FFCP PHASE1:Hg19::chr16:49733031..49733072,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=W|UniProt=NA|association_with_transcript=NA|coexpression_cluster_id=C85|description=CAGE_peak_at_chr16:49733031..49733072,-|id=chr16:49733031..49733072,-|ontology_enrichment_celltype=CL:0000133!3.40e-09!59;CL:0000393!7.59e-09!60;CL:0000211!7.59e-09!60;CL:0000221!1.78e-08!71;CL:0000680!5.54e-08!57;CL:0000056!5.54e-08!57;CL:0000355!5.54e-08!57;CL:0000128!1.38e-07!7;CL:0000126!1.38e-07!7;CL:0000127!1.38e-07!7;CL:0002453!1.38e-07!7;CL:0000055!1.67e-07!180;CL:0000569!2.96e-07!4;CL:0000011!2.96e-07!4;CL:0002319!7.94e-07!25|ontology_enrichment_celltype_v019=CL:0000569;5.82e-31;4!CL:0000333;7.56e-15;5!CL:0002321;5.63e-13;15!CL:0002494;7.26e-12;16!CL:0000222;2.30e-09;1!CL:0000511;5.97e-09;1!CL:0002625;5.97e-09;1!CL:0000216;5.97e-09;1|ontology_enrichment_celltype_v019_2=CL:0000569,1.48e-30,4;CL:0000011,1.48e-30,4;CL:0000333,3.99e-13,41;CL:0002494,9.50e-12,16;CL:0000511,3.88e-09,1;CL:0002625,3.88e-09,1;CL:0000216,3.88e-09,1;CL:0000133,7.42e-09,59;CL:0000221,4.58e-07,72|ontology_enrichment_development_v019=CL:0000011;5.82e-31;4|ontology_enrichment_disease=|ontology_enrichment_disease_v019=DOID:171;6.47e-13;10!DOID:169;1.83e-12;6|ontology_enrichment_disease_v019_2=DOID:171,6.59e-13,10;DOID:169,2.06e-12,6|ontology_enrichment_uberon=UBERON:0007100!1.97e-09!27;UBERON:0000481!4.51e-09!347;UBERON:0000948!2.65e-08!24;UBERON:0005498!2.65e-08!24;UBERON:0004140!2.65e-08!24;UBERON:0009881!2.65e-08!24;UBERON:0004141!2.65e-08!24;UBERON:0003084!2.65e-08!24;UBERON:0007005!2.65e-08!24;UBERON:0004139!2.65e-08!24;UBERON:0004291!2.65e-08!24;UBERON:0000119!3.13e-08!312;UBERON:0003103!5.24e-08!69;UBERON:0000924!8.68e-08!173;UBERON:0006601!8.68e-08!173;UBERON:0000483!1.29e-07!309;UBERON:0000914!1.46e-07!83;UBERON:0002329!1.46e-07!83;UBERON:0003077!1.46e-07!83;UBERON:0003059!1.46e-07!83;UBERON:0007282!1.46e-07!83;UBERON:0009618!1.46e-07!83;UBERON:0007285!1.46e-07!83;UBERON:0000477!3.65e-07!286;UBERON:0004121!4.08e-07!169;UBERON:0001134!4.85e-07!61;UBERON:0002036!4.85e-07!61;UBERON:0003082!4.85e-07!61|ontology_enrichment_uberon_v019=UBERON:0000013;7.56e-15;5!UBERON:0002410;7.56e-15;5!UBERON:0001136;5.97e-09;1!UBERON:0001343;5.97e-09;1!UBERON:0004910;5.97e-09;1!UBERON:0004813;5.97e-09;1!UBERON:0000948;1.40e-08;22!UBERON:0000010;1.80e-08;8!UBERON:0007100;1.58e-07;25|ontology_enrichment_uberon_v019_2=UBERON:0000013,8.73e-15,5;UBERON:0002410,8.73e-15,5;UBERON:0001136,3.88e-09,1;UBERON:0001343,3.88e-09,1;UBERON:0004910,3.88e-09,1;UBERON:0005154,3.88e-09,1;UBERON:0005295,3.88e-09,1;UBERON:0004813,3.88e-09,1;UBERON:0005297,3.88e-09,1;UBERON:0005294,3.88e-09,1;UBERON:0010141,3.88e-09,1;UBERON:0005891,3.88e-09,1;UBERON:0000010,1.94e-08,8;UBERON:0000948,8.96e-08,24;UBERON:0005498,8.96e-08,24;UBERON:0004140,8.96e-08,24;UBERON:0009881,8.96e-08,24;UBERON:0004141,8.96e-08,24;UBERON:0003084,8.96e-08,24;UBERON:0007005,8.96e-08,24;UBERON:0004139,8.96e-08,24;UBERON:0004291,8.96e-08,24;UBERON:0007100,6.89e-07,27|phase1_expression=0,0,0.563817616383885,0,0.893922188854576,0,0,0,0,1.72013755551056,0.697801167972428,0,0,0,0,0,0,0,0,0.492484232307152,0.408001382488506,0.626909442956176,1.14494394852423,0.821246550437305,0.87879847716362,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.756278537312543,0.665188192387692,0.351339142772504,0.130979075497713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.506522046658319,0,0,0,0,0,0,0.311211035399766,0.269421344139376,0.326923806226917,0.454072282934794,0,0,0,0,0,0,0,0,0,0,0,0,0.741800787835671,0.910161361938026,0,0.168336113954066,0.125118519871964,0,0.438977620880838,0.30648779579902,0.45071417671979,0.113432183160021,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.286804595389004,0,0,0,0,0,0,1.56449532329816,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171567810298526,0.109750285408626,0,0,0.185176890317059,0,0,0,0.115930404975077,0,0,0,0,0,0,0,0,0,0,0,0.283550194484773,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.784917590417525,0,0.22001485746285,0,0,0,0,0,0,0,0,0,0.542621605391443,0,0,0,0.791951872933429,0.301439377059586,0,0.099972991182057,0,0,0,0,0,0,0.144781306667579,0.410952645100767,1.07436577943937,0,0,0,0,0.508189248444927,0,0.773288812777695,0.335032530668698,0.637938751653163,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.368738337083406,0,0,0,0,0,0,0,0,0,0,0,0,0,0.511707249066704,0,0,0.154209693802656,0,0.0821271560138091,0,0,0,0,0,0.114814448164607,0.182091168006717,0,0,0,0,1.46139224653261,0.105551628892876,0,0,0,0,0,0,0,0.831076008928724,0,0,0,0,0,0,1.13345112812495,0,0,0,0,1.6068392984416,0.48335359146061,0,0.15350367472613,0,0.537101224341368,0.290033387828457,0.340906509664404,0.267096106940212,0,0,0,0,0,0.31481234683064,0,0,0,0,0.18532421910392,0.572499546967965,0,0.316379424718726,0,0.51179558262266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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=W | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C85 | |||
|description=CAGE_peak_at_chr16:49733031..49733072,- | |||
|id=chr16:49733031..49733072,- | |||
|ontology_enrichment_celltype=CL:0000133!3.40e-09!59;CL:0000393!7.59e-09!60;CL:0000211!7.59e-09!60;CL:0000221!1.78e-08!71;CL:0000680!5.54e-08!57;CL:0000056!5.54e-08!57;CL:0000355!5.54e-08!57;CL:0000128!1.38e-07!7;CL:0000126!1.38e-07!7;CL:0000127!1.38e-07!7;CL:0002453!1.38e-07!7;CL:0000055!1.67e-07!180;CL:0000569!2.96e-07!4;CL:0000011!2.96e-07!4;CL:0002319!7.94e-07!25 | |||
|ontology_enrichment_celltype_v019=CL:0000569;5.82e-31;4!CL:0000333;7.56e-15;5!CL:0002321;5.63e-13;15!CL:0002494;7.26e-12;16!CL:0000222;2.30e-09;1!CL:0000511;5.97e-09;1!CL:0002625;5.97e-09;1!CL:0000216;5.97e-09;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000569,1.48e-30,4;CL:0000011,1.48e-30,4;CL:0000333,3.99e-13,41;CL:0002494,9.50e-12,16;CL:0000511,3.88e-09,1;CL:0002625,3.88e-09,1;CL:0000216,3.88e-09,1;CL:0000133,7.42e-09,59;CL:0000221,4.58e-07,72 | |||
|ontology_enrichment_development_v019=CL:0000011;5.82e-31;4 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:171;6.47e-13;10!DOID:169;1.83e-12;6 | |||
|ontology_enrichment_disease_v019_2=DOID:171,6.59e-13,10;DOID:169,2.06e-12,6 | |||
|ontology_enrichment_uberon=UBERON:0007100!1.97e-09!27;UBERON:0000481!4.51e-09!347;UBERON:0000948!2.65e-08!24;UBERON:0005498!2.65e-08!24;UBERON:0004140!2.65e-08!24;UBERON:0009881!2.65e-08!24;UBERON:0004141!2.65e-08!24;UBERON:0003084!2.65e-08!24;UBERON:0007005!2.65e-08!24;UBERON:0004139!2.65e-08!24;UBERON:0004291!2.65e-08!24;UBERON:0000119!3.13e-08!312;UBERON:0003103!5.24e-08!69;UBERON:0000924!8.68e-08!173;UBERON:0006601!8.68e-08!173;UBERON:0000483!1.29e-07!309;UBERON:0000914!1.46e-07!83;UBERON:0002329!1.46e-07!83;UBERON:0003077!1.46e-07!83;UBERON:0003059!1.46e-07!83;UBERON:0007282!1.46e-07!83;UBERON:0009618!1.46e-07!83;UBERON:0007285!1.46e-07!83;UBERON:0000477!3.65e-07!286;UBERON:0004121!4.08e-07!169;UBERON:0001134!4.85e-07!61;UBERON:0002036!4.85e-07!61;UBERON:0003082!4.85e-07!61 | |||
|ontology_enrichment_uberon_v019=UBERON:0000013;7.56e-15;5!UBERON:0002410;7.56e-15;5!UBERON:0001136;5.97e-09;1!UBERON:0001343;5.97e-09;1!UBERON:0004910;5.97e-09;1!UBERON:0004813;5.97e-09;1!UBERON:0000948;1.40e-08;22!UBERON:0000010;1.80e-08;8!UBERON:0007100;1.58e-07;25 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000013,8.73e-15,5;UBERON:0002410,8.73e-15,5;UBERON:0001136,3.88e-09,1;UBERON:0001343,3.88e-09,1;UBERON:0004910,3.88e-09,1;UBERON:0005154,3.88e-09,1;UBERON:0005295,3.88e-09,1;UBERON:0004813,3.88e-09,1;UBERON:0005297,3.88e-09,1;UBERON:0005294,3.88e-09,1;UBERON:0010141,3.88e-09,1;UBERON:0005891,3.88e-09,1;UBERON:0000010,1.94e-08,8;UBERON:0000948,8.96e-08,24;UBERON:0005498,8.96e-08,24;UBERON:0004140,8.96e-08,24;UBERON:0009881,8.96e-08,24;UBERON:0004141,8.96e-08,24;UBERON:0003084,8.96e-08,24;UBERON:0007005,8.96e-08,24;UBERON:0004139,8.96e-08,24;UBERON:0004291,8.96e-08,24;UBERON:0007100,6.89e-07,27 | |||
|phase1_expression=0,0,0.563817616383885,0,0.893922188854576,0,0,0,0,1.72013755551056,0.697801167972428,0,0,0,0,0,0,0,0,0.492484232307152,0.408001382488506,0.626909442956176,1.14494394852423,0.821246550437305,0.87879847716362,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.756278537312543,0.665188192387692,0.351339142772504,0.130979075497713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.506522046658319,0,0,0,0,0,0,0.311211035399766,0.269421344139376,0.326923806226917,0.454072282934794,0,0,0,0,0,0,0,0,0,0,0,0,0.741800787835671,0.910161361938026,0,0.168336113954066,0.125118519871964,0,0.438977620880838,0.30648779579902,0.45071417671979,0.113432183160021,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.286804595389004,0,0,0,0,0,0,1.56449532329816,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171567810298526,0.109750285408626,0,0,0.185176890317059,0,0,0,0.115930404975077,0,0,0,0,0,0,0,0,0,0,0,0.283550194484773,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.784917590417525,0,0.22001485746285,0,0,0,0,0,0,0,0,0,0.542621605391443,0,0,0,0.791951872933429,0.301439377059586,0,0.099972991182057,0,0,0,0,0,0,0.144781306667579,0.410952645100767,1.07436577943937,0,0,0,0,0.508189248444927,0,0.773288812777695,0.335032530668698,0.637938751653163,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.368738337083406,0,0,0,0,0,0,0,0,0,0,0,0,0,0.511707249066704,0,0,0.154209693802656,0,0.0821271560138091,0,0,0,0,0,0.114814448164607,0.182091168006717,0,0,0,0,1.46139224653261,0.105551628892876,0,0,0,0,0,0,0,0.831076008928724,0,0,0,0,0,0,1.13345112812495,0,0,0,0,1.6068392984416,0.48335359146061,0,0.15350367472613,0,0.537101224341368,0.290033387828457,0.340906509664404,0.267096106940212,0,0,0,0,0,0.31481234683064,0,0,0,0,0.18532421910392,0.572499546967965,0,0.316379424718726,0,0.511795582622668,0,0.318203247925937,0,0,0,0,0.606547444719948,0,1.26377536871694,0,0.974853958525138,1.05650146756755,0,0,0,0.551365343546124,0,0.438450885253763,1.73632660280006,0,0,0.30982349809975,0,0.143411352204052,0.0982490410131212,0,0,0.211107635297664,0,0,0,0,0,0,0.470719003883896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.11125408127993,0.398495976502139,0,0,0,0,0,0,0,0,0.197286811273867,0,0,0,0,0,0,0,0,0,0,0,3.10269035917318,0,0.173624994933292,0,0,0,0.110579259931225,0,0,0,0,0,0,0,0,0.108647371922008,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.265372693510018,0,0,0,0,0.067401132980677,0,0,0,0,0,0,0,0.30607276163049,0.31593289814244,1.50323419414493,0.622129148383483,0,0,0,0,0,0,2.08271686002157,0,0,0.34945333648406,0,0,0,0,0.0969890164884194,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.600420288709789,0,0,0,0,0.279282401272254,0.458320848023367,0,0.399358000997982,0.429226048136571,0,0.134366944973453,0,0,0,0,0,0,0,0,0,0.160753148465019,0.137539436597234,0,0,0,0,0,0,0.314727528809989,0,0,0,0,0.662091970365432,0,0,0,0,0,0,0,0.113312091520126,0,0,0.129282956361551,0,0,0,1.38823636338003,0.471612915298998,0,0,0,0,0,0,0.2506898940227,0,0,0,0,0,0,0,0.221858103073705,0.124192805882767,0,0,0,0,0,0,0.144921028610825,0.298509605773748,0.233713309847224,0,0,0.251567901752575,0,1.14420034198462,1.20984739010591,2.17612080815893,1.03498604992744,0,0,0,0,0,0,0,0.380805212168795,0.406870733204662,0,0.107410557042488,0,0,0,0,0,2.52369796457302,0,0,0,0,0,0,0,0,0.438568099157414,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,20.3352050372806,2.58779547352036,0,0.764467467344097,0.678930119816101,0,2.97445834221605,1.11728983594649,0.318004350653419,0,0,0,0,0.0642292250964595,0,0,0,0.252071696221718,0.0691572524642179,0,0,0,0,0,0,0,0,0.397832444232549,0.752103283492572,0,0,0,0,0,0,0,0,0,1.09394961803644,0.548257766857182,0,0,0,0,0,0,0.227662191351298,0.0887023701626388,0,0,0,0,0,0,0.078493092850514,0,0,0,0,0,0.214429632529969,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.335566295393377,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.89325874631822,0,0.436350690340377,0,0,0,0,0,0.546327859818478,0,0,0,0,0,0.606229585745915,0.267964130156178,0,0,0.213233981900981,0.476128862927481,0,0,0,0.12729431655633,0,0.217716747896961,0,0,0.215166616178029,0,0,0,0,0,0,0.611207220914332,0,0.665756774185513,0,0 | |||
|short_description=p@chr16:49733031..49733072,- | |||
}} |
Revision as of 10:35, 11 September 2013
Short description: | p@chr16:49733031..49733072, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr16:49733031..49733072, - |
Coexpression cluster: | C85_neuroblastoma_carcinoid_retinoblastoma_small_pineal_rhabdomyosarcoma_medulloblastoma |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
cardiac mesenchymal cell | 1.48e-30 | 4 |
migratory trunk neural crest cell | 1.48e-30 | 4 |
migratory neural crest cell | 3.99e-13 | 41 |
cardiocyte | 9.50e-12 | 16 |
androgen binding protein secreting cell | 3.88e-09 | 1 |
seminiferous tubule epithelial cell | 3.88e-09 | 1 |
Sertoli cell | 3.88e-09 | 1 |
neurectodermal cell | 7.42e-09 | 59 |
ectodermal cell | 4.58e-07 | 72 |
Ontology term | p-value | n |
---|---|---|
sympathetic nervous system | 8.73e-15 | 5 |
autonomic nervous system | 8.73e-15 | 5 |
mesothelium | 3.88e-09 | 1 |
seminiferous tubule of testis | 3.88e-09 | 1 |
epithelium of male gonad | 3.88e-09 | 1 |
epithelial cord | 3.88e-09 | 1 |
sex cord | 3.88e-09 | 1 |
seminiferous tubule epithelium | 3.88e-09 | 1 |
testis sex cord | 3.88e-09 | 1 |
genital ridge | 3.88e-09 | 1 |
primitive sex cord of indifferent gonad | 3.88e-09 | 1 |
coelomic epithelium | 3.88e-09 | 1 |
peripheral nervous system | 1.94e-08 | 8 |
heart | 8.96e-08 | 24 |
primitive heart tube | 8.96e-08 | 24 |
primary heart field | 8.96e-08 | 24 |
anterior lateral plate mesoderm | 8.96e-08 | 24 |
heart tube | 8.96e-08 | 24 |
heart primordium | 8.96e-08 | 24 |
cardiac mesoderm | 8.96e-08 | 24 |
cardiogenic plate | 8.96e-08 | 24 |
heart rudiment | 8.96e-08 | 24 |
primary circulatory organ | 6.89e-07 | 27 |
Ontology term | p-value | n |
---|---|---|
neuroectodermal tumor | 6.59e-13 | 10 |
neuroendocrine tumor | 2.06e-12 | 6 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.