FFCP PHASE1:Hg19::chr16:30510842..30510881,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=100506928|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA|HGNC=|TSSclassifier=S|UniProt=Q6ZWE2|association_with_transcript=0bp_to_AK123224_5end|coexpression_cluster_id=C24|description=CAGE_peak_1_at_LOC100506928_5end|id=chr16:30510842..30510881,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_development_v019=UBERON:0006215;4.62e-10;3|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0007023!1.05e-18!115;UBERON:0004111!5.57e-11!241;UBERON:0001049!1.32e-10!57;UBERON:0005068!1.32e-10!57;UBERON:0006241!1.32e-10!57;UBERON:0007135!1.32e-10!57;UBERON:0000153!1.76e-10!129;UBERON:0007811!1.76e-10!129;UBERON:0000477!5.38e-10!286;UBERON:0000475!1.34e-09!365;UBERON:0000033!3.01e-09!123;UBERON:0004121!8.84e-09!169;UBERON:0000924!1.63e-08!173;UBERON:0006601!1.63e-08!173;UBERON:0002616!1.68e-08!59;UBERON:0003075!2.09e-08!86;UBERON:0007284!2.09e-08!86;UBERON:0000955!2.52e-08!69;UBERON:0006238!2.52e-08!69;UBERON:0002346!5.80e-08!90;UBERON:0001017!1.67e-07!82;UBERON:0005743!2.50e-07!86;UBERON:0000073!3.71e-07!94;UBERON:0001016!3.71e-07!94;UBERON:0001894!4.96e-07!7;UBERON:0006222!4.96e-07!7;UBERON:0000483!5.84e-07!309;UBERON:0000025!6.06e-07!194;UBERON:0000119!6.43e-07!312;UBERON:0001044!7.91e-07!6;UBERON:0003293!7.91e-07!6;UBERON:0003294!7.91e-07!6;UBERON:0010047!7.91e-07!6;UBERON:0000167!7.91e-07!6|ontology_enrichment_uberon_v019=UBERON:0003296;5.93e-13;4!UBERON:0010133;5.93e-13;4!UBERON:0001894;1.13e-10;7!UBERON:0002680;3.00e-08;9!UBERON:0001895;3.00e-08;9!UBERON:0001044;3.38e-08;6!UBERON:0003293;3.38e-08;6!UBERON:0003294;3.38e-08;6!UBERON:0010047;3.38e-08;6!UBERON:0003408;3.38e-08;6!UBERON:0000167;3.38e-08;6!UBERON:0001905;1.98e-07;2!UBERON:0002757;1.98e-07;2!UBERON:0010134;1.98e-07;2!UBERON:0005408;1.98e-07;2!UBERON:0001899;1.98e-07;2!UBERON:0002784;2.70e-07;4!UBERON:0000007;3.43e-07;2!UBERON:0001829;6.06e-07;2!UBERON:0002148;7.51e-07;2!UBERON:0006331;7.51e-07;2!UBERON:0009662;7.51e-07;2|ontology_enrichment_uberon_v019_2=UBERON:0003296,6.07e-13,4;UBERON:0010133,6.07e-13,4;UBERON:0001894,8.59e-11,7;UBERON:0006222,8.59e-11,7;UBERON:0002680,3.11e-08,9;UBERON:0001895,3.11e-08,9;UBERON:0010092,3.11e-08,9;UBERON:0001044,3.73e-08,6;UBERON:0003293,3.73e-08,6;UBERON:0003294,3.73e-08,6;UBERON:0010047,3.73e-08,6;UBERON:0000167,3.73e-08,6;UBERON:0001905,1.99e-07,2;UBERON:0002757,1.99e-07,2;UBERON:0010134,1.99e-07,2;UBERON:0005408,1.99e-07,2;UBERON:0001899,1.99e-07,2;UBERON:0002784,2.00e-07,4;UBERON:0000007,3.50e-07,2;UBERON:0007023,3.66e-07,114;UBERON:0003408,4.67e-07,10;UBERON:0001829,6.63e-07,2;UBERON:0002148,8.10e-07,2;UBERON:0006331,8.10e-07,2;UBERON:0009662,8.10e-07,2|phase1_expression=0.908391896352783,1.71280419112787,0.563817616383885,0,0,0,2.53299878168311,0,0.522371256399677,0.245733936501509,0,0.218441372130172,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.767175371061182,0,0,0.144846518960824,0,0,0,0,0.087834785693126,1.30979075497713,0.364295288292542,0.370784442784429,0,0,0,0,0,0,0,0,0,0,0,0,0.208994966536811,0,0,0.66944122552934,1.20848795132744,0.760272105718513,1.46437234528902,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132409180813219,0,0,0,0,0.49333509683432,0.933633106199299,0,0.163461903113459,0,0,0,0,0,0,0,0,0,0.61246251376468,0.122834317311768,0.103325781175765,0,0.247266929278557,0,0.718618141816238,0,0,0,0.438977620880838,0.612975591598039,0,0,0,0,0,0,0.103052529238439,0,0,0,0,0.252433774244115,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.38134921352481,0,0,0,0,0,0,0,0,0,0,0,0,2.80483547606892,0,0,0,0,0.590789906681404,0,0.122988438543114,0,0.109750285408626,0,0,0,0,1.03993478527958,0,0.231860809950154,0,0.577465791044295,1.85194205030644,0.570762456703795,0,0,0,0,0,0,0,0,12.985985791913,0.871901815541886,0,0,0,0,0.144119953416961,0.50496973370552,0,0,0,0,0,0,0,0,0,0.1466765716419,0,3.57656445851882,0,0.26593811658487,0,0,0,0.266422179016099,0.142977993658148,0,0,0.325736184293735,0,0,0.301439377059586,0,0,0,0,0,0,0,0,0.579125226670317,1.43833425785268,0.537182889719687,0,0,0,0,0,0,0,0,0,0,0,0,0,1.00034104211935,0,0,0,0,0,0,0,0,0,0,0.0868836144680828,0,0.686286847621712,0,0,0,0,0,0,0.992431231275107,2.30192959932094,1.40330047216537,0.384417447767103,0.511707249066704,0.160853921143607,0,0,0.355123450626254,1.06765302817952,0,0.929683027679674,0,0,0.184161977871793,0,0.182091168006717,0.131124414959424,0.451199612907412,0.15403067420883,0,0,0.211103257785751,0,0.340187410553031,0,0,0.270946437543853,2.00675909541941,1.27438136522519,0,0,0,0,0,0,0,0.206082023295445,0,0,0,0,0,0,0,0,0.275673144969061,0.966782203814463,0.290033387828457,0.0852266274161009,0,0,0,0,0,2.32422774648643,3.46293581513704,0,0,1.59691809095107,0,0,0,0,0.31637942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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=100506928 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |||
|TSSclassifier=S | |||
|UniProt=Q6ZWE2 | |||
|association_with_transcript=0bp_to_AK123224_5end | |||
|coexpression_cluster_id=C24 | |||
|description=CAGE_peak_1_at_LOC100506928_5end | |||
|id=chr16:30510842..30510881,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006215;4.62e-10;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.05e-18!115;UBERON:0004111!5.57e-11!241;UBERON:0001049!1.32e-10!57;UBERON:0005068!1.32e-10!57;UBERON:0006241!1.32e-10!57;UBERON:0007135!1.32e-10!57;UBERON:0000153!1.76e-10!129;UBERON:0007811!1.76e-10!129;UBERON:0000477!5.38e-10!286;UBERON:0000475!1.34e-09!365;UBERON:0000033!3.01e-09!123;UBERON:0004121!8.84e-09!169;UBERON:0000924!1.63e-08!173;UBERON:0006601!1.63e-08!173;UBERON:0002616!1.68e-08!59;UBERON:0003075!2.09e-08!86;UBERON:0007284!2.09e-08!86;UBERON:0000955!2.52e-08!69;UBERON:0006238!2.52e-08!69;UBERON:0002346!5.80e-08!90;UBERON:0001017!1.67e-07!82;UBERON:0005743!2.50e-07!86;UBERON:0000073!3.71e-07!94;UBERON:0001016!3.71e-07!94;UBERON:0001894!4.96e-07!7;UBERON:0006222!4.96e-07!7;UBERON:0000483!5.84e-07!309;UBERON:0000025!6.06e-07!194;UBERON:0000119!6.43e-07!312;UBERON:0001044!7.91e-07!6;UBERON:0003293!7.91e-07!6;UBERON:0003294!7.91e-07!6;UBERON:0010047!7.91e-07!6;UBERON:0000167!7.91e-07!6 | |||
|ontology_enrichment_uberon_v019=UBERON:0003296;5.93e-13;4!UBERON:0010133;5.93e-13;4!UBERON:0001894;1.13e-10;7!UBERON:0002680;3.00e-08;9!UBERON:0001895;3.00e-08;9!UBERON:0001044;3.38e-08;6!UBERON:0003293;3.38e-08;6!UBERON:0003294;3.38e-08;6!UBERON:0010047;3.38e-08;6!UBERON:0003408;3.38e-08;6!UBERON:0000167;3.38e-08;6!UBERON:0001905;1.98e-07;2!UBERON:0002757;1.98e-07;2!UBERON:0010134;1.98e-07;2!UBERON:0005408;1.98e-07;2!UBERON:0001899;1.98e-07;2!UBERON:0002784;2.70e-07;4!UBERON:0000007;3.43e-07;2!UBERON:0001829;6.06e-07;2!UBERON:0002148;7.51e-07;2!UBERON:0006331;7.51e-07;2!UBERON:0009662;7.51e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003296,6.07e-13,4;UBERON:0010133,6.07e-13,4;UBERON:0001894,8.59e-11,7;UBERON:0006222,8.59e-11,7;UBERON:0002680,3.11e-08,9;UBERON:0001895,3.11e-08,9;UBERON:0010092,3.11e-08,9;UBERON:0001044,3.73e-08,6;UBERON:0003293,3.73e-08,6;UBERON:0003294,3.73e-08,6;UBERON:0010047,3.73e-08,6;UBERON:0000167,3.73e-08,6;UBERON:0001905,1.99e-07,2;UBERON:0002757,1.99e-07,2;UBERON:0010134,1.99e-07,2;UBERON:0005408,1.99e-07,2;UBERON:0001899,1.99e-07,2;UBERON:0002784,2.00e-07,4;UBERON:0000007,3.50e-07,2;UBERON:0007023,3.66e-07,114;UBERON:0003408,4.67e-07,10;UBERON:0001829,6.63e-07,2;UBERON:0002148,8.10e-07,2;UBERON:0006331,8.10e-07,2;UBERON:0009662,8.10e-07,2 | |||
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| |||
|short_description=p1@LOC100506928 | |||
}} |
Revision as of 10:08, 11 September 2013
Short description: | p1@LOC100506928 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_LOC100506928_5end |
Coexpression cluster: | C24_pineal_eye_retina_retinoblastoma_medulloblastoma_small_cerebral |
Association with transcript: | 0bp_to_AK123224_5end |
EntrezGene: | LOC100506928 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
gland of diencephalon | 6.07e-13 | 4 |
neuroendocrine gland | 6.07e-13 | 4 |
diencephalon | 8.59e-11 | 7 |
future diencephalon | 8.59e-11 | 7 |
regional part of metencephalon | 3.11e-08 | 9 |
metencephalon | 3.11e-08 | 9 |
future metencephalon | 3.11e-08 | 9 |
saliva-secreting gland | 3.73e-08 | 6 |
gland of oral region | 3.73e-08 | 6 |
gland of foregut | 3.73e-08 | 6 |
oral gland | 3.73e-08 | 6 |
oral cavity | 3.73e-08 | 6 |
pineal body | 1.99e-07 | 2 |
regional part of epithalamus | 1.99e-07 | 2 |
secretory circumventricular organ | 1.99e-07 | 2 |
circumventricular organ | 1.99e-07 | 2 |
epithalamus | 1.99e-07 | 2 |
regional part of diencephalon | 2.00e-07 | 4 |
pituitary gland | 3.50e-07 | 2 |
adult organism | 3.66e-07 | 114 |
gland of gut | 4.67e-07 | 10 |
major salivary gland | 6.63e-07 | 2 |
locus ceruleus | 8.10e-07 | 2 |
brainstem nucleus | 8.10e-07 | 2 |
hindbrain nucleus | 8.10e-07 | 2 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.