FFCP PHASE1:Hg19::chr14:59830398..59830424,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=N|UniProt=NA|association_with_transcript=NA|coexpression_cluster_id=C2304|description=CAGE_peak_at_chr14:59830398..59830424,+|id=chr14:59830398..59830424,+|ontology_enrichment_celltype=CL:0000066!1.61e-22!254;CL:0000076!2.83e-20!62;CL:0002321!2.26e-16!248;CL:0000220!2.50e-16!246;CL:0000222!2.71e-11!119;CL:0002076!6.04e-09!43;CL:0000223!4.05e-07!59;CL:0000213!5.14e-07!57;CL:0000215!5.14e-07!57;CL:0000071!5.37e-07!18;CL:0002546!5.37e-07!18;CL:0002139!5.67e-07!24|ontology_enrichment_celltype_v019=CL:0000076;3.11e-12;63!CL:0002076;6.25e-10;42!CL:0002494;1.27e-09;16!CL:0002368;2.68e-09;13!CL:0000077;3.66e-08;19!CL:0000071;1.50e-07;18|ontology_enrichment_celltype_v019_2=CL:0000076,1.89e-25,63;CL:0000066,7.81e-24,253;CL:0002321,9.95e-16,250;CL:0002076,2.75e-12,42;CL:0000223,9.90e-10,58;CL:0002494,2.15e-09,16;CL:0002368,2.62e-09,13;CL:0000077,2.89e-08,19;CL:0000222,6.10e-08,121;CL:0000071,1.24e-07,18;CL:0002546,1.24e-07,18|ontology_enrichment_development_v019=CL:0002546;1.50e-07;18|ontology_enrichment_disease=DOID:1749!1.76e-07!14|ontology_enrichment_disease_v019=DOID:1749;7.24e-10;14!DOID:2394;1.13e-07;14|ontology_enrichment_disease_v019_2=DOID:1749,9.09e-10,14;DOID:2394,8.01e-08,14|ontology_enrichment_uberon=UBERON:0004872!3.13e-16!84;UBERON:0001981!1.22e-12!60;UBERON:0007500!1.22e-12!60;UBERON:0004537!1.22e-12!60;UBERON:0006965!1.22e-12!60;UBERON:0002049!2.26e-12!79;UBERON:0007798!2.26e-12!79;UBERON:0000490!1.92e-11!138;UBERON:0000055!2.23e-11!69;UBERON:0001009!1.24e-10!113;UBERON:0003914!1.42e-10!118;UBERON:0004535!2.01e-10!110;UBERON:0001637!2.14e-10!42;UBERON:0003509!2.14e-10!42;UBERON:0004572!2.14e-10!42;UBERON:0001048!3.36e-10!168;UBERON:0000483!1.59e-09!309;UBERON:0000119!1.83e-09!312;UBERON:0004573!7.79e-09!33;UBERON:0004571!7.79e-09!33;UBERON:0000477!1.43e-08!286;UBERON:0000947!2.30e-08!21;UBERON:0010191!2.30e-08!21;UBERON:0000486!1.43e-07!82;UBERON:0000487!3.46e-07!22;UBERON:0004111!5.13e-07!241;UBERON:0001986!5.37e-07!18;UBERON:0004638!5.37e-07!18;UBERON:0004852!5.37e-07!18;UBERON:0007100!5.85e-07!27;UBERON:0000948!6.34e-07!24;UBERON:0005498!6.34e-07!24;UBERON:0004140!6.34e-07!24;UBERON:0009881!6.34e-07!24;UBERON:0004141!6.34e-07!24;UBERON:0003084!6.34e-07!24;UBERON:0007005!6.34e-07!24;UBERON:0004139!6.34e-07!24;UBERON:0004291!6.34e-07!24|ontology_enrichment_uberon_v019=UBERON:0000490;1.18e-08;33!UBERON:0000487;3.07e-08;22!UBERON:0000947;8.04e-08;21!UBERON:0010191;8.04e-08;21!UBERON:0007500;1.01e-07;56!UBERON:0001981;1.01e-07;56!UBERON:0004537;1.01e-07;56!UBERON:0000948;1.29e-07;22!UBERON:0004638;1.50e-07;18!UBERON:0001986;1.50e-07;18!UBERON:0004852;1.50e-07;18!UBERON:0001637;1.83e-07;42!UBERON:0003509;1.83e-07;42!UBERON:0004572;1.83e-07;42!UBERON:0004573;2.31e-07;33!UBERON:0004571;2.31e-07;33|ontology_enrichment_uberon_v019_2=UBERON:0004872,1.02e-15,83;UBERON:0003914,4.03e-11,117;UBERON:0007500,1.13e-10,59;UBERON:0001981,1.13e-10,59;UBERON:0004537,1.13e-10,59;UBERON:0006965,1.13e-10,59;UBERON:0001637,1.70e-09,42;UBERON:0003509,1.70e-09,42;UBERON:0004572,1.70e-09,42;UBERON:0001048,1.05e-08,160;UBERON:0000055,1.99e-08,68;UBERON:0000487,2.22e-08,22;UBERON:0004535,2.85e-08,109;UBERON:0004573,4.29e-08,33;UBERON:0004571,4.29e-08,33;UBERON:0000947,5.85e-08,21;UBERON:0010191,5.85e-08,21;UBERON:0000490,8.12e-08,148;UBERON:0001009,1.06e-07,112;UBERON:0004638,1.24e-07,18;UBERON:0001986,1.24e-07,18;UBERON:0004852,1.24e-07,18;UBERON:0000948,2.12e-07,24;UBERON:0005498,2.12e-07,24;UBERON:0004140,2.12e-07,24;UBERON:0009881,2.12e-07,24;UBERON:0004141,2.12e-07,24;UBERON:0003084,2.12e-07,24;UBERON:0007005,2.12e-07,24;UBERON:0004139,2.12e-07,24;UBERON:0004291,2.12e-07,24;UBERON:0002049,2.86e-07,78;UBERON:0007798,2.86e-07,78;UBERON:0006914,8.42e-07,25|phase1_expression=1.45342703416445,1.49870366723688,1.40954404095971,0,0.446961094427288,4.36169262050184,0,2.52687949370732,0,1.22866968250754,0,0.655324116390517,0,0,0,4.70627602516243,2.41077811209591,5.84248072309899,3.90346239032406,0,0,0,0,0,0,0.229240217243854,0.246301768349837,0,0,0,0.154816123316076,12.871897142705,3.31326510656075,2.58827807116751,0.232401601740905,0.142169232487422,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.224723484445085,0,0,0,0,0,0.426224750532694,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.587237189370939,0,0,0,0,0,0,0,0,0.32592226663359,0,0,0,0,0.221533894583621,0,0.128091319725675,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.34140171940727,6.52099065402005,0,0,0,0,0,0.283604451492204,0.665188192387692,0.527008714158756,0.458426764241994,2.91436230634034,1.85392221392215,0,0,0,0,0,0,4.77029777680092,4.30117297553062,6.94281003215189,14.1326985481002,0.419499436209906,2.20094433552054,1.67195973229448,0.258416759169329,0.35576626268671,0.33472061276467,2.01414658554573,3.80136052859256,0,3.67663080345869,0.81014194788176,1.51809538082936,2.2452937262617,0.675668882899933,3.0663327493176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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=N | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C2304 | |||
|description=CAGE_peak_at_chr14:59830398..59830424,+ | |||
|id=chr14:59830398..59830424,+ | |||
|ontology_enrichment_celltype=CL:0000066!1.61e-22!254;CL:0000076!2.83e-20!62;CL:0002321!2.26e-16!248;CL:0000220!2.50e-16!246;CL:0000222!2.71e-11!119;CL:0002076!6.04e-09!43;CL:0000223!4.05e-07!59;CL:0000213!5.14e-07!57;CL:0000215!5.14e-07!57;CL:0000071!5.37e-07!18;CL:0002546!5.37e-07!18;CL:0002139!5.67e-07!24 | |||
|ontology_enrichment_celltype_v019=CL:0000076;3.11e-12;63!CL:0002076;6.25e-10;42!CL:0002494;1.27e-09;16!CL:0002368;2.68e-09;13!CL:0000077;3.66e-08;19!CL:0000071;1.50e-07;18 | |||
|ontology_enrichment_celltype_v019_2=CL:0000076,1.89e-25,63;CL:0000066,7.81e-24,253;CL:0002321,9.95e-16,250;CL:0002076,2.75e-12,42;CL:0000223,9.90e-10,58;CL:0002494,2.15e-09,16;CL:0002368,2.62e-09,13;CL:0000077,2.89e-08,19;CL:0000222,6.10e-08,121;CL:0000071,1.24e-07,18;CL:0002546,1.24e-07,18 | |||
|ontology_enrichment_development_v019=CL:0002546;1.50e-07;18 | |||
|ontology_enrichment_disease=DOID:1749!1.76e-07!14 | |||
|ontology_enrichment_disease_v019=DOID:1749;7.24e-10;14!DOID:2394;1.13e-07;14 | |||
|ontology_enrichment_disease_v019_2=DOID:1749,9.09e-10,14;DOID:2394,8.01e-08,14 | |||
|ontology_enrichment_uberon=UBERON:0004872!3.13e-16!84;UBERON:0001981!1.22e-12!60;UBERON:0007500!1.22e-12!60;UBERON:0004537!1.22e-12!60;UBERON:0006965!1.22e-12!60;UBERON:0002049!2.26e-12!79;UBERON:0007798!2.26e-12!79;UBERON:0000490!1.92e-11!138;UBERON:0000055!2.23e-11!69;UBERON:0001009!1.24e-10!113;UBERON:0003914!1.42e-10!118;UBERON:0004535!2.01e-10!110;UBERON:0001637!2.14e-10!42;UBERON:0003509!2.14e-10!42;UBERON:0004572!2.14e-10!42;UBERON:0001048!3.36e-10!168;UBERON:0000483!1.59e-09!309;UBERON:0000119!1.83e-09!312;UBERON:0004573!7.79e-09!33;UBERON:0004571!7.79e-09!33;UBERON:0000477!1.43e-08!286;UBERON:0000947!2.30e-08!21;UBERON:0010191!2.30e-08!21;UBERON:0000486!1.43e-07!82;UBERON:0000487!3.46e-07!22;UBERON:0004111!5.13e-07!241;UBERON:0001986!5.37e-07!18;UBERON:0004638!5.37e-07!18;UBERON:0004852!5.37e-07!18;UBERON:0007100!5.85e-07!27;UBERON:0000948!6.34e-07!24;UBERON:0005498!6.34e-07!24;UBERON:0004140!6.34e-07!24;UBERON:0009881!6.34e-07!24;UBERON:0004141!6.34e-07!24;UBERON:0003084!6.34e-07!24;UBERON:0007005!6.34e-07!24;UBERON:0004139!6.34e-07!24;UBERON:0004291!6.34e-07!24 | |||
|ontology_enrichment_uberon_v019=UBERON:0000490;1.18e-08;33!UBERON:0000487;3.07e-08;22!UBERON:0000947;8.04e-08;21!UBERON:0010191;8.04e-08;21!UBERON:0007500;1.01e-07;56!UBERON:0001981;1.01e-07;56!UBERON:0004537;1.01e-07;56!UBERON:0000948;1.29e-07;22!UBERON:0004638;1.50e-07;18!UBERON:0001986;1.50e-07;18!UBERON:0004852;1.50e-07;18!UBERON:0001637;1.83e-07;42!UBERON:0003509;1.83e-07;42!UBERON:0004572;1.83e-07;42!UBERON:0004573;2.31e-07;33!UBERON:0004571;2.31e-07;33 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004872,1.02e-15,83;UBERON:0003914,4.03e-11,117;UBERON:0007500,1.13e-10,59;UBERON:0001981,1.13e-10,59;UBERON:0004537,1.13e-10,59;UBERON:0006965,1.13e-10,59;UBERON:0001637,1.70e-09,42;UBERON:0003509,1.70e-09,42;UBERON:0004572,1.70e-09,42;UBERON:0001048,1.05e-08,160;UBERON:0000055,1.99e-08,68;UBERON:0000487,2.22e-08,22;UBERON:0004535,2.85e-08,109;UBERON:0004573,4.29e-08,33;UBERON:0004571,4.29e-08,33;UBERON:0000947,5.85e-08,21;UBERON:0010191,5.85e-08,21;UBERON:0000490,8.12e-08,148;UBERON:0001009,1.06e-07,112;UBERON:0004638,1.24e-07,18;UBERON:0001986,1.24e-07,18;UBERON:0004852,1.24e-07,18;UBERON:0000948,2.12e-07,24;UBERON:0005498,2.12e-07,24;UBERON:0004140,2.12e-07,24;UBERON:0009881,2.12e-07,24;UBERON:0004141,2.12e-07,24;UBERON:0003084,2.12e-07,24;UBERON:0007005,2.12e-07,24;UBERON:0004139,2.12e-07,24;UBERON:0004291,2.12e-07,24;UBERON:0002049,2.86e-07,78;UBERON:0007798,2.86e-07,78;UBERON:0006914,8.42e-07,25 | |||
|phase1_expression=1.45342703416445,1.49870366723688,1.40954404095971,0,0.446961094427288,4.36169262050184,0,2.52687949370732,0,1.22866968250754,0,0.655324116390517,0,0,0,4.70627602516243,2.41077811209591,5.84248072309899,3.90346239032406,0,0,0,0,0,0,0.229240217243854,0.246301768349837,0,0,0,0.154816123316076,12.871897142705,3.31326510656075,2.58827807116751,0.232401601740905,0.142169232487422,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.224723484445085,0,0,0,0,0,0.426224750532694,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.587237189370939,0,0,0,0,0,0,0,0,0.32592226663359,0,0,0,0,0.221533894583621,0,0.128091319725675,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.34140171940727,6.52099065402005,0,0,0,0,0,0.283604451492204,0.665188192387692,0.527008714158756,0.458426764241994,2.91436230634034,1.85392221392215,0,0,0,0,0,0,4.77029777680092,4.30117297553062,6.94281003215189,14.1326985481002,0.419499436209906,2.20094433552054,1.67195973229448,0.258416759169329,0.35576626268671,0.33472061276467,2.01414658554573,3.80136052859256,0,3.67663080345869,0.81014194788176,1.51809538082936,2.2452937262617,0.675668882899933,3.06633274931766,6.6448596169769,2.5648244150257,0,0,3.48875241714027,1.49091585508596,2.27934920996244,1.32409180813219,0.286836620748814,1.77334191099179,7.8494864019923,1.06748995729705,7.89336154934912,4.04574346019696,5.79255889899659,3.59616186849609,0.756787138224657,3.45705554687999,0,0.936480230490962,2.2818872861778,0,0,0.323745888736263,0.421352420106746,0,0,0,0,0,0,0,0,0,0.277064115484183,0,0,0,2.1552114800404,0,0.427114777637135,0.423863802319124,0,0.824420233907511,0.257640540045629,0.18611685633159,0.168776332241266,0.0974370051611986,0,0.0920498986422993,4.20279747728911,0,0.10075209822764,0,21.0654329947994,18.0012439589951,19.5027124864523,0.121973706129595,0.397589304964456,0,0.10366105501537,0,0.36497735907583,0,0,0,0,0,1.77460200059766,0.674338760312407,1.44606617930089,0.992645754591546,1.08939722046203,0.949082476444386,0.808987848960987,1.17732879075208,0.769494313892781,0,0,0,0,0,0.982827216677626,2.36315962672562,0,0,2.57351715447788,2.85350742062426,2.24803506515239,28.9523440545497,14.3512089995721,0,0,4.3299402607582,0.115930404975077,4.57893907519705,1.01056513432752,0.462985512576611,0.570762456703795,0,0.858486162094873,0,0,0,7.49870671894216,16.2942664352894,13.6104093352691,6.71688920271362,16.8567684338098,4.60059214998253,0,0,0,0.144119953416961,0.12624243342638,0.253991577168676,0,0,0,0,0.901029173531752,0,0.112131084345361,0,0.8800594298514,20.0371159424556,0,2.535908257668,0,0,0,1.41849132023278,0,0.285955987316295,0,0,0,0,0.791951872933429,3.61727252471503,4.35766729300147,2.89921674427965,0,0,0,0,0,1.42636905040718,3.76431397335706,0.821905290201534,0.358121926479791,0,0,0,0,0.76228387266739,0,0,0,0,0,0,0,0.12269149171914,0,0,0.831883446123229,1.60586089917446,1.10391690523754,0.702848489956279,0,0,3.10419213877515,0.664225598535437,0.368738337083406,0.0868836144680828,0,0,0,0,0,0.303127571446259,0,0.30239029332968,3.72161711728165,0.153461973288062,1.12264037773229,1.40953064181271,4.60536524160033,0.160853921143607,1.48418066444991,1.07946785661859,2.66342587969691,0.410635780069046,4.67328986265259,1.51073491997947,0,16.0405176242628,1.56537681191024,0.34444334449382,0.182091168006717,0,0.451199612907412,0.539107359730903,0,0,0,0,0.170093705276516,0.215915916102139,0,0,0,0,0,0,0,0,0.256450125116389,0,0.325378394664303,1.03041011647722,0,0,2.29706215198469,6.50060246036521,1.6068392984416,0,0.462145851343933,0.307007349452259,0.137836572484531,0.644521469209642,0.725083469571143,0.255679882248303,0.623224249527161,6.7766815298001,13.6454947829225,9.18811529961006,1.51736671283325,1.39453664789186,0.62962469366128,0.6970372701606,1.54016790088044,2.12922412126809,3.47973196830029,1.11194531462352,1.71749864090389,0,0.949138274156178,0.571890581771475,0,0,0,0.78494864019923,0.359744915166629,0.54907405947211,0,3.03273722359974,6.34041284692033,7.16139375606268,0,0.731140468893853,0,0.272999822815972,0.565621727814851,0,1.65409603063837,0.66343897524122,0,0,0,1.21746226177622,0.92947049429925,3.66204283291914,1.86434757865267,1.67023369722306,2.1400263088875,1.06428319221179,0.633322905892992,0.329294892959902,0,0.699869440489966,13.4710957815717,4.02181365321472,3.26672954583968,0.564862804660675,5.16606447205476,10.1082885400575,6.20802214951346,18.6075954167637,0,0,0,0,0,0,0,0,0,0,4.6557641036396,0,0.144269212976445,0,0.159426272728822,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.33307196799782,0,0,0.73254089635947,0,0,0,1.19372242368845,0.593929361665277,3.68592842519078,0,0.281338832821026,15.1379838831152,0,0,0.398495976502139,0.552567831062295,0.251932747854276,0.102268682502155,0,0,3.59473404589307,0.716084698702437,0,0.394573622547734,0,1.11136990144637,0,0.0927680981618513,0,0.260427761085233,0,0,5.91725931084598,2.79679015322043,0,0,0,0,0.885741385813839,0,0,0.221158519862449,0.295547618953547,0,0,6.13464474825854,0.153900517007594,1.02547850262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| |||
|short_description=p@chr14:59830398..59830424,+ | |||
}} |
Revision as of 04:55, 11 September 2013
Short description: | p@chr14:59830398..59830424, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr14:59830398..59830424, + |
Coexpression cluster: | C2304_malignant_mesothelioma_Keratinocyte_Mesenchymal_oral_epidermoid_Mammary |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
squamous epithelial cell | 1.89e-25 | 63 |
epithelial cell | 7.81e-24 | 253 |
embryonic cell | 9.95e-16 | 250 |
endo-epithelial cell | 2.75e-12 | 42 |
endodermal cell | 9.90e-10 | 58 |
cardiocyte | 2.15e-09 | 16 |
respiratory epithelial cell | 2.62e-09 | 13 |
mesothelial cell | 2.89e-08 | 19 |
mesodermal cell | 6.10e-08 | 121 |
blood vessel endothelial cell | 1.24e-07 | 18 |
embryonic blood vessel endothelial progenitor cell | 1.24e-07 | 18 |
Ontology term | p-value | n |
---|---|---|
splanchnic layer of lateral plate mesoderm | 1.02e-15 | 83 |
epithelial tube | 4.03e-11 | 117 |
epithelial tube open at both ends | 1.13e-10 | 59 |
blood vessel | 1.13e-10 | 59 |
blood vasculature | 1.13e-10 | 59 |
vascular cord | 1.13e-10 | 59 |
artery | 1.70e-09 | 42 |
arterial blood vessel | 1.70e-09 | 42 |
arterial system | 1.70e-09 | 42 |
primordium | 1.05e-08 | 160 |
vessel | 1.99e-08 | 68 |
simple squamous epithelium | 2.22e-08 | 22 |
cardiovascular system | 2.85e-08 | 109 |
systemic artery | 4.29e-08 | 33 |
systemic arterial system | 4.29e-08 | 33 |
aorta | 5.85e-08 | 21 |
aortic system | 5.85e-08 | 21 |
unilaminar epithelium | 8.12e-08 | 148 |
circulatory system | 1.06e-07 | 112 |
blood vessel endothelium | 1.24e-07 | 18 |
endothelium | 1.24e-07 | 18 |
cardiovascular system endothelium | 1.24e-07 | 18 |
heart | 2.12e-07 | 24 |
primitive heart tube | 2.12e-07 | 24 |
primary heart field | 2.12e-07 | 24 |
anterior lateral plate mesoderm | 2.12e-07 | 24 |
heart tube | 2.12e-07 | 24 |
heart primordium | 2.12e-07 | 24 |
cardiac mesoderm | 2.12e-07 | 24 |
cardiogenic plate | 2.12e-07 | 24 |
heart rudiment | 2.12e-07 | 24 |
vasculature | 2.86e-07 | 78 |
vascular system | 2.86e-07 | 78 |
squamous epithelium | 8.42e-07 | 25 |
Ontology term | p-value | n |
---|---|---|
squamous cell carcinoma | 9.09e-10 | 14 |
ovarian cancer | 8.01e-08 | 14 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.