0003075!8.03e-13!86;UBERON:0007284!8.03e-13!86;UBERON:0002346!6.80e-12!90;UBERON:0005743!2.67e-11!86;UBERON:0000073!1.66e-10!94;UBERON:0001016!1.66e-10!94;UBERON:0001017!3.22e-10!82;UBERON:0003056!1.02e-09!61;UBERON:0000955!3.93e-09!69;UBERON:0006238!3.93e-09!69;UBERON:0007023!4.32e-09!115;UBERON:0001049!5.97e-09!57;UBERON:0005068!5.97e-09!57;UBERON:0006241!5.97e-09!57;UBERON:0007135!5.97e-09!57;UBERON:0002616!1.76e-08!59;UBERON:0004121!4.86e-08!169;UBERON:0000153!9.79e-08!129;UBERON:0007811!9.79e-08!129;UBERON:0000924!1.22e-07!173;UBERON:0006601!1.22e-07!173;UBERON:0000033!3.06e-07!123;UBERON:0001778!3.39e-07!3;UBERON:0001775!3.39e-07!3;UBERON:0002780!5.94e-07!41;UBERON:0001890!5.94e-07!41;UBERON:0006240!5.94e-07!41|ontology_enrichment_uberon_v019=UBERON:0001905;6.51e-19;2!UBERON:0002757;6.51e-19;2!UBERON:0010134;6.51e-19;2!UBERON:0005408;6.51e-19;2!UBERON:0001899;6.51e-19;2!UBERON:0003296;6.24e-10;4!UBERON:0010133;6.24e-10;4!UBERON:0002784;6.24e-10;4|ontology_enrichment_uberon_v019_2=UBERON:0001905,1.97e-19,2;UBERON:0002757,1.97e-19,2;UBERON:0010134,1.97e-19,2;UBERON:0005408,1.97e-19,2;UBERON:0001899,1.97e-19,2;UBERON:0003296,3.46e-10,4;UBERON:0010133,3.46e-10,4;UBERON:0002784,3.46e-10,4|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123121058076788,0,0,0.572471974262113,0.547497700291537,0.251085279189606,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.329851300186716,0,0,0,0,0,0.251248665256743,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.756278537312543,0.665188192387692,0.702678285545008,0.130979075497713,0,0,0,0,0,0.238490624305342,0,0,0,0,0.347140501607594,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183201743930407,0,0,0,0,0,0,0,0,0,0,0,0.311211035399766,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.348581828608555,0.518305275076852,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.34779121492523,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.46331618947972,0.088048434013226,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.254094624222463,0,0,0.167516265334349,0.637938751653163,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.160853921143607,0,0,0,0,0,0,0,0,0,0,0,0.131124414959424,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.261435451024901,0,0,0.325378394664303,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.98092366383228,0.343505344755765,1.53620382154229,0.447352215784832,0.500547425135725,0,0.278406173895242,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.80025734630388,0,0,1.0077309914171,0,0,0,0,0,0,0,0,0,0,0.0927680981618513,0,0.520855522170466,0.437299999980979,0,0,0,0,0.689486746482929,0,0.694499979733169,0,0,0,0,0.295547618953547,0.219385397153973,0,0,0,0,0,0,0,0,0,0,0,0,0.166211681900156,0,0,0,0,0.158936578980379,0,0,0,1.08194319871046,0,0,0,0,0,0,0,0.802577647298789,0.234264445725339,0,0,0,0,1.20990716048664,0.30607276163049,0,0.150323419414493,0.207376382794494,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0969890164884194,0,0,0,0,0.0633107959558787,0,0,0,0,0,0.916292769327325,1.20116498503375,0,0,0,0,0,0,0,0,0,0,0,0,0,0.229160424011684,0.717873024576814,0,0,0,0.0671834724867263,0,1.16495949527454,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157611414598396,0.577000469484979,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146552233678082,0,0.258565912723101,0,0,0,0.213574825135389,1.25763444079733,0.414239055347196,0,0,0,0,0,0,0.306345576763462,0,0.314108192500469,0,0,0,0,0.11092905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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=1602 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=2663 | |||
|TSSclassifier=S | |||
|UniProt=D0FY35,D0FY36,A6NJF5,Q9UI36 | |||
|association_with_transcript=29bp_to_ENST00000305425,ENST00000313174,ENST00000354591,ENST00000377826,NM_004392,NM_080759,NM_080760,uc010thn.1,uc010tho.1,uc010thp.1_5end | |||
|coexpression_cluster_id=C2269 | |||
|description=CAGE_peak_13_at_DACH1_5end | |||
|id=chr13:72441289..72441300,- | |||
|ontology_enrichment_celltype=CL:0000064!3.39e-07!3;CL:0005012!3.39e-07!3;CL:0000067!3.39e-07!3;CL:0002304!3.39e-07!3;CL:0002319!6.07e-07!25;CL:0002605!9.10e-07!3 | |||
|ontology_enrichment_celltype_v019=CL:0000123;8.51e-20;2!CL:0000242;8.51e-20;2!CL:0000312;1.82e-08;5!CL:0000095;6.08e-08;17!CL:0000240;3.44e-07;6!CL:0000311;3.44e-07;6!CL:0000079;3.44e-07;6!CL:0000237;3.44e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000242,8.54e-20,2;CL:0000312,1.83e-08,5;CL:0000095,5.25e-08,17;CL:0000123,5.25e-08,17;CL:0000240,3.44e-07,6;CL:0000311,3.44e-07,6;CL:0000079,3.44e-07,6;CL:0000237,3.44e-07,6;CL:0000036,3.44e-07,6;CL:0000357,3.44e-07,6;CL:0000114,3.44e-07,6 | |||
|ontology_enrichment_development_v019=CL:0000357;3.44e-07;6!CL:0000114;3.44e-07;6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003075!8.03e-13!86;UBERON:0007284!8.03e-13!86;UBERON:0002346!6.80e-12!90;UBERON:0005743!2.67e-11!86;UBERON:0000073!1.66e-10!94;UBERON:0001016!1.66e-10!94;UBERON:0001017!3.22e-10!82;UBERON:0003056!1.02e-09!61;UBERON:0000955!3.93e-09!69;UBERON:0006238!3.93e-09!69;UBERON:0007023!4.32e-09!115;UBERON:0001049!5.97e-09!57;UBERON:0005068!5.97e-09!57;UBERON:0006241!5.97e-09!57;UBERON:0007135!5.97e-09!57;UBERON:0002616!1.76e-08!59;UBERON:0004121!4.86e-08!169;UBERON:0000153!9.79e-08!129;UBERON:0007811!9.79e-08!129;UBERON:0000924!1.22e-07!173;UBERON:0006601!1.22e-07!173;UBERON:0000033!3.06e-07!123;UBERON:0001778!3.39e-07!3;UBERON:0001775!3.39e-07!3;UBERON:0002780!5.94e-07!41;UBERON:0001890!5.94e-07!41;UBERON:0006240!5.94e-07!41 | |||
|ontology_enrichment_uberon_v019=UBERON:0001905;6.51e-19;2!UBERON:0002757;6.51e-19;2!UBERON:0010134;6.51e-19;2!UBERON:0005408;6.51e-19;2!UBERON:0001899;6.51e-19;2!UBERON:0003296;6.24e-10;4!UBERON:0010133;6.24e-10;4!UBERON:0002784;6.24e-10;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001905,1.97e-19,2;UBERON:0002757,1.97e-19,2;UBERON:0010134,1.97e-19,2;UBERON:0005408,1.97e-19,2;UBERON:0001899,1.97e-19,2;UBERON:0003296,3.46e-10,4;UBERON:0010133,3.46e-10,4;UBERON:0002784,3.46e-10,4 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123121058076788,0,0,0.572471974262113,0.547497700291537,0.251085279189606,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.329851300186716,0,0,0,0,0,0.251248665256743,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.756278537312543,0.665188192387692,0.702678285545008,0.130979075497713,0,0,0,0,0,0.238490624305342,0,0,0,0,0.347140501607594,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183201743930407,0,0,0,0,0,0,0,0,0,0,0,0.311211035399766,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.348581828608555,0.518305275076852,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.34779121492523,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.46331618947972,0.088048434013226,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.254094624222463,0,0,0.167516265334349,0.637938751653163,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.160853921143607,0,0,0,0,0,0,0,0,0,0,0,0.131124414959424,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.261435451024901,0,0,0.325378394664303,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.98092366383228,0.343505344755765,1.53620382154229,0.447352215784832,0.500547425135725,0,0.278406173895242,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.80025734630388,0,0,1.0077309914171,0,0,0,0,0,0,0,0,0,0,0.0927680981618513,0,0.520855522170466,0.437299999980979,0,0,0,0,0.689486746482929,0,0.694499979733169,0,0,0,0,0.295547618953547,0.219385397153973,0,0,0,0,0,0,0,0,0,0,0,0,0.166211681900156,0,0,0,0,0.158936578980379,0,0,0,1.08194319871046,0,0,0,0,0,0,0,0.802577647298789,0.234264445725339,0,0,0,0,1.20990716048664,0.30607276163049,0,0.150323419414493,0.207376382794494,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0969890164884194,0,0,0,0,0.0633107959558787,0,0,0,0,0,0.916292769327325,1.20116498503375,0,0,0,0,0,0,0,0,0,0,0,0,0,0.229160424011684,0.717873024576814,0,0,0,0.0671834724867263,0,1.16495949527454,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157611414598396,0.577000469484979,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146552233678082,0,0.258565912723101,0,0,0,0.213574825135389,1.25763444079733,0.414239055347196,0,0,0,0,0,0,0.306345576763462,0,0.314108192500469,0,0,0,0,0.110929051536852,0.0620964029413835,1.52183498429854,0,0,0,0,3.74667924645505,2.8984205722165,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.15104934173287,0,0,0,0,0,0,0,0,0,0,0,0,0.128458450192919,1.41696576325585,0,0,0,0.0691572524642179,0,0,0,0,0,0,0,0,0,0.0752103283492573,0,0,0,0,0,0,0,0,0,2.7348740450911,0,0,0,0,1.60710550763486,1.68141861109412,0,0.227662191351298,0.177404740325278,0,0,0.135939465953663,0,0,0,0.235479278551542,0.157115589916002,0,0,0,0,0.214429632529969,1.58013611732727,0.929931402945002,0.173858272302579,0,0,0,0,0,0,0,0.846774100381858,0,0,0,0,0,0,0,0.102662806856247,0,0,0,8.35593255677747,0.118920090777569,0,0.549702583727146,0,0.154348316215889,1.09279780251979,0,0,0,0,0,0,0,0.281951753939561,0.386747327841463,0,0,0,0,0,0,0,1.41994405973866,0,0.436350690340377,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0645889098360061,0.124149428591716,0,0,0,0,0.342233301085281,0,0,0,0,0,0,0,0,0.244482888365733,0.406896178315738,0,0,0 | |||
|short_description=p13@DACH1 | |||
}} |
Revision as of 02:43, 11 September 2013
Short description: | p13@DACH1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_13_at_DACH1_5end |
Coexpression cluster: | C2269_merkel_small_Mast_anaplastic_acute_colon_pineal |
Association with transcript: | 29bp_to_ENST00000305425, ENST00000313174, ENST00000354591, ENST00000377826, NM_004392, NM_080759, NM_080760, uc010thn.1, uc010tho.1, uc010thp.1_5end |
EntrezGene: | DACH1 |
HGNC: | 2663 |
UniProt: | D0FY35D0FY36A6NJF5Q9UI36 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
Merkel cell | 8.54e-20 | 2 |
keratinocyte | 1.83e-08 | 5 |
neuron associated cell | 5.25e-08 | 17 |
neuron associated cell (sensu Vertebrata) | 5.25e-08 | 17 |
stratified squamous epithelial cell | 3.44e-07 | 6 |
keratin accumulating cell | 3.44e-07 | 6 |
stratified epithelial cell | 3.44e-07 | 6 |
keratinizing barrier epithelial cell | 3.44e-07 | 6 |
epithelial fate stem cell | 3.44e-07 | 6 |
stratified epithelial stem cell | 3.44e-07 | 6 |
surface ectodermal cell | 3.44e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
pineal body | 1.97e-19 | 2 |
regional part of epithalamus | 1.97e-19 | 2 |
secretory circumventricular organ | 1.97e-19 | 2 |
circumventricular organ | 1.97e-19 | 2 |
epithalamus | 1.97e-19 | 2 |
gland of diencephalon | 3.46e-10 | 4 |
neuroendocrine gland | 3.46e-10 | 4 |
regional part of diencephalon | 3.46e-10 | 4 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.