FFCP PHASE1:Hg19::chr14:81859777..81859783,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=N|UniProt=NA|association_with_transcript=NA|coexpression_cluster_id=C178|description=CAGE_peak_at_chr14:81859777..81859783,-|id=chr14:81859777..81859783,-|ontology_enrichment_celltype=CL:0002621!1.17e-14!3;CL:0002076!8.99e-13!43;CL:0002368!3.84e-12!13;CL:0000244!5.07e-11!4;CL:0000731!5.07e-11!4;CL:0000223!2.90e-10!59;CL:0000066!2.20e-07!254;CL:0002328!2.83e-07!3;CL:0002166!6.01e-07!3|ontology_enrichment_celltype_v019=CL:0002328;1.83e-14;3!CL:0002621;1.83e-14;3!CL:0002368;3.64e-13;13!CL:0002076;1.98e-08;42|ontology_enrichment_celltype_v019_2=CL:0002328,1.60e-14,3;CL:0002621,1.83e-14,3;CL:0002368,3.64e-13,13;CL:0002076,2.90e-09,42;CL:0000223,6.54e-07,58|ontology_enrichment_development_v019=UBERON:0004872;1.02e-23;7|ontology_enrichment_disease=DOID:1749!1.17e-07!14|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001949!1.17e-14!3;UBERON:0000365!1.28e-14!5;UBERON:0005910!3.35e-12!6;UBERON:0002106!2.02e-07!3;UBERON:0004854!2.02e-07!3;UBERON:0009034!2.02e-07!3;UBERON:0002095!2.02e-07!3;UBERON:0004782!2.02e-07!3;UBERON:0003281!2.02e-07!3;UBERON:0009664!2.02e-07!3;UBERON:0002296!2.02e-07!3;UBERON:0005602!2.02e-07!3;UBERON:0001179!2.02e-07!3;UBERON:0006293!2.02e-07!3;UBERON:0004815!2.83e-07!3;UBERON:0002031!2.83e-07!3;UBERON:0000161!6.58e-07!35;UBERON:0004119!7.27e-07!169;UBERON:0000925!7.27e-07!169;UBERON:0006595!7.27e-07!169|ontology_enrichment_uberon_v019=UBERON:0002106;1.28e-53;3!UBERON:0004177;1.05e-32;5!UBERON:0005057;1.05e-32;5!UBERON:0004815;1.83e-14;3!UBERON:0002031;1.83e-14;3!UBERON:0001949;1.83e-14;3!UBERON:0002075;6.79e-10;18!UBERON:0002185;3.22e-09;5!UBERON:0004807;3.39e-08;22!UBERON:0004119;9.48e-08;158!UBERON:0000485;6.04e-07;7!UBERON:0003929;6.04e-07;7!UBERON:0000077;6.43e-07;27!UBERON:0002405;6.43e-07;27|ontology_enrichment_uberon_v019_2=UBERON:0002106,1.28e-53,3;UBERON:0004854,1.28e-53,3;UBERON:0009034,1.28e-53,3;UBERON:0002095,1.28e-53,3;UBERON:0004782,1.28e-53,3;UBERON:0003281,1.28e-53,3;UBERON:0009664,1.28e-53,3;UBERON:0002296,1.28e-53,3;UBERON:0005602,1.28e-53,3;UBERON:0001179,1.28e-53,3;UBERON:0006293,1.28e-53,3;UBERON:0004177,1.02e-23,7;UBERON:0005057,1.02e-23,7;UBERON:0000945,6.64e-21,8;UBERON:0010039,6.64e-21,8;UBERON:0004815,1.60e-14,3;UBERON:0002031,1.60e-14,3;UBERON:0001949,1.83e-14,3;UBERON:0004457,2.57e-14,12;UBERON:0000042,2.57e-14,12;UBERON:0003887,2.57e-14,12;UBERON:0002075,6.79e-10,18;UBERON:0002185,2.97e-09,5;UBERON:0005409,3.78e-07,25;UBERON:0004119,9.48e-07,160;UBERON:0000925,9.48e-07,160;UBERON:0006595,9.48e-07,160|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.83884244895785,0.6024118375565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.169560592310488,1.54608682530637,0.272746120590835,0.860413786167011,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.590789906681404,0,0,0,0.109750285408626,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.93733833986777,0,0.141775097242386,0.179117045405697,0.581267877027924,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.356857977594324,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.802025881213139,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.145016693914229,0,0,0.165284915360978,0.192190067365106,1.40373983744043,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.384888450902048,0,0,0,0.43050537267123,0,0.443430153536676,0.689170200620878,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.293016358543788,0,0,0,0,0,0,0,0,0,0,0,0.19924798825107,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120596438625408,0,0,0,0,0,0,0.0769502585037971,0,0.23056390438806,0.0897576444097721,0.108647371922008,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0979923974143777,0.0870592065804026,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0846733320657845,0,0,0,0,0,0,0,0,0,0.0788057072991982,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.638341257770182,0,0.5013797880454,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.380805212168795,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.392590874004102,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.078493092850514,0,0,0,0,0,0,0,0,0,0,0,0.17071847709395,0,0,0,0,0,0,0,0,0.111855431797792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.94732455515385,4.64096793409756,0,0,0.352894871715692,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0757786982182394,0,0,0,0,0,0,0.186224142887574,0,0,0,0,0,0,0,0,0.0814032686109745,0,0,0,0,0,0,0,0,0|short_description=p@chr14:81859777..81859783,-}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=N | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C178 | |||
|description=CAGE_peak_at_chr14:81859777..81859783,- | |||
|id=chr14:81859777..81859783,- | |||
|ontology_enrichment_celltype=CL:0002621!1.17e-14!3;CL:0002076!8.99e-13!43;CL:0002368!3.84e-12!13;CL:0000244!5.07e-11!4;CL:0000731!5.07e-11!4;CL:0000223!2.90e-10!59;CL:0000066!2.20e-07!254;CL:0002328!2.83e-07!3;CL:0002166!6.01e-07!3 | |||
|ontology_enrichment_celltype_v019=CL:0002328;1.83e-14;3!CL:0002621;1.83e-14;3!CL:0002368;3.64e-13;13!CL:0002076;1.98e-08;42 | |||
|ontology_enrichment_celltype_v019_2=CL:0002328,1.60e-14,3;CL:0002621,1.83e-14,3;CL:0002368,3.64e-13,13;CL:0002076,2.90e-09,42;CL:0000223,6.54e-07,58 | |||
|ontology_enrichment_development_v019=UBERON:0004872;1.02e-23;7 | |||
|ontology_enrichment_disease=DOID:1749!1.17e-07!14 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001949!1.17e-14!3;UBERON:0000365!1.28e-14!5;UBERON:0005910!3.35e-12!6;UBERON:0002106!2.02e-07!3;UBERON:0004854!2.02e-07!3;UBERON:0009034!2.02e-07!3;UBERON:0002095!2.02e-07!3;UBERON:0004782!2.02e-07!3;UBERON:0003281!2.02e-07!3;UBERON:0009664!2.02e-07!3;UBERON:0002296!2.02e-07!3;UBERON:0005602!2.02e-07!3;UBERON:0001179!2.02e-07!3;UBERON:0006293!2.02e-07!3;UBERON:0004815!2.83e-07!3;UBERON:0002031!2.83e-07!3;UBERON:0000161!6.58e-07!35;UBERON:0004119!7.27e-07!169;UBERON:0000925!7.27e-07!169;UBERON:0006595!7.27e-07!169 | |||
|ontology_enrichment_uberon_v019=UBERON:0002106;1.28e-53;3!UBERON:0004177;1.05e-32;5!UBERON:0005057;1.05e-32;5!UBERON:0004815;1.83e-14;3!UBERON:0002031;1.83e-14;3!UBERON:0001949;1.83e-14;3!UBERON:0002075;6.79e-10;18!UBERON:0002185;3.22e-09;5!UBERON:0004807;3.39e-08;22!UBERON:0004119;9.48e-08;158!UBERON:0000485;6.04e-07;7!UBERON:0003929;6.04e-07;7!UBERON:0000077;6.43e-07;27!UBERON:0002405;6.43e-07;27 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002106,1.28e-53,3;UBERON:0004854,1.28e-53,3;UBERON:0009034,1.28e-53,3;UBERON:0002095,1.28e-53,3;UBERON:0004782,1.28e-53,3;UBERON:0003281,1.28e-53,3;UBERON:0009664,1.28e-53,3;UBERON:0002296,1.28e-53,3;UBERON:0005602,1.28e-53,3;UBERON:0001179,1.28e-53,3;UBERON:0006293,1.28e-53,3;UBERON:0004177,1.02e-23,7;UBERON:0005057,1.02e-23,7;UBERON:0000945,6.64e-21,8;UBERON:0010039,6.64e-21,8;UBERON:0004815,1.60e-14,3;UBERON:0002031,1.60e-14,3;UBERON:0001949,1.83e-14,3;UBERON:0004457,2.57e-14,12;UBERON:0000042,2.57e-14,12;UBERON:0003887,2.57e-14,12;UBERON:0002075,6.79e-10,18;UBERON:0002185,2.97e-09,5;UBERON:0005409,3.78e-07,25;UBERON:0004119,9.48e-07,160;UBERON:0000925,9.48e-07,160;UBERON:0006595,9.48e-07,160 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.83884244895785,0.6024118375565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.169560592310488,1.54608682530637,0.272746120590835,0.860413786167011,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.590789906681404,0,0,0,0.109750285408626,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.93733833986777,0,0.141775097242386,0.179117045405697,0.581267877027924,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.356857977594324,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.802025881213139,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.145016693914229,0,0,0.165284915360978,0.192190067365106,1.40373983744043,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.384888450902048,0,0,0,0.43050537267123,0,0.443430153536676,0.689170200620878,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.293016358543788,0,0,0,0,0,0,0,0,0,0,0,0.19924798825107,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120596438625408,0,0,0,0,0,0,0.0769502585037971,0,0.23056390438806,0.0897576444097721,0.108647371922008,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0979923974143777,0.0870592065804026,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0846733320657845,0,0,0,0,0,0,0,0,0,0.0788057072991982,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.638341257770182,0,0.5013797880454,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.380805212168795,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.392590874004102,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.078493092850514,0,0,0,0,0,0,0,0,0,0,0,0.17071847709395,0,0,0,0,0,0,0,0,0.111855431797792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.94732455515385,4.64096793409756,0,0,0.352894871715692,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0757786982182394,0,0,0,0,0,0,0.186224142887574,0,0,0,0,0,0,0,0,0.0814032686109745,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr14:81859777..81859783,- | |||
}} |
Revision as of 05:47, 11 September 2013
Short description: | p@chr14:81859777..81859783, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr14:81859777..81859783, - |
Coexpression cluster: | C178_spleen_liver_Hepatocyte_b_lymph_vein_thymus |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bronchial epithelial cell | 1.60e-14 | 3 |
gingival epithelial cell | 1.83e-14 | 3 |
respiratory epithelial cell | 3.64e-13 | 13 |
endo-epithelial cell | 2.90e-09 | 42 |
endodermal cell | 6.54e-07 | 58 |
Ontology term | p-value | n |
---|---|---|
spleen | 1.28e-53 | 3 |
gastrointestinal system mesentery | 1.28e-53 | 3 |
stomach region | 1.28e-53 | 3 |
mesentery | 1.28e-53 | 3 |
gastrointestinal system serosa | 1.28e-53 | 3 |
mesentery of stomach | 1.28e-53 | 3 |
gut mesentery | 1.28e-53 | 3 |
dorsal mesentery | 1.28e-53 | 3 |
dorsal mesogastrium | 1.28e-53 | 3 |
peritoneal cavity | 1.28e-53 | 3 |
spleen primordium | 1.28e-53 | 3 |
hemopoietic organ | 1.02e-23 | 7 |
immune organ | 1.02e-23 | 7 |
stomach | 6.64e-21 | 8 |
food storage organ | 6.64e-21 | 8 |
lower respiratory tract epithelium | 1.60e-14 | 3 |
epithelium of bronchus | 1.60e-14 | 3 |
gingival epithelium | 1.83e-14 | 3 |
cavity lining | 2.57e-14 | 12 |
serous membrane | 2.57e-14 | 12 |
intraembryonic coelom | 2.57e-14 | 12 |
viscus | 6.79e-10 | 18 |
bronchus | 2.97e-09 | 5 |
gastrointestinal system | 3.78e-07 | 25 |
endoderm-derived structure | 9.48e-07 | 160 |
endoderm | 9.48e-07 | 160 |
presumptive endoderm | 9.48e-07 | 160 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.