FFCP PHASE1:Hg19::chr14:61844954..61844958,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=N|UniProt=NA|association_with_transcript=NA|coexpression_cluster_id=C736|description=CAGE_peak_at_chr14:61844954..61844958,+|id=chr14:61844954..61844958,+|ontology_enrichment_celltype=CL:0000791!3.46e-15!18;CL:0000789!3.46e-15!18;CL:0002420!3.46e-15!18;CL:0002419!3.46e-15!18;CL:0000790!3.46e-15!18;CL:0000084!1.57e-13!25;CL:0000827!1.57e-13!25;CL:0000838!4.66e-11!52;CL:0000542!1.14e-10!53;CL:0000051!1.14e-10!53;CL:0000624!3.54e-08!6;CL:0000625!5.30e-08!11|ontology_enrichment_celltype_v019=CL:0000791;1.22e-28;18!CL:0000789;1.22e-28;18!CL:0002419;1.22e-28;18!CL:0000084;9.23e-24;25!CL:0000624;4.58e-19;6!CL:0000623;7.85e-15;3!CL:0000226;1.08e-14;3!CL:0000842;1.08e-14;3!CL:0000625;1.68e-14;11!CL:0000542;5.51e-10;53!CL:0000898;6.84e-07;3|ontology_enrichment_celltype_v019_2=CL:0000791,5.44e-29,18;CL:0000789,5.44e-29,18;CL:0002420,5.44e-29,18;CL:0002419,5.44e-29,18;CL:0000790,5.44e-29,18;CL:0000084,6.30e-24,25;CL:0000827,6.30e-24,25;CL:0000624,3.16e-19,6;CL:0000838,1.45e-16,52;CL:0000542,3.46e-16,53;CL:0000051,3.46e-16,53;CL:0000623,5.44e-15,3;CL:0000825,5.44e-15,3;CL:0000625,1.04e-14,11;CL:0000226,1.19e-14,3;CL:0000842,1.19e-14,3;CL:0002087,4.04e-11,115;CL:0000738,9.94e-09,136;CL:0002031,4.49e-07,120;CL:0000898,4.71e-07,3|ontology_enrichment_development_v019=CL:0000790;1.22e-28;18!CL:0000051;5.51e-10;53|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0007023!7.50e-20!115;UBERON:0004177!6.28e-07!7;UBERON:0000178!9.27e-07!15;UBERON:0000179!9.27e-07!15;UBERON:0000463!9.27e-07!15|ontology_enrichment_uberon_v019=UBERON:0000178;5.87e-14;15!UBERON:0000179;5.87e-14;15!UBERON:0000463;5.87e-14;15|ontology_enrichment_uberon_v019_2=UBERON:0000178,5.61e-14,15;UBERON:0000179,5.61e-14,15;UBERON:0000463,5.61e-14,15|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.534893840235659,0.492603536699674,0.708397031823113,0,0,0.464448369948228,0,0,0,0,0,0.293600439334847,1.10799081706375,0.601633342410425,1.95309783644267,0,0.32389366601898,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188242339542605,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.605399502633369,0,0,0,0,0,0.112328631146495,0.150176892841506,0,0.285012743741249,0,0,0,0,0,0,0,0,0,0,0,0,0.382273228125229,0,0.560508562981536,0,1.37696839079683,10.2182798314783,4.11202997999018,0.334372990781356,0.977766799900771,2.36723902867367,5.84480185223734,1.11410456885174,2.65145316727353,0.886135578334485,1.08321545506006,2.0494611156108,1.43065282315866,2.30213066445147,3.03985019564433,1.73881851441031,3.41059095272739,3.21048993707656,5.22677619024884,0.566546713487831,1.91610246800961,3.4362744548263,0.506039384039006,0.318565414324097,6.51083453856419,1.90090408889675,0.602300476311091,0.255973222308837,0,1.65744076430812,0,1.61285394579786,4.27904313253612,5.06885413589796,0,0,0,0,0,0,0,0,0.189069634328136,0.221729397462564,0.175669571386252,0.458426764241994,0,0,0,0,0,0.238490624305342,0,0.371457501329565,0,0,0,0,0,0,0,0.258416759169329,0,0.66944122552934,0.402829317109147,0,0.24406205754817,0,0,0.267899184852239,0.22452937262617,0.112611480483322,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.576175924479999,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134831308160164,0,0,0,0,0,0,0,0,0.590789906681404,0,0,0,0,0,0,0,0,0,0,0,0,0.144366447761074,0,0.761016608938393,0,0,0,0,0,0.93733833986777,0,0,0,0,0,0,0,0,0.144119953416961,0.12624243342638,0,0,0,0,0,0,0,0,0.43596006883328,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205476322550383,0,0.784596007954691,1.77327684181734,6.253199670926,7.82892521306465,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117141414992713,0,0,1.03473071292505,0,0,0,0,0,3.3082884179662,3.01999881146064,2.34800627167578,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0770153371044148,0,0,0,0,0,0.215915916102139,0,0,0,0,0,0,0,0,0,0,0,0.412164046590889,0,0,0,0,0,0,0,0,0,0,0,0.0852266274161009,0,0,0,0.127612712494584,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188287601553558,0,0,0,0,0.507447609232169,0.764637207142375,1.13929437434833,0.476463550915578,1.64544909234478,0,0,1.58625035258854,0,0,0.245040215981032,0,0,0.569134746787313,0.159426272728822,0,0,0.423347165447766,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.73254089635947,0,0,0,0.23874448473769,0,0,0,0,0,0,0,1.19548792950642,0.552567831062295,0,0,0.861593638227486,0,0,0,0,0.493217028184668,4.7896618469388,0,0,0,0,0,0.0874599999961957,0,0.227586896570999,0,0,0.344743373241465,0,0,0,0.361789315876224,0,0,0,0,0,0.139423744278603,0.230850775511391,0,0,0.179515288819544,0.108647371922008,0,0,0,1.02193298195737,0,0,0,0,0,0,0,0,0,0.141353071433941,0,0,0.265372693510018,0,0,0,0,0.067401132980677,0,0,0,0.391329237864179,0.485560759068186,0.394584402849391,1.20990716048664,0,0.442306057399416,0.15032341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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=N | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C736 | |||
|description=CAGE_peak_at_chr14:61844954..61844958,+ | |||
|id=chr14:61844954..61844958,+ | |||
|ontology_enrichment_celltype=CL:0000791!3.46e-15!18;CL:0000789!3.46e-15!18;CL:0002420!3.46e-15!18;CL:0002419!3.46e-15!18;CL:0000790!3.46e-15!18;CL:0000084!1.57e-13!25;CL:0000827!1.57e-13!25;CL:0000838!4.66e-11!52;CL:0000542!1.14e-10!53;CL:0000051!1.14e-10!53;CL:0000624!3.54e-08!6;CL:0000625!5.30e-08!11 | |||
|ontology_enrichment_celltype_v019=CL:0000791;1.22e-28;18!CL:0000789;1.22e-28;18!CL:0002419;1.22e-28;18!CL:0000084;9.23e-24;25!CL:0000624;4.58e-19;6!CL:0000623;7.85e-15;3!CL:0000226;1.08e-14;3!CL:0000842;1.08e-14;3!CL:0000625;1.68e-14;11!CL:0000542;5.51e-10;53!CL:0000898;6.84e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000791,5.44e-29,18;CL:0000789,5.44e-29,18;CL:0002420,5.44e-29,18;CL:0002419,5.44e-29,18;CL:0000790,5.44e-29,18;CL:0000084,6.30e-24,25;CL:0000827,6.30e-24,25;CL:0000624,3.16e-19,6;CL:0000838,1.45e-16,52;CL:0000542,3.46e-16,53;CL:0000051,3.46e-16,53;CL:0000623,5.44e-15,3;CL:0000825,5.44e-15,3;CL:0000625,1.04e-14,11;CL:0000226,1.19e-14,3;CL:0000842,1.19e-14,3;CL:0002087,4.04e-11,115;CL:0000738,9.94e-09,136;CL:0002031,4.49e-07,120;CL:0000898,4.71e-07,3 | |||
|ontology_enrichment_development_v019=CL:0000790;1.22e-28;18!CL:0000051;5.51e-10;53 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!7.50e-20!115;UBERON:0004177!6.28e-07!7;UBERON:0000178!9.27e-07!15;UBERON:0000179!9.27e-07!15;UBERON:0000463!9.27e-07!15 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;5.87e-14;15!UBERON:0000179;5.87e-14;15!UBERON:0000463;5.87e-14;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,5.61e-14,15;UBERON:0000179,5.61e-14,15;UBERON:0000463,5.61e-14,15 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.534893840235659,0.492603536699674,0.708397031823113,0,0,0.464448369948228,0,0,0,0,0,0.293600439334847,1.10799081706375,0.601633342410425,1.95309783644267,0,0.32389366601898,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188242339542605,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.605399502633369,0,0,0,0,0,0.112328631146495,0.150176892841506,0,0.285012743741249,0,0,0,0,0,0,0,0,0,0,0,0,0.382273228125229,0,0.560508562981536,0,1.37696839079683,10.2182798314783,4.11202997999018,0.334372990781356,0.977766799900771,2.36723902867367,5.84480185223734,1.11410456885174,2.65145316727353,0.886135578334485,1.08321545506006,2.0494611156108,1.43065282315866,2.30213066445147,3.03985019564433,1.73881851441031,3.41059095272739,3.21048993707656,5.22677619024884,0.566546713487831,1.91610246800961,3.4362744548263,0.506039384039006,0.318565414324097,6.51083453856419,1.90090408889675,0.602300476311091,0.255973222308837,0,1.65744076430812,0,1.61285394579786,4.27904313253612,5.06885413589796,0,0,0,0,0,0,0,0,0.189069634328136,0.221729397462564,0.175669571386252,0.458426764241994,0,0,0,0,0,0.238490624305342,0,0.371457501329565,0,0,0,0,0,0,0,0.258416759169329,0,0.66944122552934,0.402829317109147,0,0.24406205754817,0,0,0.267899184852239,0.22452937262617,0.112611480483322,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.576175924479999,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134831308160164,0,0,0,0,0,0,0,0,0.590789906681404,0,0,0,0,0,0,0,0,0,0,0,0,0.144366447761074,0,0.761016608938393,0,0,0,0,0,0.93733833986777,0,0,0,0,0,0,0,0,0.144119953416961,0.12624243342638,0,0,0,0,0,0,0,0,0.43596006883328,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205476322550383,0,0.784596007954691,1.77327684181734,6.253199670926,7.82892521306465,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117141414992713,0,0,1.03473071292505,0,0,0,0,0,3.3082884179662,3.01999881146064,2.34800627167578,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0770153371044148,0,0,0,0,0,0.215915916102139,0,0,0,0,0,0,0,0,0,0,0,0.412164046590889,0,0,0,0,0,0,0,0,0,0,0,0.0852266274161009,0,0,0,0.127612712494584,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188287601553558,0,0,0,0,0.507447609232169,0.764637207142375,1.13929437434833,0.476463550915578,1.64544909234478,0,0,1.58625035258854,0,0,0.245040215981032,0,0,0.569134746787313,0.159426272728822,0,0,0.423347165447766,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.73254089635947,0,0,0,0.23874448473769,0,0,0,0,0,0,0,1.19548792950642,0.552567831062295,0,0,0.861593638227486,0,0,0,0,0.493217028184668,4.7896618469388,0,0,0,0,0,0.0874599999961957,0,0.227586896570999,0,0,0.344743373241465,0,0,0,0.361789315876224,0,0,0,0,0,0.139423744278603,0.230850775511391,0,0,0.179515288819544,0.108647371922008,0,0,0,1.02193298195737,0,0,0,0,0,0,0,0,0,0.141353071433941,0,0,0.265372693510018,0,0,0,0,0.067401132980677,0,0,0,0.391329237864179,0.485560759068186,0.394584402849391,1.20990716048664,0,0.442306057399416,0.150323419414493,0,0,0,0,0,0,0,0,0.195984794828755,0.0870592065804026,0.34945333648406,0,0,0,0,0.193978032976839,0,0,0,0,0.0633107959558787,0,0,0.426905989478705,0.19980960958213,0.144090417154106,0,0.171594997861965,0.14405479798815,0.124252535565433,0,0,0,0,0,0,0,0,0,0,0.279282401272254,1.14580212005842,1.43574604915363,0.199679000498991,0.429226048136571,0,0.268733889946905,0,0,0,0,0,0,0,0,0.272406812223151,0,0,0,0,0,0,0,0.157611414598396,0.157363764404994,0,0,0.191915197319445,0,0,0,0,0,0,0,0,0,0,0,0,0.129282956361551,0.52893040697076,0,0.704815022316672,0.747511887973863,0.157204305099666,0.828478110694391,0,0,0.121792598380896,0,0,0,0,0,0.157054096250234,0.886068179966986,0,0.250381861413,0,0.110929051536852,0.124192805882767,0.138348634936231,0.124980407962107,0,0,0,0,0.144921028610825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.231522474323834,0,0,0,0,0,0,0,0,0,0,0.553033744606923,0,0,0,0,0,0,0,0.106691729694141,0,0,0,0,0,0,0,0,0,0,0,0.123935764259002,0.558644917973244,0,0,0,0,0,0.0642292250964595,0,0,0,0,0,0,1.42769420259154,0.0981477185010256,0,0,0,0,0,0,0.0752103283492573,0,0,0.261906694481422,0.163771917510097,0.147856086217045,0.202612753855184,0,0.206686796501184,0.19024743058172,0,0,0.496211178389294,0.351742488719241,0,0,0,0.606965604236632,1.13831095675649,0,0.115233987555779,0,0.203909198930495,0,0.236387681767936,0.222462803784138,0.156986185701028,0.628462359664008,0,0,0,0,0.428859265059938,0,0,0.173858272302579,0,0.207216164163037,0,0,0.430227358820278,0,0,0,0,0.31020638566432,0,0,0,0.121917924982269,0.647428837187895,0.102662806856247,0,0,0,0,0,0,0,0.150962843566674,0.154348316215889,0.874238242015829,0,0,0,0.196308467114945,0,0,0,0.187967835959707,0.386747327841463,0.89947040332436,0,0,0,0,0.917458566809082,0.716697915757256,0,0,0,0,0,0,0,0,0,0,0,0.26721740526556,0,0,0.0757786982182394,0.267964130156178,0,0.310298987585686,0.426467963801962,0,0.129177819672012,0.558672428662721,0.11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| |||
|short_description=p@chr14:61844954..61844958,+ | |||
}} |
Revision as of 05:00, 11 September 2013
Short description: | p@chr14:61844954..61844958, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr14:61844954..61844958, + |
Coexpression cluster: | C736_CD4_CD8_Natural_Neutrophils_Peripheral_Hepatocyte_cerebellum |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mature alpha-beta T cell | 5.44e-29 | 18 |
alpha-beta T cell | 5.44e-29 | 18 |
immature T cell | 5.44e-29 | 18 |
mature T cell | 5.44e-29 | 18 |
immature alpha-beta T cell | 5.44e-29 | 18 |
T cell | 6.30e-24 | 25 |
pro-T cell | 6.30e-24 | 25 |
CD4-positive, alpha-beta T cell | 3.16e-19 | 6 |
lymphoid lineage restricted progenitor cell | 1.45e-16 | 52 |
lymphocyte | 3.46e-16 | 53 |
common lymphoid progenitor | 3.46e-16 | 53 |
natural killer cell | 5.44e-15 | 3 |
pro-NK cell | 5.44e-15 | 3 |
CD8-positive, alpha-beta T cell | 1.04e-14 | 11 |
single nucleate cell | 1.19e-14 | 3 |
mononuclear cell | 1.19e-14 | 3 |
nongranular leukocyte | 4.04e-11 | 115 |
leukocyte | 9.94e-09 | 136 |
hematopoietic lineage restricted progenitor cell | 4.49e-07 | 120 |
naive T cell | 4.71e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
blood | 5.61e-14 | 15 |
haemolymphatic fluid | 5.61e-14 | 15 |
organism substance | 5.61e-14 | 15 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.