FFCP PHASE1:Hg19::chr15:39719330..39719335,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA|HGNC=|TSSclassifier=S|UniProt=|association_with_transcript=60bp_to_ENST00000558209_5end|coexpression_cluster_id=C82|description=CAGE_peak_6_at_ENST00000558209_5end|id=chr15:39719330..39719335,-|ontology_enrichment_celltype=CL:0002057!1.87e-35!42;CL:0000860!8.11e-33!45;CL:0000738!1.39e-30!140;CL:0000766!2.57e-27!76;CL:0002087!3.75e-25!119;CL:0000037!1.09e-23!172;CL:0000566!1.09e-23!172;CL:0000988!5.01e-22!182;CL:0002194!7.44e-22!63;CL:0000576!7.44e-22!63;CL:0000040!7.44e-22!63;CL:0000559!7.44e-22!63;CL:0000839!1.31e-21!70;CL:0000557!3.00e-21!71;CL:0002009!4.55e-21!65;CL:0002031!8.43e-20!124;CL:0002032!1.37e-19!165;CL:0000837!1.37e-19!165;CL:0000763!8.96e-19!112;CL:0000049!8.96e-19!112;CL:0000767!6.46e-17!3;CL:0000842!1.34e-16!3;CL:0000623!1.42e-15!3;CL:0000825!1.42e-15!3;CL:0002393!1.94e-14!9;CL:0002397!1.94e-14!9;CL:0000224!1.42e-12!4;CL:0000134!2.13e-10!358;CL:0002320!4.63e-10!365;CL:0000219!7.10e-09!390;CL:0000080!1.58e-08!6;CL:0000048!1.86e-07!430;CL:0000723!2.97e-07!436;CL:0000034!5.40e-07!444|ontology_enrichment_celltype_v019=CL:0000767;2.05e-50;3!CL:0002393;1.24e-25;6!CL:0002397;1.24e-25;6!CL:0000226;8.03e-23;3!CL:0000842;8.03e-23;3!CL:0000094;2.06e-19;8!CL:0000081;2.63e-14;11!CL:0000766;2.34e-13;69!CL:0000576;1.57e-11;48!CL:0000860;5.20e-08;33!CL:0002057;5.20e-08;33|ontology_enrichment_celltype_v019_2=CL:0000767,2.64e-50,3;CL:0000226,5.15e-23,3;CL:0000842,5.15e-23,3;CL:0000766,7.38e-22,72;CL:0000094,2.26e-19,8;CL:0000860,7.33e-19,42;CL:0002057,7.33e-19,42;CL:0002393,2.27e-17,9;CL:0002397,2.27e-17,9;CL:0000738,1.60e-16,136;CL:0000473,1.83e-16,48;CL:0000234,1.83e-16,48;CL:0000763,2.14e-14,108;CL:0000049,2.14e-14,108;CL:0000081,2.82e-14,11;CL:0000037,3.15e-13,168;CL:0002194,4.21e-13,59;CL:0000576,4.21e-13,59;CL:0000040,4.21e-13,59;CL:0000559,4.21e-13,59;CL:0002009,1.15e-12,61;CL:0000988,1.64e-12,177;CL:0000839,1.08e-11,66;CL:0000557,1.62e-11,67;CL:0002087,7.71e-11,115;CL:0002032,2.07e-09,161;CL:0000837,2.07e-09,161|ontology_enrichment_development_v019=CL:0002057;9.41e-15;42|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002390!4.30e-19!102;UBERON:0003061!4.30e-19!102;UBERON:0002371!2.07e-18!80;UBERON:0002193!5.80e-17!112;UBERON:0001474!7.61e-17!86;UBERON:0004765!9.65e-14!101;UBERON:0001434!9.65e-14!101;UBERON:0002405!1.41e-11!115;UBERON:0002384!1.33e-09!375;UBERON:0003081!4.23e-09!216;UBERON:0002204!9.67e-07!167|ontology_enrichment_uberon_v019=|ontology_enrichment_uberon_v019_2=UBERON:0002390,7.97e-13,98;UBERON:0003061,7.97e-13,98;UBERON:0002193,1.39e-11,108;UBERON:0002371,4.02e-10,76;UBERON:0001474,2.33e-09,82;UBERON:0004765,1.70e-08,90;UBERON:0002405,3.27e-08,93;UBERON:0001434,1.31e-07,100|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.18009283054671,3.83829398097213,4.18003532953405,0,0,0,0,0,0,1.66198622559563,4.01088894940283,3.90619567288533,0,0,0,0,0,0,0.232429036905685,0,0,0.575384784644301,0.512321413058201,0.236482229888585,1.72372840368309,0,0,0.376484679085209,0,0,0,0,0,0,1.19678194572979,0,0.290209238628584,0,0,1.00499466102697,0,0.868755378820466,0,0,0,0,0.850417199860174,0.209658645508376,1.12328631146495,0.901061357049038,0.32145117339416,0,0,0,0,0,0,0,0,0,0,0,0,0,0.382273228125229,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.253019692019503,0,0,0,0,0,0,0,0,0,0.534880391567015,0.434473211648397,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.208994966536811,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132409180813219,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.252433774244115,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.464367928031979,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144119953416961,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.591092280605782,0.215627574859517,0.385029108839245,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.44737618286021,1.72571360654893,0.640365346820666,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.296964680832639,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.414239055347196,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.194860308839388,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0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| ||
|DPIdataset=robustDPI | |||
|EntrezGene= | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |||
|TSSclassifier=S | |||
|UniProt= | |||
|association_with_transcript=60bp_to_ENST00000558209_5end | |||
|coexpression_cluster_id=C82 | |||
|description=CAGE_peak_6_at_ENST00000558209_5end | |||
|id=chr15:39719330..39719335,- | |||
|ontology_enrichment_celltype=CL:0002057!1.87e-35!42;CL:0000860!8.11e-33!45;CL:0000738!1.39e-30!140;CL:0000766!2.57e-27!76;CL:0002087!3.75e-25!119;CL:0000037!1.09e-23!172;CL:0000566!1.09e-23!172;CL:0000988!5.01e-22!182;CL:0002194!7.44e-22!63;CL:0000576!7.44e-22!63;CL:0000040!7.44e-22!63;CL:0000559!7.44e-22!63;CL:0000839!1.31e-21!70;CL:0000557!3.00e-21!71;CL:0002009!4.55e-21!65;CL:0002031!8.43e-20!124;CL:0002032!1.37e-19!165;CL:0000837!1.37e-19!165;CL:0000763!8.96e-19!112;CL:0000049!8.96e-19!112;CL:0000767!6.46e-17!3;CL:0000842!1.34e-16!3;CL:0000623!1.42e-15!3;CL:0000825!1.42e-15!3;CL:0002393!1.94e-14!9;CL:0002397!1.94e-14!9;CL:0000224!1.42e-12!4;CL:0000134!2.13e-10!358;CL:0002320!4.63e-10!365;CL:0000219!7.10e-09!390;CL:0000080!1.58e-08!6;CL:0000048!1.86e-07!430;CL:0000723!2.97e-07!436;CL:0000034!5.40e-07!444 | |||
|ontology_enrichment_celltype_v019=CL:0000767;2.05e-50;3!CL:0002393;1.24e-25;6!CL:0002397;1.24e-25;6!CL:0000226;8.03e-23;3!CL:0000842;8.03e-23;3!CL:0000094;2.06e-19;8!CL:0000081;2.63e-14;11!CL:0000766;2.34e-13;69!CL:0000576;1.57e-11;48!CL:0000860;5.20e-08;33!CL:0002057;5.20e-08;33 | |||
|ontology_enrichment_celltype_v019_2=CL:0000767,2.64e-50,3;CL:0000226,5.15e-23,3;CL:0000842,5.15e-23,3;CL:0000766,7.38e-22,72;CL:0000094,2.26e-19,8;CL:0000860,7.33e-19,42;CL:0002057,7.33e-19,42;CL:0002393,2.27e-17,9;CL:0002397,2.27e-17,9;CL:0000738,1.60e-16,136;CL:0000473,1.83e-16,48;CL:0000234,1.83e-16,48;CL:0000763,2.14e-14,108;CL:0000049,2.14e-14,108;CL:0000081,2.82e-14,11;CL:0000037,3.15e-13,168;CL:0002194,4.21e-13,59;CL:0000576,4.21e-13,59;CL:0000040,4.21e-13,59;CL:0000559,4.21e-13,59;CL:0002009,1.15e-12,61;CL:0000988,1.64e-12,177;CL:0000839,1.08e-11,66;CL:0000557,1.62e-11,67;CL:0002087,7.71e-11,115;CL:0002032,2.07e-09,161;CL:0000837,2.07e-09,161 | |||
|ontology_enrichment_development_v019=CL:0002057;9.41e-15;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!4.30e-19!102;UBERON:0003061!4.30e-19!102;UBERON:0002371!2.07e-18!80;UBERON:0002193!5.80e-17!112;UBERON:0001474!7.61e-17!86;UBERON:0004765!9.65e-14!101;UBERON:0001434!9.65e-14!101;UBERON:0002405!1.41e-11!115;UBERON:0002384!1.33e-09!375;UBERON:0003081!4.23e-09!216;UBERON:0002204!9.67e-07!167 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,7.97e-13,98;UBERON:0003061,7.97e-13,98;UBERON:0002193,1.39e-11,108;UBERON:0002371,4.02e-10,76;UBERON:0001474,2.33e-09,82;UBERON:0004765,1.70e-08,90;UBERON:0002405,3.27e-08,93;UBERON:0001434,1.31e-07,100 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.18009283054671,3.83829398097213,4.18003532953405,0,0,0,0,0,0,1.66198622559563,4.01088894940283,3.90619567288533,0,0,0,0,0,0,0.232429036905685,0,0,0.575384784644301,0.512321413058201,0.236482229888585,1.72372840368309,0,0,0.376484679085209,0,0,0,0,0,0,1.19678194572979,0,0.290209238628584,0,0,1.00499466102697,0,0.868755378820466,0,0,0,0,0.850417199860174,0.209658645508376,1.12328631146495,0.901061357049038,0.32145117339416,0,0,0,0,0,0,0,0,0,0,0,0,0,0.382273228125229,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.253019692019503,0,0,0,0,0,0,0,0,0,0.534880391567015,0.434473211648397,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.208994966536811,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132409180813219,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.252433774244115,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.464367928031979,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144119953416961,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.591092280605782,0.215627574859517,0.385029108839245,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.44737618286021,1.72571360654893,0.640365346820666,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.296964680832639,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.414239055347196,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.194860308839388,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.098150233615243,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p6@ENST00000558209 | |||
}} |
Revision as of 06:47, 11 September 2013
Short description: | p6@ENST00000558209 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_6_at_ENST00000558209_5end |
Coexpression cluster: | C82_Basophils_CD14_Eosinophils_Natural_Peripheral_immature_CD34 |
Association with transcript: | 60bp_to_ENST00000558209_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
basophil | 2.64e-50 | 3 |
single nucleate cell | 5.15e-23 | 3 |
mononuclear cell | 5.15e-23 | 3 |
myeloid leukocyte | 7.38e-22 | 72 |
granulocyte | 2.26e-19 | 8 |
classical monocyte | 7.33e-19 | 42 |
CD14-positive, CD16-negative classical monocyte | 7.33e-19 | 42 |
intermediate monocyte | 2.27e-17 | 9 |
CD14-positive, CD16-positive monocyte | 2.27e-17 | 9 |
leukocyte | 1.60e-16 | 136 |
defensive cell | 1.83e-16 | 48 |
phagocyte | 1.83e-16 | 48 |
myeloid cell | 2.14e-14 | 108 |
common myeloid progenitor | 2.14e-14 | 108 |
blood cell | 2.82e-14 | 11 |
hematopoietic stem cell | 3.15e-13 | 168 |
monopoietic cell | 4.21e-13 | 59 |
monocyte | 4.21e-13 | 59 |
monoblast | 4.21e-13 | 59 |
promonocyte | 4.21e-13 | 59 |
macrophage dendritic cell progenitor | 1.15e-12 | 61 |
hematopoietic cell | 1.64e-12 | 177 |
myeloid lineage restricted progenitor cell | 1.08e-11 | 66 |
granulocyte monocyte progenitor cell | 1.62e-11 | 67 |
nongranular leukocyte | 7.71e-11 | 115 |
hematopoietic oligopotent progenitor cell | 2.07e-09 | 161 |
hematopoietic multipotent progenitor cell | 2.07e-09 | 161 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 7.97e-13 | 98 |
blood island | 7.97e-13 | 98 |
hemolymphoid system | 1.39e-11 | 108 |
bone marrow | 4.02e-10 | 76 |
bone element | 2.33e-09 | 82 |
skeletal element | 1.70e-08 | 90 |
immune system | 3.27e-08 | 93 |
skeletal system | 1.31e-07 | 100 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.